RNA–Protein interactions for RNA: ENST00000342310.7

LMX1A-202, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-202ENST00000342310 RFC5P40937 340 aa13.02□□□□□ -0.32
LMX1A-202ENST00000342310 ADCYAP1R1P41586 468 aa13.02□□□□□ -0.32
LMX1A-202ENST00000342310 SNRPFP62306 86 aaKnown RBP13.02□□□□□ -0.32
LMX1A-202ENST00000342310 SLC25A3Q00325 362 aa13.02□□□□□ -0.32
LMX1A-202ENST00000342310 GEN1Q17RS7 908 aa13.02□□□□□ -0.32
LMX1A-202ENST00000342310 PPM1JQ5JR12 505 aa13.02□□□□□ -0.32
LMX1A-202ENST00000342310 KCNT2Q6UVM3 1135 aa13.02□□□□□ -0.32
LMX1A-202ENST00000342310 CCNYL1Q8N7R7 359 aa13.02□□□□□ -0.32
LMX1A-202ENST00000342310 GRAMD1AQ96CP6 724 aa13.02□□□□□ -0.32
LMX1A-202ENST00000342310 ZNF570Q96NI8 536 aa13.02□□□□□ -0.32
LMX1A-202ENST00000342310 SNX25Q9H3E2 840 aa13.02□□□□□ -0.32
LMX1A-202ENST00000342310 PIN4Q9Y237 131 aaKnown RBP13.02□□□□□ -0.32
LMX1A-202ENST00000342310 E9PBE3 544 aa13.02□□□□□ -0.33
LMX1A-202ENST00000342310 NFKBIEO00221 500 aa13.02□□□□□ -0.33
LMX1A-202ENST00000342310 CLDN5O00501 218 aa13.02□□□□□ -0.33
LMX1A-202ENST00000342310 DYNC1LI2O43237 492 aaPredicted RBP13.02□□□□□ -0.33
LMX1A-202ENST00000342310 KLHL41O60662 606 aa13.02□□□□□ -0.33
LMX1A-202ENST00000342310 MOCS2O96007 188 aaPredicted RBP13.02□□□□□ -0.33
LMX1A-202ENST00000342310 ERVK-10P10266 1014 aa13.02□□□□□ -0.33
LMX1A-202ENST00000342310 ZRSR2Q15696 482 aaKnown RBP13.02□□□□□ -0.33
LMX1A-202ENST00000342310 TCHHL1Q5QJ38 904 aaPredicted RBP13.02□□□□□ -0.33
LMX1A-202ENST00000342310 MAP1SQ66K74 1059 aaPredicted RBP13.02□□□□□ -0.33
LMX1A-202ENST00000342310 PMF1Q6P1K2 205 aa13.02□□□□□ -0.33
LMX1A-202ENST00000342310 METTL7BQ6UX53 244 aa13.02□□□□□ -0.33
LMX1A-202ENST00000342310 CLNKQ7Z7G1 428 aa13.02□□□□□ -0.33
LMX1A-202ENST00000342310 GBP5Q96PP8 586 aa13.02□□□□□ -0.33
LMX1A-202ENST00000342310 PCYT2Q99447 389 aa13.02□□□□□ -0.33
LMX1A-202ENST00000342310 ST6GALNAC4Q9H4F1 302 aa13.02□□□□□ -0.33
LMX1A-202ENST00000342310 LRRC4Q9HBW1 653 aa13.02□□□□□ -0.33
LMX1A-202ENST00000342310 SHOC2Q9UQ13 582 aa13.02□□□□□ -0.33
LMX1A-202ENST00000342310 ONECUT3O60422 494 aaPredicted RBP13.01□□□□□ -0.33
LMX1A-202ENST00000342310 MSCO60682 206 aa13.01□□□□□ -0.33
LMX1A-202ENST00000342310 KRT38O76015 456 aa13.01□□□□□ -0.33
LMX1A-202ENST00000342310 GNAT1P11488 350 aa13.01□□□□□ -0.33
LMX1A-202ENST00000342310 CMC1Q7Z7K0 106 aa13.01□□□□□ -0.33
LMX1A-202ENST00000342310 AZIN2Q96A70 460 aa13.01□□□□□ -0.33
LMX1A-202ENST00000342310 CXCL16Q9H2A7 254 aa13.01□□□□□ -0.33
LMX1A-202ENST00000342310 RSAD1Q9HA92 442 aa13.01□□□□□ -0.33
LMX1A-202ENST00000342310 ZFATQ9P243 1243 aa13.01□□□□□ -0.33
LMX1A-202ENST00000342310 WASF2Q9Y6W5 498 aa13.01□□□□□ -0.33
LMX1A-202ENST00000342310 CNTNAP2Q9UHC6 1331 aa13.01□□□□□ -0.33
LMX1A-202ENST00000342310 ITKQ08881 620 aa13.01□□□□□ -0.33
LMX1A-202ENST00000342310 SNX30Q5VWJ9 437 aa13.01□□□□□ -0.33
LMX1A-202ENST00000342310 PYDC1Q8WXC3 89 aa13.01□□□□□ -0.33
LMX1A-202ENST00000342310 EDEM1Q92611 657 aa13.01□□□□□ -0.33
LMX1A-202ENST00000342310 NSL1Q96IY1 281 aa13.01□□□□□ -0.33
LMX1A-202ENST00000342310 CELF6Q96J87 481 aaKnown RBP13.01□□□□□ -0.33
LMX1A-202ENST00000342310 PEBP4Q96S96 227 aa13.01□□□□□ -0.33
LMX1A-202ENST00000342310 SNRNP25Q9BV90 132 aaKnown RBP13.01□□□□□ -0.33
LMX1A-202ENST00000342310 TRIM4Q9C037 500 aa13.01□□□□□ -0.33
LMX1A-202ENST00000342310 TSR3Q9UJK0 312 aaKnown RBP13.01□□□□□ -0.33
LMX1A-202ENST00000342310 GGA2Q9UJY4 613 aa13.01□□□□□ -0.33
LMX1A-202ENST00000342310 CCDC22O60826 627 aa13.01□□□□□ -0.33
LMX1A-202ENST00000342310 TRPA1O75762 1119 aa13.01□□□□□ -0.33
LMX1A-202ENST00000342310 SNRPAP09012 282 aaKnown RBP13.01□□□□□ -0.33
LMX1A-202ENST00000342310 ARL2P36404 184 aa13.01□□□□□ -0.33
LMX1A-202ENST00000342310 STX3Q13277 289 aa13.01□□□□□ -0.33
LMX1A-202ENST00000342310 EMC10Q5UCC4 262 aa13.01□□□□□ -0.33
LMX1A-202ENST00000342310 XYLT1Q86Y38 959 aa13.01□□□□□ -0.33
LMX1A-202ENST00000342310 PNPLA1Q8N8W4 532 aa13.01□□□□□ -0.33
LMX1A-202ENST00000342310 ATP2A3Q93084 1043 aa13.01□□□□□ -0.33
LMX1A-202ENST00000342310 KLRG1Q96E93 195 aa13.01□□□□□ -0.33
LMX1A-202ENST00000342310 MRPL45Q9BRJ2 306 aaKnown RBP13.01□□□□□ -0.33
LMX1A-202ENST00000342310 DPEP3Q9H4B8 488 aa13.01□□□□□ -0.33
LMX1A-202ENST00000342310 TXNRD2Q9NNW7 524 aa13.01□□□□□ -0.33
LMX1A-202ENST00000342310 SIGLEC16A6NMB1 481 aa13□□□□□ -0.33
LMX1A-202ENST00000342310 C19orf81C9J6K1 198 aa13□□□□□ -0.33
LMX1A-202ENST00000342310 AIM2O14862 343 aa13□□□□□ -0.33
LMX1A-202ENST00000342310 NVLO15381 856 aaKnown RBP13□□□□□ -0.33
LMX1A-202ENST00000342310 ZWINTO95229 277 aa13□□□□□ -0.33
LMX1A-202ENST00000342310 IQCF3P0C7M6 154 aa13□□□□□ -0.33
LMX1A-202ENST00000342310 ARF4P18085 180 aaPredicted RBP13□□□□□ -0.33
LMX1A-202ENST00000342310 CYP2F1P24903 491 aa13□□□□□ -0.33
LMX1A-202ENST00000342310 SEPT6Q14141 434 aa13□□□□□ -0.33
LMX1A-202ENST00000342310 RABGAP1LQ5R372 815 aa13□□□□□ -0.33
LMX1A-202ENST00000342310 ARFGAP1Q8N6T3 406 aa13□□□□□ -0.33
LMX1A-202ENST00000342310 RDM1Q8NG50 284 aa13□□□□□ -0.33
LMX1A-202ENST00000342310 MARK4Q96L34 752 aa13□□□□□ -0.33
LMX1A-202ENST00000342310 EBF4Q9BQW3 602 aa13□□□□□ -0.33
LMX1A-202ENST00000342310 DNAJC16Q9Y2G8 782 aa13□□□□□ -0.33
LMX1A-202ENST00000342310 SLC4A7Q9Y6M7 1214 aa13□□□□□ -0.33
LMX1A-202ENST00000342310 DNAJC6O75061 913 aa13□□□□□ -0.33
LMX1A-202ENST00000342310 GOT1P17174 413 aa13□□□□□ -0.33
LMX1A-202ENST00000342310 MGAT1P26572 445 aa13□□□□□ -0.33
LMX1A-202ENST00000342310 MCL1Q07820 350 aa13□□□□□ -0.33
LMX1A-202ENST00000342310 CUL3Q13618 768 aa13□□□□□ -0.33
LMX1A-202ENST00000342310 TTLL4Q14679 1199 aa13□□□□□ -0.33
LMX1A-202ENST00000342310 TWF2Q6IBS0 349 aaKnown RBP13□□□□□ -0.33
LMX1A-202ENST00000342310 AGGF1Q8N302 714 aaeCLIP13□□□□□ -0.33
LMX1A-202ENST00000342310 RYBPQ8N488 228 aaPredicted RBP13□□□□□ -0.33
LMX1A-202ENST00000342310 SLC4A11Q8NBS3 891 aa13□□□□□ -0.33
LMX1A-202ENST00000342310 PIP4K2CQ8TBX8 421 aa13□□□□□ -0.33
LMX1A-202ENST00000342310 RPS6KL1Q9Y6S9 549 aa13□□□□□ -0.33
LMX1A-202ENST00000342310 SPECC1L-ADORA2AF8WAN1 911 aa13□□□□□ -0.33
LMX1A-202ENST00000342310 APOC4-APOC2K7ER74 178 aa13□□□□□ -0.33
LMX1A-202ENST00000342310 ACKR2O00590 384 aa13□□□□□ -0.33
LMX1A-202ENST00000342310 APOC2P02655 101 aa13□□□□□ -0.33
LMX1A-202ENST00000342310 HOXC6P09630 235 aa13□□□□□ -0.33
LMX1A-202ENST00000342310 EIF4BP23588 611 aaKnown RBP13□□□□□ -0.33
LMX1A-202ENST00000342310 ASPAP45381 313 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms