RNA–Protein interactions for RNA: ENST00000339276.5

SFN-201, Transcript of stratifin, humanhuman

APPRIS P1 BASIC

Gene SFN, Length 1,320 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFN-201ENST00000339276 PLEKP08567 350 aaPredicted RBP17.53■□□□□ 0.4
SFN-201ENST00000339276 MBL2P11226 248 aaPredicted RBP17.53■□□□□ 0.4
SFN-201ENST00000339276 RALAP11233 206 aa17.53■□□□□ 0.4
SFN-201ENST00000339276 TNFAIP3P21580 790 aa17.53■□□□□ 0.4
SFN-201ENST00000339276 HNRNPH3P31942 346 aaKnown RBP17.53■□□□□ 0.4
SFN-201ENST00000339276 SLC7A9P82251 487 aa17.53■□□□□ 0.4
SFN-201ENST00000339276 ZXDBP98169 803 aa17.53■□□□□ 0.4
SFN-201ENST00000339276 CENPCQ03188 943 aa17.53■□□□□ 0.4
SFN-201ENST00000339276 GRM2Q14416 872 aa17.53■□□□□ 0.4
SFN-201ENST00000339276 ZNF268Q14587 947 aaPredicted RBP17.53■□□□□ 0.4
SFN-201ENST00000339276 ARID5BQ14865 1188 aa17.53■□□□□ 0.4
SFN-201ENST00000339276 C10orf120Q5SQS8 335 aa17.53■□□□□ 0.4
SFN-201ENST00000339276 BTBD8Q5XKL5 378 aa17.53■□□□□ 0.4
SFN-201ENST00000339276 OR6B2Q6IFH4 312 aa17.53■□□□□ 0.4
SFN-201ENST00000339276 VITQ6UXI7 678 aa17.53■□□□□ 0.4
SFN-201ENST00000339276 MMS22LQ6ZRQ5 1243 aa17.53■□□□□ 0.4
SFN-201ENST00000339276 CELF5Q8N6W0 485 aaKnown RBP17.53■□□□□ 0.4
SFN-201ENST00000339276 OR8K1Q8NGG5 319 aa17.53■□□□□ 0.4
SFN-201ENST00000339276 SMOC2Q9H3U7 446 aa17.53■□□□□ 0.4
SFN-201ENST00000339276 ABHD10Q9NUJ1 306 aa17.53■□□□□ 0.4
SFN-201ENST00000339276 MUTYHQ9UIF7 546 aa17.53■□□□□ 0.4
SFN-201ENST00000339276 ARHGAP26Q9UNA1 814 aa17.53■□□□□ 0.4
SFN-201ENST00000339276 CPQQ9Y646 472 aa17.53■□□□□ 0.4
SFN-201ENST00000339276 AKR1B15C9JRZ8 316 aaPredicted RBP17.52■□□□□ 0.4
SFN-201ENST00000339276 DDX3XO00571 662 aaKnown RBP eCLIP17.52■□□□□ 0.4
SFN-201ENST00000339276 DPYSL4O14531 572 aa17.52■□□□□ 0.4
SFN-201ENST00000339276 SART1O43290 800 aaKnown RBP17.52■□□□□ 0.4
SFN-201ENST00000339276 MMP8P22894 467 aa17.52■□□□□ 0.4
SFN-201ENST00000339276 NSFP46459 744 aaKnown RBP17.52■□□□□ 0.4
SFN-201ENST00000339276 GABRB2P47870 512 aa17.52■□□□□ 0.4
SFN-201ENST00000339276 SNX16P57768 344 aa17.52■□□□□ 0.4
SFN-201ENST00000339276 TAF5Q15542 800 aa17.52■□□□□ 0.4
SFN-201ENST00000339276 WDR59Q6PJI9 974 aa17.52■□□□□ 0.4
SFN-201ENST00000339276 OLFML1Q6UWY5 402 aa17.52■□□□□ 0.4
SFN-201ENST00000339276 XYLT1Q86Y38 959 aa17.52■□□□□ 0.4
SFN-201ENST00000339276 SLC44A3Q8N4M1 653 aa17.52■□□□□ 0.4
SFN-201ENST00000339276 MSANTD4Q8NCY6 345 aa17.52■□□□□ 0.4
SFN-201ENST00000339276 TTC16Q8NEE8 873 aa17.52■□□□□ 0.4
SFN-201ENST00000339276 NXPE3Q969Y0 559 aa17.52■□□□□ 0.4
SFN-201ENST00000339276 FAM149B1Q96BN6 582 aa17.52■□□□□ 0.4
SFN-201ENST00000339276 C18orf8Q96DM3 657 aa17.52■□□□□ 0.4
SFN-201ENST00000339276 ZFRQ96KR1 1074 aaKnown RBP17.52■□□□□ 0.4
SFN-201ENST00000339276 C11orf70Q9BRQ4 267 aa17.52■□□□□ 0.4
SFN-201ENST00000339276 KIF9Q9HAQ2 790 aa17.52■□□□□ 0.4
SFN-201ENST00000339276 ABCC13Q9NSE7 274 aa17.52■□□□□ 0.4
SFN-201ENST00000339276 TAS2R14Q9NYV8 317 aa17.52■□□□□ 0.4
SFN-201ENST00000339276 ARHGAP20Q9P2F6 1191 aa17.52■□□□□ 0.4
SFN-201ENST00000339276 BZW2Q9Y6E2 419 aaKnown RBP17.52■□□□□ 0.4
SFN-201ENST00000339276 A0A0C4DFX4 3053 aa17.52■□□□□ 0.4
SFN-201ENST00000339276 KIF26AQ9ULI4 1882 aaPredicted RBP17.52■□□□□ 0.39
SFN-201ENST00000339276 NARSO43776 548 aaKnown RBP17.51■□□□□ 0.39
SFN-201ENST00000339276 FYNP06241 537 aa17.51■□□□□ 0.39
SFN-201ENST00000339276 ATP5C1P36542 298 aaKnown RBP17.51■□□□□ 0.39
SFN-201ENST00000339276 EFEMP1Q12805 493 aa17.51■□□□□ 0.39
SFN-201ENST00000339276 PTP4A2Q12974 167 aa17.51■□□□□ 0.39
SFN-201ENST00000339276 USP4Q13107 963 aa17.51■□□□□ 0.39
SFN-201ENST00000339276 TDGQ13569 410 aa17.51■□□□□ 0.39
SFN-201ENST00000339276 ZNF77Q15935 545 aa17.51■□□□□ 0.39
SFN-201ENST00000339276 RSRC2Q7L4I2 434 aaKnown RBP17.51■□□□□ 0.39
SFN-201ENST00000339276 CNGA4Q8IV77 575 aa17.51■□□□□ 0.39
SFN-201ENST00000339276 ZNF276Q8N554 614 aa17.51■□□□□ 0.39
SFN-201ENST00000339276 SH3RF2Q8TEC5 729 aa17.51■□□□□ 0.39
SFN-201ENST00000339276 GOLGA1Q92805 767 aa17.51■□□□□ 0.39
SFN-201ENST00000339276 E2F7Q96AV8 911 aa17.51■□□□□ 0.39
SFN-201ENST00000339276 CDK5RAP1Q96SZ6 601 aaKnown RBP17.51■□□□□ 0.39
SFN-201ENST00000339276 OBP2AQ9NY56 170 aa17.51■□□□□ 0.39
SFN-201ENST00000339276 RASAL2Q9UJF2 1139 aa17.51■□□□□ 0.39
SFN-201ENST00000339276 TMCO5BA8MYB1 307 aa17.5■□□□□ 0.39
SFN-201ENST00000339276 LEFTY2O00292 366 aa17.5■□□□□ 0.39
SFN-201ENST00000339276 GRAP2O75791 330 aa17.5■□□□□ 0.39
SFN-201ENST00000339276 CDC25BP30305 580 aa17.5■□□□□ 0.39
SFN-201ENST00000339276 SLC6A3Q01959 620 aa17.5■□□□□ 0.39
SFN-201ENST00000339276 KLHDC10Q6PID8 442 aa17.5■□□□□ 0.39
SFN-201ENST00000339276 TOGARAM2Q6ZUX3 1019 aa17.5■□□□□ 0.39
SFN-201ENST00000339276 MON1BQ7L1V2 547 aa17.5■□□□□ 0.39
SFN-201ENST00000339276 PHLDB2Q86SQ0 1253 aa17.5■□□□□ 0.39
SFN-201ENST00000339276 TADA2BQ86TJ2 420 aa17.5■□□□□ 0.39
SFN-201ENST00000339276 PHF13Q86YI8 300 aaPredicted RBP17.5■□□□□ 0.39
SFN-201ENST00000339276 MIB1Q86YT6 1006 aa17.5■□□□□ 0.39
SFN-201ENST00000339276 ZDHHC17Q8IUH5 632 aa17.5■□□□□ 0.39
SFN-201ENST00000339276 MFSD6LQ8IWD5 586 aa17.5■□□□□ 0.39
SFN-201ENST00000339276 TC2NQ8N9U0 490 aa17.5■□□□□ 0.39
SFN-201ENST00000339276 BPIFB1Q8TDL5 484 aa17.5■□□□□ 0.39
SFN-201ENST00000339276 RNF139Q8WU17 664 aa17.5■□□□□ 0.39
SFN-201ENST00000339276 DEPDC1BQ8WUY9 529 aa17.5■□□□□ 0.39
SFN-201ENST00000339276 KHSRPQ92945 711 aaKnown RBP eCLIP17.5■□□□□ 0.39
SFN-201ENST00000339276 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.5■□□□□ 0.39
SFN-201ENST00000339276 COL25A1Q9BXS0 654 aaPredicted RBP17.5■□□□□ 0.39
SFN-201ENST00000339276 GKN1Q9NS71 199 aa17.5■□□□□ 0.39
SFN-201ENST00000339276 DNMT3LQ9UJW3 386 aa17.5■□□□□ 0.39
SFN-201ENST00000339276 SORCS3Q9UPU3 1222 aa17.5■□□□□ 0.39
SFN-201ENST00000339276 NAALADL1Q9UQQ1 740 aa17.5■□□□□ 0.39
SFN-201ENST00000339276 GOLGA6L3A6NEY3 463 aa17.49■□□□□ 0.39
SFN-201ENST00000339276 GOLGA8SH3BPF8 625 aa17.49■□□□□ 0.39
SFN-201ENST00000339276 SCAMP3O14828 347 aaKnown RBP17.49■□□□□ 0.39
SFN-201ENST00000339276 HSF2BPO75031 334 aa17.49■□□□□ 0.39
SFN-201ENST00000339276 IRF1P10914 325 aa17.49■□□□□ 0.39
SFN-201ENST00000339276 NCAM1P13591 858 aa17.49■□□□□ 0.39
SFN-201ENST00000339276 TCF3P15923 654 aa17.49■□□□□ 0.39
SFN-201ENST00000339276 PSMC3P17980 439 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms