RNA–Protein interactions for RNA: ENST00000340480.8

HIPK1-201, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene HIPK1, Length 6,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-201ENST00000340480 RPL10AP62906 217 aaKnown RBP7.88□□□□□ -1.15
HIPK1-201ENST00000340480 GTF2H3Q13889 308 aa7.88□□□□□ -1.15
HIPK1-201ENST00000340480 TIGD7Q6NT04 549 aaPredicted RBP7.88□□□□□ -1.15
HIPK1-201ENST00000340480 KIAA0319LQ8IZA0 1049 aa7.88□□□□□ -1.15
HIPK1-201ENST00000340480 SLC7A14Q8TBB6 771 aa7.88□□□□□ -1.15
HIPK1-201ENST00000340480 SNX19Q92543 992 aa7.88□□□□□ -1.15
HIPK1-201ENST00000340480 MAML3Q96JK9 1138 aa7.88□□□□□ -1.15
HIPK1-201ENST00000340480 CDK5RAP1Q96SZ6 601 aaKnown RBP7.88□□□□□ -1.15
HIPK1-201ENST00000340480 PDGFDQ9GZP0 370 aaPredicted RBP7.88□□□□□ -1.15
HIPK1-201ENST00000340480 AAASQ9NRG9 546 aa7.88□□□□□ -1.15
HIPK1-201ENST00000340480 IGKV6D-21A0A0A0MT36 114 aa7.88□□□□□ -1.15
HIPK1-201ENST00000340480 B3GAT3O94766 335 aa7.88□□□□□ -1.15
HIPK1-201ENST00000340480 LMNAP02545 664 aaKnown RBP7.88□□□□□ -1.15
HIPK1-201ENST00000340480 MIPP30301 263 aa7.88□□□□□ -1.15
HIPK1-201ENST00000340480 SSTR3P32745 418 aaPredicted RBP7.88□□□□□ -1.15
HIPK1-201ENST00000340480 SH3BGRP55822 239 aaPredicted RBP7.88□□□□□ -1.15
HIPK1-201ENST00000340480 ITIH4Q14624 930 aa7.88□□□□□ -1.15
HIPK1-201ENST00000340480 LONRF1Q17RB8 773 aa7.88□□□□□ -1.15
HIPK1-201ENST00000340480 SMTNL2Q2TAL5 461 aa7.88□□□□□ -1.15
HIPK1-201ENST00000340480 FAM71DQ8N9W8 422 aa7.88□□□□□ -1.15
HIPK1-201ENST00000340480 OR2W6PQ8NHA6 318 aa7.88□□□□□ -1.15
HIPK1-201ENST00000340480 NKD2Q969F2 451 aaPredicted RBP7.88□□□□□ -1.15
HIPK1-201ENST00000340480 MRPL9Q9BYD2 267 aaKnown RBP7.88□□□□□ -1.15
HIPK1-201ENST00000340480 XPNPEP3Q9NQH7 507 aa7.88□□□□□ -1.15
HIPK1-201ENST00000340480 STXBP5LQ9Y2K9 1186 aa7.88□□□□□ -1.15
HIPK1-201ENST00000340480 APOA4P06727 396 aa7.88□□□□□ -1.15
HIPK1-201ENST00000340480 PDCD2Q16342 344 aaPredicted RBP7.88□□□□□ -1.15
HIPK1-201ENST00000340480 CYP1B1Q16678 543 aa7.88□□□□□ -1.15
HIPK1-201ENST00000340480 FSCBQ5H9T9 825 aa7.88□□□□□ -1.15
HIPK1-201ENST00000340480 GLRA4Q5JXX5 417 aa7.88□□□□□ -1.15
HIPK1-201ENST00000340480 TTC39BQ5VTQ0 682 aaPredicted RBP7.88□□□□□ -1.15
HIPK1-201ENST00000340480 RSPH1Q8WYR4 309 aa7.88□□□□□ -1.15
HIPK1-201ENST00000340480 LRRC37BQ96QE4 947 aa7.88□□□□□ -1.15
HIPK1-201ENST00000340480 SP110Q9HB58 689 aa7.88□□□□□ -1.15
HIPK1-201ENST00000340480 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.88□□□□□ -1.15
HIPK1-201ENST00000340480 M0QYT0 321 aa7.88□□□□□ -1.15
HIPK1-201ENST00000340480 UNGP13051 313 aaPredicted RBP7.88□□□□□ -1.15
HIPK1-201ENST00000340480 GRIK1P39086 918 aa7.88□□□□□ -1.15
HIPK1-201ENST00000340480 TNFSF9P41273 254 aa7.88□□□□□ -1.15
HIPK1-201ENST00000340480 RAP1GAPP47736 663 aa7.88□□□□□ -1.15
HIPK1-201ENST00000340480 C3orf62Q6ZUJ4 267 aa7.88□□□□□ -1.15
HIPK1-201ENST00000340480 MYCBPAPQ8TBZ2 947 aa7.88□□□□□ -1.15
HIPK1-201ENST00000340480 SEPT8Q92599 483 aa7.88□□□□□ -1.15
HIPK1-201ENST00000340480 PDZD7Q9H5P4 517 aa7.88□□□□□ -1.15
HIPK1-201ENST00000340480 DDIT4Q9NX09 232 aa7.88□□□□□ -1.15
HIPK1-201ENST00000340480 TRHDEQ9UKU6 1024 aa7.88□□□□□ -1.15
HIPK1-201ENST00000340480 G3BP2Q9UN86 482 aaKnown RBP7.88□□□□□ -1.15
HIPK1-201ENST00000340480 LIASO43766 372 aa7.88□□□□□ -1.15
HIPK1-201ENST00000340480 DUSP11O75319 330 aaKnown RBP7.88□□□□□ -1.15
HIPK1-201ENST00000340480 NOS2P35228 1153 aa7.88□□□□□ -1.15
HIPK1-201ENST00000340480 DNAJC3Q13217 504 aa7.88□□□□□ -1.15
HIPK1-201ENST00000340480 PTK7Q13308 1070 aa7.88□□□□□ -1.15
HIPK1-201ENST00000340480 ZNF280DQ6N043 979 aa7.88□□□□□ -1.15
HIPK1-201ENST00000340480 IFNLR1Q8IU57 520 aaPredicted RBP7.88□□□□□ -1.15
HIPK1-201ENST00000340480 ATP6V0D2Q8N8Y2 350 aa7.88□□□□□ -1.15
HIPK1-201ENST00000340480 PPHLN1Q8NEY8 458 aaKnown RBP7.88□□□□□ -1.15
HIPK1-201ENST00000340480 TTC17Q96AE7 1141 aa7.88□□□□□ -1.15
HIPK1-201ENST00000340480 ASIC4Q96FT7 647 aa7.88□□□□□ -1.15
HIPK1-201ENST00000340480 TSSK1BQ9BXA7 367 aa7.88□□□□□ -1.15
HIPK1-201ENST00000340480 DMAP1Q9NPF5 467 aaPredicted RBP7.88□□□□□ -1.15
HIPK1-201ENST00000340480 ABCF3Q9NUQ8 709 aa7.88□□□□□ -1.15
HIPK1-201ENST00000340480 CDH9Q9ULB4 789 aa7.88□□□□□ -1.15
HIPK1-201ENST00000340480 hCG_1818297A0A087WSY0 165 aa7.87□□□□□ -1.15
HIPK1-201ENST00000340480 HADHAP40939 763 aa7.87□□□□□ -1.15
HIPK1-201ENST00000340480 DENND1BQ6P3S1 775 aa7.87□□□□□ -1.15
HIPK1-201ENST00000340480 SLC26A11Q86WA9 606 aa7.87□□□□□ -1.15
HIPK1-201ENST00000340480 LRRC49Q8IUZ0 686 aa7.87□□□□□ -1.15
HIPK1-201ENST00000340480 EMID1Q96A84 441 aaPredicted RBP7.87□□□□□ -1.15
HIPK1-201ENST00000340480 SMYD3Q9H7B4 428 aa7.87□□□□□ -1.15
HIPK1-201ENST00000340480 MAGEB16A2A368 324 aa7.87□□□□□ -1.15
HIPK1-201ENST00000340480 ZNF197O14709 1029 aa7.87□□□□□ -1.15
HIPK1-201ENST00000340480 TM9SF1O15321 606 aa7.87□□□□□ -1.15
HIPK1-201ENST00000340480 GRAP2O75791 330 aa7.87□□□□□ -1.15
HIPK1-201ENST00000340480 HAUS5O94927 633 aa7.87□□□□□ -1.15
HIPK1-201ENST00000340480 NCAM1P13591 858 aa7.87□□□□□ -1.15
HIPK1-201ENST00000340480 ARFIP2P53365 341 aa7.87□□□□□ -1.15
HIPK1-201ENST00000340480 PHEXP78562 749 aa7.87□□□□□ -1.15
HIPK1-201ENST00000340480 ARHGAP1Q07960 439 aa7.87□□□□□ -1.15
HIPK1-201ENST00000340480 NOGQ13253 232 aa7.87□□□□□ -1.15
HIPK1-201ENST00000340480 XRCC4Q13426 336 aa7.87□□□□□ -1.15
HIPK1-201ENST00000340480 TTC30BQ8N4P2 665 aa7.87□□□□□ -1.15
HIPK1-201ENST00000340480 NIPA2Q8N8Q9 360 aa7.87□□□□□ -1.15
HIPK1-201ENST00000340480 PDZD8Q8NEN9 1154 aa7.87□□□□□ -1.15
HIPK1-201ENST00000340480 ATXN2LQ8WWM7 1075 aaKnown RBP7.87□□□□□ -1.15
HIPK1-201ENST00000340480 TSPAN17Q96FV3 270 aa7.87□□□□□ -1.15
HIPK1-201ENST00000340480 FBXO44Q9H4M3 255 aa7.87□□□□□ -1.15
HIPK1-201ENST00000340480 TJP2Q9UDY2 1190 aa7.87□□□□□ -1.15
HIPK1-201ENST00000340480 AAR2Q9Y312 384 aaKnown RBP7.87□□□□□ -1.15
HIPK1-201ENST00000340480 CHADO15335 359 aa7.87□□□□□ -1.15
HIPK1-201ENST00000340480 TYK2P29597 1187 aa7.87□□□□□ -1.15
HIPK1-201ENST00000340480 GEMP55040 296 aa7.87□□□□□ -1.15
HIPK1-201ENST00000340480 FRA10AC1Q70Z53 315 aa7.87□□□□□ -1.15
HIPK1-201ENST00000340480 NUDCD3Q8IVD9 361 aa7.87□□□□□ -1.15
HIPK1-201ENST00000340480 ALLCQ8N6M5 410 aa7.87□□□□□ -1.15
HIPK1-201ENST00000340480 EMC1Q8N766 993 aa7.87□□□□□ -1.15
HIPK1-201ENST00000340480 IFT43Q96FT9 208 aa7.87□□□□□ -1.15
HIPK1-201ENST00000340480 SEMA4AQ9H3S1 761 aa7.87□□□□□ -1.15
HIPK1-201ENST00000340480 STN1Q9H668 368 aaKnown RBP7.87□□□□□ -1.15
HIPK1-201ENST00000340480 POPDC2Q9HBU9 364 aa7.87□□□□□ -1.15
HIPK1-201ENST00000340480 KRT82Q9NSB4 513 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms