RNA–Protein interactions for RNA: ENST00000340748.8

DNMT1-201, Transcript of DNA methyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-201ENST00000340748 ADH1AP07327 375 aa13.28□□□□□ -0.28
DNMT1-201ENST00000340748 DUSP28Q4G0W2 176 aa13.28□□□□□ -0.28
DNMT1-201ENST00000340748 EARS2Q5JPH6 523 aaKnown RBP13.28□□□□□ -0.28
DNMT1-201ENST00000340748 LRRC8DQ7L1W4 858 aa13.28□□□□□ -0.28
DNMT1-201ENST00000340748 MAML3Q96JK9 1138 aa13.28□□□□□ -0.28
DNMT1-201ENST00000340748 PURBQ96QR8 312 aaKnown RBP13.28□□□□□ -0.28
DNMT1-201ENST00000340748 KLF6Q99612 283 aaPredicted RBP13.28□□□□□ -0.28
DNMT1-201ENST00000340748 AURKCQ9UQB9 309 aa13.28□□□□□ -0.28
DNMT1-201ENST00000340748 AAR2Q9Y312 384 aaKnown RBP13.28□□□□□ -0.28
DNMT1-201ENST00000340748 SUPT3HB4E1H0 165 aa13.28□□□□□ -0.28
DNMT1-201ENST00000340748 H0Y626 953 aa13.28□□□□□ -0.28
DNMT1-201ENST00000340748 MLLT1Q03111 559 aaPredicted RBP13.28□□□□□ -0.28
DNMT1-201ENST00000340748 CNGA3Q16281 694 aa13.28□□□□□ -0.28
DNMT1-201ENST00000340748 PREPLQ4J6C6 727 aaPredicted RBP13.28□□□□□ -0.28
DNMT1-201ENST00000340748 CHSY1Q86X52 802 aa13.28□□□□□ -0.28
DNMT1-201ENST00000340748 CEP70Q8NHQ1 597 aa13.28□□□□□ -0.28
DNMT1-201ENST00000340748 PPP1R36Q96LQ0 422 aa13.28□□□□□ -0.28
DNMT1-201ENST00000340748 CNPY3Q9BT09 278 aa13.28□□□□□ -0.28
DNMT1-201ENST00000340748 FRMPD4Q14CM0 1322 aa13.28□□□□□ -0.28
DNMT1-201ENST00000340748 ADCY6O43306 1168 aa13.28□□□□□ -0.28
DNMT1-201ENST00000340748 CNTFP26441 200 aa13.28□□□□□ -0.28
DNMT1-201ENST00000340748 EPHB2P29323 1055 aa13.28□□□□□ -0.28
DNMT1-201ENST00000340748 SLC27A1Q6PCB7 646 aa13.28□□□□□ -0.28
DNMT1-201ENST00000340748 SLC47A2Q86VL8 602 aa13.28□□□□□ -0.28
DNMT1-201ENST00000340748 FBXO36Q8NEA4 188 aa13.28□□□□□ -0.28
DNMT1-201ENST00000340748 LZICQ8WZA0 190 aa13.28□□□□□ -0.28
DNMT1-201ENST00000340748 APBB2Q92870 758 aa13.28□□□□□ -0.28
DNMT1-201ENST00000340748 TMA16Q96EY4 203 aaKnown RBP13.28□□□□□ -0.28
DNMT1-201ENST00000340748 TMEM176AQ96HP8 235 aa13.28□□□□□ -0.28
DNMT1-201ENST00000340748 NAT9Q9BTE0 207 aa13.28□□□□□ -0.28
DNMT1-201ENST00000340748 RIC8BQ9NVN3 520 aa13.28□□□□□ -0.28
DNMT1-201ENST00000340748 B2RBV5 119 aa13.27□□□□□ -0.28
DNMT1-201ENST00000340748 PRPF4O43172 522 aaKnown RBP eCLIP13.27□□□□□ -0.28
DNMT1-201ENST00000340748 ENO3P13929 434 aaPredicted RBP13.27□□□□□ -0.28
DNMT1-201ENST00000340748 RRM1P23921 792 aa13.27□□□□□ -0.28
DNMT1-201ENST00000340748 TLE2Q04725 743 aa13.27□□□□□ -0.28
DNMT1-201ENST00000340748 MROH9Q5TGP6 573 aa13.27□□□□□ -0.28
DNMT1-201ENST00000340748 LRRC6Q86X45 466 aa13.27□□□□□ -0.28
DNMT1-201ENST00000340748 ABRAQ8N0Z2 381 aa13.27□□□□□ -0.28
DNMT1-201ENST00000340748 YIPF3Q9GZM5 350 aa13.27□□□□□ -0.28
DNMT1-201ENST00000340748 COG4Q9H9E3 785 aa13.27□□□□□ -0.28
DNMT1-201ENST00000340748 BATF3Q9NR55 127 aa13.27□□□□□ -0.28
DNMT1-201ENST00000340748 GID8Q9NWU2 228 aa13.27□□□□□ -0.28
DNMT1-201ENST00000340748 CD274Q9NZQ7 290 aa13.27□□□□□ -0.28
DNMT1-201ENST00000340748 ITGA11Q9UKX5 1188 aa13.27□□□□□ -0.28
DNMT1-201ENST00000340748 AP1G2O75843 785 aa13.27□□□□□ -0.28
DNMT1-201ENST00000340748 CYP3A4P08684 503 aa13.27□□□□□ -0.28
DNMT1-201ENST00000340748 TIGD7Q6NT04 549 aaPredicted RBP13.27□□□□□ -0.28
DNMT1-201ENST00000340748 PRPF39Q86UA1 669 aaKnown RBP13.27□□□□□ -0.28
DNMT1-201ENST00000340748 HELQQ8TDG4 1101 aa13.27□□□□□ -0.28
DNMT1-201ENST00000340748 SLC20A1Q8WUM9 679 aa13.27□□□□□ -0.28
DNMT1-201ENST00000340748 ATG4AQ8WYN0 398 aa13.27□□□□□ -0.28
DNMT1-201ENST00000340748 MKL1Q969V6 931 aa13.27□□□□□ -0.28
DNMT1-201ENST00000340748 CISHQ9NSE2 258 aa13.27□□□□□ -0.28
DNMT1-201ENST00000340748 MRPS23Q9Y3D9 190 aaKnown RBP13.27□□□□□ -0.28
DNMT1-201ENST00000340748 FAM237AA0A1B0GTK4 181 aa13.27□□□□□ -0.29
DNMT1-201ENST00000340748 SDR42E2A6NKP2 422 aa13.27□□□□□ -0.29
DNMT1-201ENST00000340748 PEX10O60683 326 aa13.27□□□□□ -0.29
DNMT1-201ENST00000340748 SLC11A2P49281 568 aa13.27□□□□□ -0.29
DNMT1-201ENST00000340748 PTENP60484 403 aa13.27□□□□□ -0.29
DNMT1-201ENST00000340748 OTUD4Q01804 1114 aaKnown RBP13.27□□□□□ -0.29
DNMT1-201ENST00000340748 FAM83EQ2M2I3 478 aa13.27□□□□□ -0.29
DNMT1-201ENST00000340748 OTOP1Q7RTM1 612 aa13.27□□□□□ -0.29
DNMT1-201ENST00000340748 LRRC34Q8IZ02 419 aa13.27□□□□□ -0.29
DNMT1-201ENST00000340748 EPS8L3Q8TE67 593 aaKnown RBP13.27□□□□□ -0.29
DNMT1-201ENST00000340748 CCDC90BQ9GZT6 254 aa13.27□□□□□ -0.29
DNMT1-201ENST00000340748 UNC93B1Q9H1C4 597 aa13.27□□□□□ -0.29
DNMT1-201ENST00000340748 DDIT4Q9NX09 232 aa13.27□□□□□ -0.29
DNMT1-201ENST00000340748 PIK3C2AO00443 1686 aa13.27□□□□□ -0.29
DNMT1-201ENST00000340748 SLITRK3O94933 977 aa13.27□□□□□ -0.29
DNMT1-201ENST00000340748 RALBP11234 206 aa13.27□□□□□ -0.29
DNMT1-201ENST00000340748 MED21Q13503 144 aa13.27□□□□□ -0.29
DNMT1-201ENST00000340748 KRT72Q14CN4 511 aa13.27□□□□□ -0.29
DNMT1-201ENST00000340748 CAPRIN2Q6IMN6 1127 aaKnown RBP13.27□□□□□ -0.29
DNMT1-201ENST00000340748 ANKS3Q6ZW76 656 aa13.27□□□□□ -0.29
DNMT1-201ENST00000340748 SV2AQ7L0J3 742 aa13.27□□□□□ -0.29
DNMT1-201ENST00000340748 SLFN11Q7Z7L1 901 aa13.27□□□□□ -0.29
DNMT1-201ENST00000340748 ACOT1Q86TX2 421 aa13.27□□□□□ -0.29
DNMT1-201ENST00000340748 ARMC2Q8NEN0 867 aa13.27□□□□□ -0.29
DNMT1-201ENST00000340748 MDM1Q8TC05 714 aa13.27□□□□□ -0.29
DNMT1-201ENST00000340748 POP1Q99575 1024 aaKnown RBP13.27□□□□□ -0.29
DNMT1-201ENST00000340748 RUBCNLQ9H714 662 aa13.27□□□□□ -0.29
DNMT1-201ENST00000340748 OSGEPQ9NPF4 335 aa13.27□□□□□ -0.29
DNMT1-201ENST00000340748 PKD2L2Q9NZM6 624 aa13.27□□□□□ -0.29
DNMT1-201ENST00000340748 SLC24A2Q9UI40 661 aa13.27□□□□□ -0.29
DNMT1-201ENST00000340748 SLC39A10Q9ULF5 831 aa13.27□□□□□ -0.29
DNMT1-201ENST00000340748 CCDC78A2IDD5 438 aa13.26□□□□□ -0.29
DNMT1-201ENST00000340748 SERPINB8P50452 374 aa13.26□□□□□ -0.29
DNMT1-201ENST00000340748 ARHGEF7Q14155 803 aa13.26□□□□□ -0.29
DNMT1-201ENST00000340748 NFE2Q16621 373 aaPredicted RBP13.26□□□□□ -0.29
DNMT1-201ENST00000340748 NOL9Q5SY16 702 aaKnown RBP13.26□□□□□ -0.29
DNMT1-201ENST00000340748 FBXW10Q5XX13 1052 aa13.26□□□□□ -0.29
DNMT1-201ENST00000340748 OVOS1Q6IE37 1185 aa13.26□□□□□ -0.29
DNMT1-201ENST00000340748 SH3RF1Q7Z6J0 888 aa13.26□□□□□ -0.29
DNMT1-201ENST00000340748 ADGRF2Q8IZF7 708 aa13.26□□□□□ -0.29
DNMT1-201ENST00000340748 FAM172AQ8WUF8 416 aa13.26□□□□□ -0.29
DNMT1-201ENST00000340748 VCPIP1Q96JH7 1222 aa13.26□□□□□ -0.29
DNMT1-201ENST00000340748 DUSP9Q99956 384 aaKnown RBP13.26□□□□□ -0.29
DNMT1-201ENST00000340748 THTPAQ9BU02 230 aa13.26□□□□□ -0.29
DNMT1-201ENST00000340748 PJA2O43164 708 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms