RNA–Protein interactions for RNA: ENST00000341491.8

ATF3-202, Transcript of activating transcription factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATF3, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-202ENST00000341491 TFDP3Q5H9I0 405 aa14.3□□□□□ -0.12
ATF3-202ENST00000341491 C1orf228Q6PIY5 440 aa14.3□□□□□ -0.12
ATF3-202ENST00000341491 RNF19BQ6ZMZ0 732 aa14.3□□□□□ -0.12
ATF3-202ENST00000341491 AENQ8WTP8 325 aaKnown RBP14.3□□□□□ -0.12
ATF3-202ENST00000341491 C11orf84Q9BUA3 381 aaPredicted RBP14.3□□□□□ -0.12
ATF3-202ENST00000341491 TMEM106CQ9BVX2 250 aa14.3□□□□□ -0.12
ATF3-202ENST00000341491 MCOLN1Q9GZU1 580 aa14.3□□□□□ -0.12
ATF3-202ENST00000341491 DHX35Q9H5Z1 703 aaKnown RBP14.3□□□□□ -0.12
ATF3-202ENST00000341491 PIGVQ9NUD9 493 aa14.3□□□□□ -0.12
ATF3-202ENST00000341491 NUP205Q92621 2012 aa14.3□□□□□ -0.12
ATF3-202ENST00000341491 M0QYT0 321 aa14.29□□□□□ -0.12
ATF3-202ENST00000341491 HSF2BPO75031 334 aa14.29□□□□□ -0.12
ATF3-202ENST00000341491 DAB1O75553 588 aa14.29□□□□□ -0.12
ATF3-202ENST00000341491 ZBED1O96006 694 aa14.29□□□□□ -0.12
ATF3-202ENST00000341491 DNAJB2P25686 324 aa14.29□□□□□ -0.12
ATF3-202ENST00000341491 MATKP42679 507 aa14.29□□□□□ -0.12
ATF3-202ENST00000341491 YWHAZP63104 245 aaKnown RBP14.29□□□□□ -0.12
ATF3-202ENST00000341491 KRT81Q14533 505 aa14.29□□□□□ -0.12
ATF3-202ENST00000341491 CYP1B1Q16678 543 aa14.29□□□□□ -0.12
ATF3-202ENST00000341491 GLE1Q53GS7 698 aaKnown RBP14.29□□□□□ -0.12
ATF3-202ENST00000341491 RAB41Q5JT25 222 aa14.29□□□□□ -0.12
ATF3-202ENST00000341491 LRRC38Q5VT99 294 aa14.29□□□□□ -0.12
ATF3-202ENST00000341491 CCDC26Q8TAB7 109 aa14.29□□□□□ -0.12
ATF3-202ENST00000341491 KCTD13Q8WZ19 329 aa14.29□□□□□ -0.12
ATF3-202ENST00000341491 PWWP2AQ96N64 755 aa14.29□□□□□ -0.12
ATF3-202ENST00000341491 KCTD15Q96SI1 283 aaPredicted RBP14.29□□□□□ -0.12
ATF3-202ENST00000341491 DDX23Q9BUQ8 820 aaKnown RBP14.29□□□□□ -0.12
ATF3-202ENST00000341491 PLVAPQ9BX97 442 aa14.29□□□□□ -0.12
ATF3-202ENST00000341491 CSNK1G1Q9HCP0 422 aa14.29□□□□□ -0.12
ATF3-202ENST00000341491 DNAJC17Q9NVM6 304 aaKnown RBP14.29□□□□□ -0.12
ATF3-202ENST00000341491 TMEM51Q9NW97 253 aa14.29□□□□□ -0.12
ATF3-202ENST00000341491 NR2E3Q9Y5X4 410 aa14.29□□□□□ -0.12
ATF3-202ENST00000341491 SF3B1O75533 1304 aaKnown RBP eCLIP14.29□□□□□ -0.124e-7■■■■■ 40.1
ATF3-202ENST00000341491 SHROOM3Q8TF72 1996 aa14.29□□□□□ -0.12
ATF3-202ENST00000341491 CHD9Q3L8U1 2897 aa14.29□□□□□ -0.12
ATF3-202ENST00000341491 REV3LO60673 3130 aa14.29□□□□□ -0.12
ATF3-202ENST00000341491 OAZ2O95190 189 aa14.29□□□□□ -0.12
ATF3-202ENST00000341491 KRT7P08729 469 aa14.29□□□□□ -0.12
ATF3-202ENST00000341491 CHRNA3P32297 505 aa14.29□□□□□ -0.12
ATF3-202ENST00000341491 PCK1P35558 622 aa14.29□□□□□ -0.12
ATF3-202ENST00000341491 EPHB4P54760 987 aa14.29□□□□□ -0.12
ATF3-202ENST00000341491 OTUD4Q01804 1114 aaKnown RBP14.29□□□□□ -0.12
ATF3-202ENST00000341491 SLC20A2Q08357 652 aa14.29□□□□□ -0.12
ATF3-202ENST00000341491 CASP8Q14790 479 aa14.29□□□□□ -0.12
ATF3-202ENST00000341491 C16orf59Q7L2K0 433 aa14.29□□□□□ -0.12
ATF3-202ENST00000341491 POLNQ7Z5Q5 900 aa14.29□□□□□ -0.12
ATF3-202ENST00000341491 ZDHHC17Q8IUH5 632 aa14.29□□□□□ -0.12
ATF3-202ENST00000341491 IFT20Q8IY31 132 aa14.29□□□□□ -0.12
ATF3-202ENST00000341491 SEPT5Q99719 369 aaPredicted RBP14.29□□□□□ -0.12
ATF3-202ENST00000341491 TMEM121Q9BTD3 319 aa14.29□□□□□ -0.12
ATF3-202ENST00000341491 COLEC11Q9BWP8 271 aa14.29□□□□□ -0.12
ATF3-202ENST00000341491 DNAI2Q9GZS0 605 aa14.29□□□□□ -0.12
ATF3-202ENST00000341491 PCDH18Q9HCL0 1135 aa14.29□□□□□ -0.12
ATF3-202ENST00000341491 DDX56Q9NY93 547 aaKnown RBP14.29□□□□□ -0.12
ATF3-202ENST00000341491 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.29□□□□□ -0.12
ATF3-202ENST00000341491 CDY1Q9Y6F8 540 aa14.29□□□□□ -0.12
ATF3-202ENST00000341491 PLXNA4Q9HCM2 1894 aa14.28□□□□□ -0.12
ATF3-202ENST00000341491 CEP290O15078 2479 aa14.28□□□□□ -0.12
ATF3-202ENST00000341491 CAPN9O14815 690 aa14.28□□□□□ -0.12
ATF3-202ENST00000341491 MSI1O43347 362 aaKnown RBP14.28□□□□□ -0.12
ATF3-202ENST00000341491 ERLIN1O75477 346 aa14.28□□□□□ -0.12
ATF3-202ENST00000341491 LTFP02788 710 aa14.28□□□□□ -0.12
ATF3-202ENST00000341491 FAM163BP0C2L3 166 aa14.28□□□□□ -0.12
ATF3-202ENST00000341491 FGFR3P22607 806 aa14.28□□□□□ -0.12
ATF3-202ENST00000341491 GDF10P55107 478 aa14.28□□□□□ -0.12
ATF3-202ENST00000341491 PPP1R7Q15435 360 aa14.28□□□□□ -0.12
ATF3-202ENST00000341491 EFHC1Q5JVL4 640 aa14.28□□□□□ -0.12
ATF3-202ENST00000341491 ACTL9Q8TC94 416 aa14.28□□□□□ -0.12
ATF3-202ENST00000341491 RIN2Q8WYP3 895 aaPredicted RBP14.28□□□□□ -0.12
ATF3-202ENST00000341491 LRRC19Q9H756 370 aa14.28□□□□□ -0.12
ATF3-202ENST00000341491 POPDC2Q9HBU9 364 aa14.28□□□□□ -0.12
ATF3-202ENST00000341491 ETNK2Q9NVF9 386 aa14.28□□□□□ -0.12
ATF3-202ENST00000341491 OSER1Q9NX31 292 aa14.28□□□□□ -0.12
ATF3-202ENST00000341491 CXXC1Q9P0U4 656 aaPredicted RBP14.28□□□□□ -0.12
ATF3-202ENST00000341491 AP4E1Q9UPM8 1137 aa14.28□□□□□ -0.12
ATF3-202ENST00000341491 UTP11Q9Y3A2 253 aaKnown RBP14.28□□□□□ -0.12
ATF3-202ENST00000341491 MYO18AQ92614 2054 aaKnown RBP14.28□□□□□ -0.12
ATF3-202ENST00000341491 PLXNA3P51805 1871 aa14.28□□□□□ -0.12
ATF3-202ENST00000341491 DOCK6Q96HP0 2047 aa14.28□□□□□ -0.12
ATF3-202ENST00000341491 MDM4O15151 490 aa14.27□□□□□ -0.12
ATF3-202ENST00000341491 TRAPPC3O43617 180 aa14.27□□□□□ -0.12
ATF3-202ENST00000341491 LIASO43766 372 aa14.27□□□□□ -0.12
ATF3-202ENST00000341491 IL4RP24394 825 aa14.27□□□□□ -0.12
ATF3-202ENST00000341491 PTPN9P43378 593 aa14.27□□□□□ -0.12
ATF3-202ENST00000341491 ARSEP51690 589 aa14.27□□□□□ -0.12
ATF3-202ENST00000341491 TUBB4BP68371 445 aa14.27□□□□□ -0.12
ATF3-202ENST00000341491 SYCP2LQ5T4T6 812 aa14.27□□□□□ -0.12
ATF3-202ENST00000341491 DUPD1Q68J44 220 aa14.27□□□□□ -0.12
ATF3-202ENST00000341491 ZNF280DQ6N043 979 aa14.27□□□□□ -0.12
ATF3-202ENST00000341491 MAATS1Q7Z4T9 603 aa14.27□□□□□ -0.12
ATF3-202ENST00000341491 SPRED2Q7Z698 418 aa14.27□□□□□ -0.12
ATF3-202ENST00000341491 TAC4Q86UU9 113 aa14.27□□□□□ -0.12
ATF3-202ENST00000341491 ZC3H18Q86VM9 953 aaKnown RBP14.27□□□□□ -0.12
ATF3-202ENST00000341491 C12orf50Q8NA57 414 aaPredicted RBP14.27□□□□□ -0.12
ATF3-202ENST00000341491 ANKLE1Q8NAG6 615 aa14.27□□□□□ -0.12
ATF3-202ENST00000341491 CMASQ8NFW8 434 aaPredicted RBP14.27□□□□□ -0.12
ATF3-202ENST00000341491 GIPC2Q8TF65 315 aa14.27□□□□□ -0.12
ATF3-202ENST00000341491 BADQ92934 168 aa14.27□□□□□ -0.12
ATF3-202ENST00000341491 TOP1MTQ969P6 601 aa14.27□□□□□ -0.12
ATF3-202ENST00000341491 SLC2A13Q96QE2 648 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms