RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 SLC6A3Q01959 620 aa15.13■□□□□ 0.01
TDP2-201ENST00000341060 CTC1Q2NKJ3 1217 aa15.13■□□□□ 0.01
TDP2-201ENST00000341060 SCYL2Q6P3W7 929 aa15.13■□□□□ 0.01
TDP2-201ENST00000341060 ZNF449Q6P9G9 518 aa15.13■□□□□ 0.01
TDP2-201ENST00000341060 TMEM110Q86TL2 294 aa15.13■□□□□ 0.01
TDP2-201ENST00000341060 SLC26A11Q86WA9 606 aa15.13■□□□□ 0.01
TDP2-201ENST00000341060 TTC30AQ86WT1 665 aa15.13■□□□□ 0.01
TDP2-201ENST00000341060 PCDH19Q8TAB3 1148 aa15.13■□□□□ 0.01
TDP2-201ENST00000341060 NLRP7Q8WX94 980 aa15.13■□□□□ 0.01
TDP2-201ENST00000341060 N4BP2L2Q92802 583 aaPredicted RBP15.13■□□□□ 0.01
TDP2-201ENST00000341060 KIF12Q96FN5 646 aa15.13■□□□□ 0.01
TDP2-201ENST00000341060 FAM111AQ96PZ2 611 aa15.13■□□□□ 0.01
TDP2-201ENST00000341060 SNRNP25Q9BV90 132 aaKnown RBP15.13■□□□□ 0.01
TDP2-201ENST00000341060 SLC4A5Q9BY07 1137 aa15.13■□□□□ 0.01
TDP2-201ENST00000341060 TRIM55Q9BYV6 548 aa15.13■□□□□ 0.01
TDP2-201ENST00000341060 KLC2Q9H0B6 622 aa15.13■□□□□ 0.01
TDP2-201ENST00000341060 RRAGCQ9HB90 399 aa15.13■□□□□ 0.01
TDP2-201ENST00000341060 POPDC2Q9HBU9 364 aa15.13■□□□□ 0.01
TDP2-201ENST00000341060 CNTN3Q9P232 1028 aa15.13■□□□□ 0.01
TDP2-201ENST00000341060 KANSL3Q9P2N6 904 aa15.13■□□□□ 0.01
TDP2-201ENST00000341060 LNPEPQ9UIQ6 1025 aa15.13■□□□□ 0.01
TDP2-201ENST00000341060 TTLL3Q9Y4R7 772 aa15.13■□□□□ 0.01
TDP2-201ENST00000341060 ZNF487B1APH4 448 aa15.13■□□□□ 0.01
TDP2-201ENST00000341060 HNRNPCL1O60812 293 aaKnown RBP15.13■□□□□ 0.01
TDP2-201ENST00000341060 TGDSO95455 350 aa15.13■□□□□ 0.01
TDP2-201ENST00000341060 IL1BP01584 269 aa15.13■□□□□ 0.01
TDP2-201ENST00000341060 SETSIPP0DME0 302 aa15.13■□□□□ 0.01
TDP2-201ENST00000341060 DESP17661 470 aa15.13■□□□□ 0.01
TDP2-201ENST00000341060 GRM5P41594 1212 aa15.13■□□□□ 0.01
TDP2-201ENST00000341060 OVGP1Q12889 678 aa15.13■□□□□ 0.01
TDP2-201ENST00000341060 TTC39BQ5VTQ0 682 aaPredicted RBP15.13■□□□□ 0.01
TDP2-201ENST00000341060 TAPT1Q6NXT6 567 aa15.13■□□□□ 0.01
TDP2-201ENST00000341060 MTHFD1LQ6UB35 978 aa15.13■□□□□ 0.01
TDP2-201ENST00000341060 MTDHQ86UE4 582 aaKnown RBP15.13■□□□□ 0.01
TDP2-201ENST00000341060 SHCBP1Q8NEM2 672 aa15.13■□□□□ 0.01
TDP2-201ENST00000341060 RFWD2Q8NHY2 731 aa15.13■□□□□ 0.01
TDP2-201ENST00000341060 KHSRPQ92945 711 aaKnown RBP eCLIP15.13■□□□□ 0.01
TDP2-201ENST00000341060 TBC1D10AQ9BXI6 508 aa15.13■□□□□ 0.01
TDP2-201ENST00000341060 CXorf56Q9H5V9 222 aa15.13■□□□□ 0.01
TDP2-201ENST00000341060 ETNK2Q9NVF9 386 aa15.13■□□□□ 0.01
TDP2-201ENST00000341060 GPATCH2LQ9NWQ4 482 aa15.13■□□□□ 0.01
TDP2-201ENST00000341060 DCTN4Q9UJW0 460 aa15.13■□□□□ 0.01
TDP2-201ENST00000341060 ZNF180Q9UJW8 692 aa15.13■□□□□ 0.01
TDP2-201ENST00000341060 NUMBLQ9Y6R0 609 aa15.13■□□□□ 0.01
TDP2-201ENST00000341060 SCN4AP35499 1836 aa15.12■□□□□ 0.01
TDP2-201ENST00000341060 ZNF286BP0CG31 522 aa15.12■□□□□ 0.01
TDP2-201ENST00000341060 PYGBP11216 843 aa15.12■□□□□ 0.01
TDP2-201ENST00000341060 GCLCP48506 637 aaPredicted RBP15.12■□□□□ 0.01
TDP2-201ENST00000341060 PRKD1Q15139 912 aaPredicted RBP15.12■□□□□ 0.01
TDP2-201ENST00000341060 MAMDC4Q6UXC1 1216 aa15.12■□□□□ 0.01
TDP2-201ENST00000341060 FASTKD5Q7L8L6 764 aaKnown RBP15.12■□□□□ 0.01
TDP2-201ENST00000341060 PRPF39Q86UA1 669 aaKnown RBP15.12■□□□□ 0.01
TDP2-201ENST00000341060 CAND1Q86VP6 1230 aaKnown RBP15.12■□□□□ 0.01
TDP2-201ENST00000341060 SESTD1Q86VW0 696 aa15.12■□□□□ 0.01
TDP2-201ENST00000341060 LRRC6Q86X45 466 aa15.12■□□□□ 0.01
TDP2-201ENST00000341060 SLC35F5Q8WV83 523 aa15.12■□□□□ 0.01
TDP2-201ENST00000341060 EMID1Q96A84 441 aaPredicted RBP15.12■□□□□ 0.01
TDP2-201ENST00000341060 LRRC39Q96DD0 335 aa15.12■□□□□ 0.01
TDP2-201ENST00000341060 CFAP36Q96G28 342 aa15.12■□□□□ 0.01
TDP2-201ENST00000341060 RSRC1Q96IZ7 334 aaKnown RBP15.12■□□□□ 0.01
TDP2-201ENST00000341060 ZC3H7BQ9UGR2 993 aaKnown RBP15.12■□□□□ 0.01
TDP2-201ENST00000341060 TRDMT1O14717 391 aaKnown RBP15.11■□□□□ 0.01
TDP2-201ENST00000341060 PAPSS1O43252 624 aaPredicted RBP15.11■□□□□ 0.01
TDP2-201ENST00000341060 PRKCHP24723 683 aa15.11■□□□□ 0.01
TDP2-201ENST00000341060 PTPN4P29074 926 aa15.11■□□□□ 0.01
TDP2-201ENST00000341060 HDAC4P56524 1084 aa15.11■□□□□ 0.01
TDP2-201ENST00000341060 CA9Q16790 459 aa15.11■□□□□ 0.01
TDP2-201ENST00000341060 C4orf22Q6V702 233 aa15.11■□□□□ 0.01
TDP2-201ENST00000341060 ZDHHC17Q8IUH5 632 aa15.11■□□□□ 0.01
TDP2-201ENST00000341060 SCUBE3Q8IX30 993 aa15.11■□□□□ 0.01
TDP2-201ENST00000341060 GPATCH11Q8N954 259 aa15.11■□□□□ 0.01
TDP2-201ENST00000341060 FAM13CQ8NE31 585 aa15.11■□□□□ 0.01
TDP2-201ENST00000341060 MRPL45Q9BRJ2 306 aaKnown RBP15.11■□□□□ 0.01
TDP2-201ENST00000341060 C16orf70Q9BSU1 422 aa15.11■□□□□ 0.01
TDP2-201ENST00000341060 TLE6Q9H808 572 aa15.11■□□□□ 0.01
TDP2-201ENST00000341060 ZNF408Q9H9D4 720 aa15.11■□□□□ 0.01
TDP2-201ENST00000341060 ALG13Q9NP73 1137 aaKnown RBP15.11■□□□□ 0.01
TDP2-201ENST00000341060 A0A0G2JND7 137 aa15.11■□□□□ 0.01
TDP2-201ENST00000341060 KLF11O14901 512 aa15.11■□□□□ 0.01
TDP2-201ENST00000341060 KRT37O76014 449 aa15.11■□□□□ 0.01
TDP2-201ENST00000341060 APRTP07741 180 aa15.11■□□□□ 0.01
TDP2-201ENST00000341060 EPHB2P29323 1055 aa15.11■□□□□ 0.01
TDP2-201ENST00000341060 CCNG1P51959 295 aa15.11■□□□□ 0.01
TDP2-201ENST00000341060 SNX16P57768 344 aa15.11■□□□□ 0.01
TDP2-201ENST00000341060 FAXCQ5TGI0 409 aa15.11■□□□□ 0.01
TDP2-201ENST00000341060 ACOT1Q86TX2 421 aa15.11■□□□□ 0.01
TDP2-201ENST00000341060 PLCD3Q8N3E9 789 aa15.11■□□□□ 0.01
TDP2-201ENST00000341060 MCUQ8NE86 351 aa15.11■□□□□ 0.01
TDP2-201ENST00000341060 STK32AQ8WU08 396 aa15.11■□□□□ 0.01
TDP2-201ENST00000341060 APBB2Q92870 758 aa15.11■□□□□ 0.01
TDP2-201ENST00000341060 TTC17Q96AE7 1141 aa15.11■□□□□ 0.01
TDP2-201ENST00000341060 OPTNQ96CV9 577 aa15.11■□□□□ 0.01
TDP2-201ENST00000341060 SRPK1Q96SB4 655 aaKnown RBP15.11■□□□□ 0.01
TDP2-201ENST00000341060 NRDE2Q9H7Z3 1164 aa15.11■□□□□ 0.01
TDP2-201ENST00000341060 PLAC1Q9HBJ0 212 aa15.11■□□□□ 0.01
TDP2-201ENST00000341060 VTA1Q9NP79 307 aa15.11■□□□□ 0.01
TDP2-201ENST00000341060 FAM49BQ9NUQ9 324 aa15.11■□□□□ 0.01
TDP2-201ENST00000341060 DERAQ9Y315 318 aa15.11■□□□□ 0.01
TDP2-201ENST00000341060 SNX9Q9Y5X1 595 aa15.11■□□□□ 0.01
TDP2-201ENST00000341060 SLC15A5A6NIM6 579 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms