RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 GMIPQ9P107 970 aa16.56■□□□□ 0.24
LINC01116-202ENST00000339037 MBD1Q9UIS9 605 aaPredicted RBP16.56■□□□□ 0.24
LINC01116-202ENST00000339037 MYOFQ9NZM1 2061 aa16.55■□□□□ 0.24
LINC01116-202ENST00000339037 LAMA5O15230 3695 aa16.55■□□□□ 0.24
LINC01116-202ENST00000339037 ATXN2Q99700 1313 aaKnown RBP16.55■□□□□ 0.24
LINC01116-202ENST00000339037 CUTAO60888 179 aa16.55■□□□□ 0.24
LINC01116-202ENST00000339037 AP1G2O75843 785 aa16.55■□□□□ 0.24
LINC01116-202ENST00000339037 YEATS4O95619 227 aa16.55■□□□□ 0.24
LINC01116-202ENST00000339037 ENGP17813 658 aa16.55■□□□□ 0.24
LINC01116-202ENST00000339037 CASP1P29466 404 aa16.55■□□□□ 0.24
LINC01116-202ENST00000339037 HOXD12P35452 270 aa16.55■□□□□ 0.24
LINC01116-202ENST00000339037 AP3M2P53677 418 aa16.55■□□□□ 0.24
LINC01116-202ENST00000339037 NCOA4Q13772 614 aa16.55■□□□□ 0.24
LINC01116-202ENST00000339037 KNOP1Q1ED39 458 aaKnown RBP16.55■□□□□ 0.24
LINC01116-202ENST00000339037 ZNF667Q5HYK9 610 aa16.55■□□□□ 0.24
LINC01116-202ENST00000339037 C10orf76Q5T2E6 689 aa16.55■□□□□ 0.24
LINC01116-202ENST00000339037 PAQR9Q6ZVX9 377 aa16.55■□□□□ 0.24
LINC01116-202ENST00000339037 TERB1Q8NA31 727 aa16.55■□□□□ 0.24
LINC01116-202ENST00000339037 GOLGA5Q8TBA6 731 aa16.55■□□□□ 0.24
LINC01116-202ENST00000339037 ADAM33Q9BZ11 813 aa16.55■□□□□ 0.24
LINC01116-202ENST00000339037 BLZF1Q9H2G9 400 aa16.55■□□□□ 0.24
LINC01116-202ENST00000339037 SLC39A2Q9NP94 309 aa16.55■□□□□ 0.24
LINC01116-202ENST00000339037 SPHK2Q9NRA0 654 aa16.55■□□□□ 0.24
LINC01116-202ENST00000339037 IL37Q9NZH6 218 aa16.55■□□□□ 0.24
LINC01116-202ENST00000339037 ITPR1Q14643 2758 aa16.54■□□□□ 0.24
LINC01116-202ENST00000339037 FAM92AA1XBS5 289 aa16.54■□□□□ 0.24
LINC01116-202ENST00000339037 POLR2DO15514 142 aaKnown RBP16.54■□□□□ 0.24
LINC01116-202ENST00000339037 AP5Z1O43299 807 aa16.54■□□□□ 0.24
LINC01116-202ENST00000339037 F13A1P00488 732 aa16.54■□□□□ 0.24
LINC01116-202ENST00000339037 CFIP05156 583 aa16.54■□□□□ 0.24
LINC01116-202ENST00000339037 ZDHHC11BP0C7U3 371 aa16.54■□□□□ 0.24
LINC01116-202ENST00000339037 ZSCAN22P10073 491 aaPredicted RBP16.54■□□□□ 0.24
LINC01116-202ENST00000339037 IRF1P10914 325 aa16.54■□□□□ 0.24
LINC01116-202ENST00000339037 HOXB2P14652 356 aa16.54■□□□□ 0.24
LINC01116-202ENST00000339037 ITPKAP23677 461 aa16.54■□□□□ 0.24
LINC01116-202ENST00000339037 RPL6Q02878 288 aaKnown RBP16.54■□□□□ 0.24
LINC01116-202ENST00000339037 PKP1Q13835 747 aa16.54■□□□□ 0.24
LINC01116-202ENST00000339037 SLC23A3Q6PIS1 610 aa16.54■□□□□ 0.24
LINC01116-202ENST00000339037 TMEM25Q86YD3 366 aa16.54■□□□□ 0.24
LINC01116-202ENST00000339037 FUKQ8N0W3 1084 aa16.54■□□□□ 0.24
LINC01116-202ENST00000339037 SLC32A1Q9H598 525 aa16.54■□□□□ 0.24
LINC01116-202ENST00000339037 COMMD8Q9NX08 183 aa16.54■□□□□ 0.24
LINC01116-202ENST00000339037 CALCOCO1Q9P1Z2 691 aa16.54■□□□□ 0.24
LINC01116-202ENST00000339037 PILRBQ9UKJ0 227 aa16.54■□□□□ 0.24
LINC01116-202ENST00000339037 ZMIZ1Q9ULJ6 1067 aa16.54■□□□□ 0.24
LINC01116-202ENST00000339037 MYO18AQ92614 2054 aaKnown RBP16.54■□□□□ 0.24
LINC01116-202ENST00000339037 LRRIQ3A6PVS8 624 aaPredicted RBP16.53■□□□□ 0.24
LINC01116-202ENST00000339037 TLR5O60602 858 aa16.53■□□□□ 0.24
LINC01116-202ENST00000339037 TOP3BO95985 862 aaKnown RBP16.53■□□□□ 0.24
LINC01116-202ENST00000339037 P4HA1P13674 534 aa16.53■□□□□ 0.24
LINC01116-202ENST00000339037 ATXN3P54252 364 aaPredicted RBP16.53■□□□□ 0.24
LINC01116-202ENST00000339037 CLDN10P78369 228 aa16.53■□□□□ 0.24
LINC01116-202ENST00000339037 PEAR1Q5VY43 1037 aaPredicted RBP16.53■□□□□ 0.24
LINC01116-202ENST00000339037 ACOT1Q86TX2 421 aa16.53■□□□□ 0.24
LINC01116-202ENST00000339037 KDF1Q8NAX2 398 aaPredicted RBP16.53■□□□□ 0.24
LINC01116-202ENST00000339037 PLEKHO2Q8TD55 490 aa16.53■□□□□ 0.24
LINC01116-202ENST00000339037 PARD3BQ8TEW8 1205 aa16.53■□□□□ 0.24
LINC01116-202ENST00000339037 SCNM1Q9BWG6 230 aa16.53■□□□□ 0.24
LINC01116-202ENST00000339037 SDCBP2Q9H190 292 aa16.53■□□□□ 0.24
LINC01116-202ENST00000339037 FBXO44Q9H4M3 255 aa16.53■□□□□ 0.24
LINC01116-202ENST00000339037 RALYQ9UKM9 306 aaKnown RBP16.53■□□□□ 0.24
LINC01116-202ENST00000339037 PI4KAP42356 2102 aa16.52■□□□□ 0.24
LINC01116-202ENST00000339037 MYH10P35580 1976 aa16.52■□□□□ 0.24
LINC01116-202ENST00000339037 PVALEFA0A1B0GWK0 134 aa16.52■□□□□ 0.24
LINC01116-202ENST00000339037 TRIM24O15164 1050 aa16.52■□□□□ 0.24
LINC01116-202ENST00000339037 ZBTB24O43167 697 aaPredicted RBP16.52■□□□□ 0.24
LINC01116-202ENST00000339037 HSP90AA1P07900 732 aaKnown RBP16.52■□□□□ 0.24
LINC01116-202ENST00000339037 CCDC130P13994 396 aa16.52■□□□□ 0.24
LINC01116-202ENST00000339037 GABRG2P18507 467 aa16.52■□□□□ 0.24
LINC01116-202ENST00000339037 NTSR1P30989 418 aa16.52■□□□□ 0.24
LINC01116-202ENST00000339037 GRAMD4Q6IC98 578 aa16.52■□□□□ 0.24
LINC01116-202ENST00000339037 SLC36A4Q6YBV0 504 aa16.52■□□□□ 0.24
LINC01116-202ENST00000339037 MIB1Q86YT6 1006 aa16.52■□□□□ 0.24
LINC01116-202ENST00000339037 CEP76Q8TAP6 659 aa16.52■□□□□ 0.24
LINC01116-202ENST00000339037 SLC2A14Q8TDB8 520 aa16.52■□□□□ 0.24
LINC01116-202ENST00000339037 WBP2Q969T9 261 aa16.52■□□□□ 0.24
LINC01116-202ENST00000339037 ELMO3Q96BJ8 720 aa16.52■□□□□ 0.24
LINC01116-202ENST00000339037 TLR8Q9NR97 1041 aaKnown RBP16.52■□□□□ 0.24
LINC01116-202ENST00000339037 DNAJC17Q9NVM6 304 aaKnown RBP16.52■□□□□ 0.24
LINC01116-202ENST00000339037 STARD13Q9Y3M8 1113 aa16.52■□□□□ 0.24
LINC01116-202ENST00000339037 PLXND1Q9Y4D7 1925 aa16.52■□□□□ 0.23
LINC01116-202ENST00000339037 A0A1W2PQF6 199 aa16.51■□□□□ 0.23
LINC01116-202ENST00000339037 TMEM8BA6NDV4 472 aa16.51■□□□□ 0.23
LINC01116-202ENST00000339037 NEDD8-MDP1E9PL57 170 aa16.51■□□□□ 0.23
LINC01116-202ENST00000339037 BEST1O76090 585 aa16.51■□□□□ 0.23
LINC01116-202ENST00000339037 VNN1O95497 513 aa16.51■□□□□ 0.23
LINC01116-202ENST00000339037 TBX18O95935 607 aa16.51■□□□□ 0.23
LINC01116-202ENST00000339037 WASP42768 502 aa16.51■□□□□ 0.23
LINC01116-202ENST00000339037 AFMP43652 599 aa16.51■□□□□ 0.23
LINC01116-202ENST00000339037 PGFP49763 221 aa16.51■□□□□ 0.23
LINC01116-202ENST00000339037 MAP3K7CLP57077 242 aa16.51■□□□□ 0.23
LINC01116-202ENST00000339037 GFPT1Q06210 699 aaPredicted RBP16.51■□□□□ 0.23
LINC01116-202ENST00000339037 GOLGA8FQ08AF8 430 aa16.51■□□□□ 0.23
LINC01116-202ENST00000339037 GOLGA8DPQ0D2H9 430 aa16.51■□□□□ 0.23
LINC01116-202ENST00000339037 ORC1Q13415 861 aa16.51■□□□□ 0.23
LINC01116-202ENST00000339037 CUL4BQ13620 913 aa16.51■□□□□ 0.23
LINC01116-202ENST00000339037 DUOXA1Q1HG43 343 aa16.51■□□□□ 0.23
LINC01116-202ENST00000339037 EGFLAMQ63HQ2 1017 aa16.51■□□□□ 0.23
LINC01116-202ENST00000339037 SDE2Q6IQ49 451 aa16.51■□□□□ 0.23
LINC01116-202ENST00000339037 KIAA1211LQ6NV74 962 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms