RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 TSPAN16Q9UKR8 245 aa15.66■□□□□ 0.1
TPM3-208ENST00000341485 ZMYND8Q9ULU4 1186 aaPredicted RBP15.66■□□□□ 0.1
TPM3-208ENST00000341485 PDCD11Q14690 1871 aaKnown RBP15.66■□□□□ 0.1
TPM3-208ENST00000341485 ARVCFO00192 962 aa15.65■□□□□ 0.1
TPM3-208ENST00000341485 TMEM63AO94886 807 aa15.65■□□□□ 0.1
TPM3-208ENST00000341485 ENDOD1O94919 500 aa15.65■□□□□ 0.1
TPM3-208ENST00000341485 ARL4CP56559 192 aa15.65■□□□□ 0.1
TPM3-208ENST00000341485 XRCC4Q13426 336 aa15.65■□□□□ 0.1
TPM3-208ENST00000341485 C15orf59Q2T9L4 293 aaPredicted RBP15.65■□□□□ 0.1
TPM3-208ENST00000341485 XKR4Q5GH76 650 aa15.65■□□□□ 0.1
TPM3-208ENST00000341485 EFHC2Q5JST6 749 aa15.65■□□□□ 0.1
TPM3-208ENST00000341485 C9orf57Q5W0N0 161 aa15.65■□□□□ 0.1
TPM3-208ENST00000341485 NPNTQ6UXI9 565 aa15.65■□□□□ 0.1
TPM3-208ENST00000341485 SPATA21Q7Z572 469 aa15.65■□□□□ 0.1
TPM3-208ENST00000341485 LRRC52Q8N7C0 313 aa15.65■□□□□ 0.1
TPM3-208ENST00000341485 FAM71DQ8N9W8 422 aa15.65■□□□□ 0.1
TPM3-208ENST00000341485 DENND1AQ8TEH3 1009 aa15.65■□□□□ 0.1
TPM3-208ENST00000341485 SGSM3Q96HU1 749 aa15.65■□□□□ 0.1
TPM3-208ENST00000341485 CNPY3Q9BT09 278 aa15.65■□□□□ 0.1
TPM3-208ENST00000341485 PHACTR1Q9C0D0 580 aa15.65■□□□□ 0.1
TPM3-208ENST00000341485 KLC4Q9NSK0 619 aa15.65■□□□□ 0.1
TPM3-208ENST00000341485 SCN1AP35498 2009 aa15.65■□□□□ 0.1
TPM3-208ENST00000341485 PPEF2O14830 753 aa15.64■□□□□ 0.09
TPM3-208ENST00000341485 PRPF4O43172 522 aaKnown RBP eCLIP15.64■□□□□ 0.09
TPM3-208ENST00000341485 SUN1O94901 812 aa15.64■□□□□ 0.09
TPM3-208ENST00000341485 RBP3P10745 1247 aa15.64■□□□□ 0.09
TPM3-208ENST00000341485 CKBP12277 381 aa15.64■□□□□ 0.09
TPM3-208ENST00000341485 IBSPP21815 317 aaPredicted RBP15.64■□□□□ 0.09
TPM3-208ENST00000341485 NRLP54845 237 aa15.64■□□□□ 0.09
TPM3-208ENST00000341485 CDH6P55285 790 aa15.64■□□□□ 0.09
TPM3-208ENST00000341485 GOLGA7BQ2TAP0 167 aa15.64■□□□□ 0.09
TPM3-208ENST00000341485 FUKQ8N0W3 1084 aa15.64■□□□□ 0.09
TPM3-208ENST00000341485 TTC39CQ8N584 583 aa15.64■□□□□ 0.09
TPM3-208ENST00000341485 C12orf29Q8N999 325 aa15.64■□□□□ 0.09
TPM3-208ENST00000341485 SLC43A3Q8NBI5 491 aa15.64■□□□□ 0.09
TPM3-208ENST00000341485 MRRFQ96E11 262 aaKnown RBP15.64■□□□□ 0.09
TPM3-208ENST00000341485 ZNF560Q96MR9 790 aa15.64■□□□□ 0.09
TPM3-208ENST00000341485 NT5C1AQ9BXI3 368 aa15.64■□□□□ 0.09
TPM3-208ENST00000341485 RSAD1Q9HA92 442 aa15.64■□□□□ 0.09
TPM3-208ENST00000341485 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.64■□□□□ 0.09
TPM3-208ENST00000341485 PRKAG3Q9UGI9 489 aa15.64■□□□□ 0.09
TPM3-208ENST00000341485 SLC24A2Q9UI40 661 aa15.64■□□□□ 0.09
TPM3-208ENST00000341485 RABGEF1Q9UJ41 708 aa15.64■□□□□ 0.09
TPM3-208ENST00000341485 SNX9Q9Y5X1 595 aa15.64■□□□□ 0.09
TPM3-208ENST00000341485 E7ESA3 106 aa15.64■□□□□ 0.09
TPM3-208ENST00000341485 MCF2LO15068 1137 aa15.64■□□□□ 0.09
TPM3-208ENST00000341485 GRAP2O75791 330 aa15.64■□□□□ 0.09
TPM3-208ENST00000341485 ASMTLO95671 621 aa15.64■□□□□ 0.09
TPM3-208ENST00000341485 PDGFRAP16234 1089 aa15.64■□□□□ 0.09
TPM3-208ENST00000341485 KRT15P19012 456 aa15.64■□□□□ 0.09
TPM3-208ENST00000341485 RAB27AP51159 221 aa15.64■□□□□ 0.09
TPM3-208ENST00000341485 IL9RQ01113 521 aa15.64■□□□□ 0.09
TPM3-208ENST00000341485 EFTUD2Q15029 972 aaKnown RBP eCLIP15.64■□□□□ 0.092e-18■■■■□ 20.8
TPM3-208ENST00000341485 RASA2Q15283 850 aa15.64■□□□□ 0.09
TPM3-208ENST00000341485 FAM133BQ5BKY9 247 aaKnown RBP15.64■□□□□ 0.09
TPM3-208ENST00000341485 PYROXD1Q8WU10 500 aa15.64■□□□□ 0.09
TPM3-208ENST00000341485 DEFB118Q96PH6 123 aa15.64■□□□□ 0.09
TPM3-208ENST00000341485 PPCSQ9HAB8 311 aa15.64■□□□□ 0.09
TPM3-208ENST00000341485 PSMC3IPQ9P2W1 217 aaPredicted RBP15.64■□□□□ 0.09
TPM3-208ENST00000341485 GGT7Q9UJ14 662 aa15.64■□□□□ 0.09
TPM3-208ENST00000341485 KIAA1257Q9ULG3 409 aa15.64■□□□□ 0.09
TPM3-208ENST00000341485 UBOX5O94941 541 aa15.63■□□□□ 0.09
TPM3-208ENST00000341485 SSTR1P30872 391 aa15.63■□□□□ 0.09
TPM3-208ENST00000341485 MLH1P40692 756 aa15.63■□□□□ 0.09
TPM3-208ENST00000341485 RGS7P49802 495 aa15.63■□□□□ 0.09
TPM3-208ENST00000341485 DPYSL3Q14195 570 aa15.63■□□□□ 0.09
TPM3-208ENST00000341485 NOMO1Q15155 1222 aa15.63■□□□□ 0.09
TPM3-208ENST00000341485 C4orf33Q8N1A6 199 aa15.63■□□□□ 0.09
TPM3-208ENST00000341485 ATP11CQ8NB49 1132 aa15.63■□□□□ 0.09
TPM3-208ENST00000341485 SPATA18Q8TC71 538 aa15.63■□□□□ 0.09
TPM3-208ENST00000341485 LPPQ93052 612 aa15.63■□□□□ 0.09
TPM3-208ENST00000341485 PAIP2Q9BPZ3 127 aaKnown RBP15.63■□□□□ 0.09
TPM3-208ENST00000341485 MRPL45Q9BRJ2 306 aaKnown RBP15.63■□□□□ 0.09
TPM3-208ENST00000341485 FAM124BQ9H5Z6 455 aaPredicted RBP15.63■□□□□ 0.09
TPM3-208ENST00000341485 ARL2BPQ9Y2Y0 163 aa15.63■□□□□ 0.09
TPM3-208ENST00000341485 SQORQ9Y6N5 450 aa15.63■□□□□ 0.09
TPM3-208ENST00000341485 A0A1W2PPM1 405 aa15.63■□□□□ 0.09
TPM3-208ENST00000341485 PNPLA4P41247 253 aa15.63■□□□□ 0.09
TPM3-208ENST00000341485 SLC18A1P54219 525 aa15.63■□□□□ 0.09
TPM3-208ENST00000341485 GEMIN4P57678 1058 aaKnown RBP15.63■□□□□ 0.09
TPM3-208ENST00000341485 ROR1Q01973 937 aa15.63■□□□□ 0.09
TPM3-208ENST00000341485 MTFR1Q15390 333 aa15.63■□□□□ 0.09
TPM3-208ENST00000341485 CDO1Q16878 200 aa15.63■□□□□ 0.09
TPM3-208ENST00000341485 GALNTL6Q49A17 601 aa15.63■□□□□ 0.09
TPM3-208ENST00000341485 CCDC14Q49A88 953 aa15.63■□□□□ 0.09
TPM3-208ENST00000341485 PPP1R26Q5T8A7 1209 aaPredicted RBP15.63■□□□□ 0.09
TPM3-208ENST00000341485 CYB5D1Q6P9G0 228 aa15.63■□□□□ 0.09
TPM3-208ENST00000341485 RNF169Q8NCN4 708 aa15.63■□□□□ 0.09
TPM3-208ENST00000341485 FBXO36Q8NEA4 188 aa15.63■□□□□ 0.09
TPM3-208ENST00000341485 ZFP42Q96MM3 310 aa15.63■□□□□ 0.09
TPM3-208ENST00000341485 MAK16Q9BXY0 300 aaKnown RBP15.63■□□□□ 0.09
TPM3-208ENST00000341485 ADAM33Q9BZ11 813 aa15.63■□□□□ 0.09
TPM3-208ENST00000341485 RNF208Q9H0X6 261 aa15.63■□□□□ 0.09
TPM3-208ENST00000341485 GOLGA2P5Q9HBQ8 144 aa15.63■□□□□ 0.09
TPM3-208ENST00000341485 SENP1Q9P0U3 644 aa15.63■□□□□ 0.09
TPM3-208ENST00000341485 XPO7Q9UIA9 1087 aaKnown RBP15.63■□□□□ 0.09
TPM3-208ENST00000341485 GIT1Q9Y2X7 761 aa15.63■□□□□ 0.09
TPM3-208ENST00000341485 NME7Q9Y5B8 376 aa15.63■□□□□ 0.09
TPM3-208ENST00000341485 MEIS3P2A8K0S8 358 aa15.62■□□□□ 0.09
TPM3-208ENST00000341485 PIRO00625 290 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms