RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 RGMBQ6NW40 437 aa19.54■□□□□ 0.72
PSPC1-201ENST00000338910 RHOT1Q8IXI2 618 aa19.54■□□□□ 0.72
PSPC1-201ENST00000338910 ZBED8Q8IZ13 594 aa19.54■□□□□ 0.72
PSPC1-201ENST00000338910 VPS11Q9H270 941 aa19.54■□□□□ 0.72
PSPC1-201ENST00000338910 KCNK13Q9HB14 408 aa19.54■□□□□ 0.72
PSPC1-201ENST00000338910 SETD4Q9NVD3 440 aa19.54■□□□□ 0.72
PSPC1-201ENST00000338910 TRPM7Q96QT4 1865 aa19.54■□□□□ 0.72
PSPC1-201ENST00000338910 A8MXQ7 604 aa19.54■□□□□ 0.72
PSPC1-201ENST00000338910 ZSCAN5DPP0CG00 497 aa19.54■□□□□ 0.72
PSPC1-201ENST00000338910 RARBP10826 455 aa19.54■□□□□ 0.72
PSPC1-201ENST00000338910 HOXD8P13378 290 aaPredicted RBP19.54■□□□□ 0.72
PSPC1-201ENST00000338910 GSTT1P30711 240 aa19.54■□□□□ 0.72
PSPC1-201ENST00000338910 CDK16Q00536 496 aa19.54■□□□□ 0.72
PSPC1-201ENST00000338910 TMEM62Q0P6H9 643 aa19.54■□□□□ 0.72
PSPC1-201ENST00000338910 RBM41Q96IZ5 413 aaKnown RBP19.54■□□□□ 0.72
PSPC1-201ENST00000338910 IRAK4Q9NWZ3 460 aa19.54■□□□□ 0.72
PSPC1-201ENST00000338910 COL1A2P08123 1366 aa19.54■□□□□ 0.72
PSPC1-201ENST00000338910 LIASO43766 372 aa19.53■□□□□ 0.72
PSPC1-201ENST00000338910 LYNP07948 512 aa19.53■□□□□ 0.72
PSPC1-201ENST00000338910 ARFIP2P53365 341 aa19.53■□□□□ 0.72
PSPC1-201ENST00000338910 IFNLR1Q8IU57 520 aaPredicted RBP19.53■□□□□ 0.72
PSPC1-201ENST00000338910 KIAA0319LQ8IZA0 1049 aa19.53■□□□□ 0.72
PSPC1-201ENST00000338910 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.53■□□□□ 0.72
PSPC1-201ENST00000338910 TCP10LQ8TDR4 215 aa19.53■□□□□ 0.72
PSPC1-201ENST00000338910 NCSTNQ92542 709 aa19.53■□□□□ 0.72
PSPC1-201ENST00000338910 MANSC1Q9H8J5 431 aa19.53■□□□□ 0.72
PSPC1-201ENST00000338910 DNPEPQ9ULA0 475 aa19.53■□□□□ 0.72
PSPC1-201ENST00000338910 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.53■□□□□ 0.72
PSPC1-201ENST00000338910 CYP2B6P20813 491 aa19.53■□□□□ 0.72
PSPC1-201ENST00000338910 NEK3P51956 506 aa19.53■□□□□ 0.72
PSPC1-201ENST00000338910 GEMIN4P57678 1058 aaKnown RBP19.53■□□□□ 0.72
PSPC1-201ENST00000338910 THOC5Q13769 683 aaKnown RBP19.53■□□□□ 0.72
PSPC1-201ENST00000338910 MORF4L2Q15014 288 aa19.53■□□□□ 0.72
PSPC1-201ENST00000338910 ATP13A4Q4VNC1 1196 aa19.53■□□□□ 0.72
PSPC1-201ENST00000338910 CYP4A22Q5TCH4 519 aa19.53■□□□□ 0.72
PSPC1-201ENST00000338910 PPP1R2P3Q6NXS1 205 aa19.53■□□□□ 0.72
PSPC1-201ENST00000338910 PDCD7Q8N8D1 485 aaKnown RBP19.53■□□□□ 0.72
PSPC1-201ENST00000338910 EXD1Q8NHP7 514 aa19.53■□□□□ 0.72
PSPC1-201ENST00000338910 ITFG2Q969R8 447 aa19.53■□□□□ 0.72
PSPC1-201ENST00000338910 MCEEQ96PE7 176 aa19.53■□□□□ 0.72
PSPC1-201ENST00000338910 SDCBP2Q9H190 292 aa19.53■□□□□ 0.72
PSPC1-201ENST00000338910 MTO1Q9Y2Z2 717 aaKnown RBP19.53■□□□□ 0.72
PSPC1-201ENST00000338910 MGAMO43451 1857 aa19.52■□□□□ 0.72
PSPC1-201ENST00000338910 TM9SF1O15321 606 aa19.52■□□□□ 0.72
PSPC1-201ENST00000338910 LSM8O95777 96 aaKnown RBP19.52■□□□□ 0.72
PSPC1-201ENST00000338910 CALB1P05937 261 aa19.52■□□□□ 0.72
PSPC1-201ENST00000338910 UBTFL6P0CB48 400 aaPredicted RBP19.52■□□□□ 0.72
PSPC1-201ENST00000338910 TCF4P15884 667 aa19.52■□□□□ 0.72
PSPC1-201ENST00000338910 ARSEP51690 589 aa19.52■□□□□ 0.72
PSPC1-201ENST00000338910 GPX6P59796 221 aa19.52■□□□□ 0.72
PSPC1-201ENST00000338910 GPS1Q13098 491 aa19.52■□□□□ 0.72
PSPC1-201ENST00000338910 KIZQ2M2Z5 673 aa19.52■□□□□ 0.72
PSPC1-201ENST00000338910 DENND1BQ6P3S1 775 aa19.52■□□□□ 0.72
PSPC1-201ENST00000338910 DCUN1D2Q6PH85 259 aa19.52■□□□□ 0.72
PSPC1-201ENST00000338910 C17orf99Q6UX52 265 aa19.52■□□□□ 0.72
PSPC1-201ENST00000338910 IFNL1Q8IU54 200 aa19.52■□□□□ 0.72
PSPC1-201ENST00000338910 SMYD3Q9H7B4 428 aa19.52■□□□□ 0.72
PSPC1-201ENST00000338910 KLHL11Q9NVR0 708 aa19.52■□□□□ 0.72
PSPC1-201ENST00000338910 FETUBQ9UGM5 382 aa19.52■□□□□ 0.72
PSPC1-201ENST00000338910 TMEM191CA6NGB0 347 aa19.52■□□□□ 0.71
PSPC1-201ENST00000338910 TSPAN1O60635 241 aa19.52■□□□□ 0.71
PSPC1-201ENST00000338910 ESRRAP11474 423 aaPredicted RBP19.52■□□□□ 0.71
PSPC1-201ENST00000338910 ETS1P14921 441 aa19.52■□□□□ 0.71
PSPC1-201ENST00000338910 AMPD1P23109 780 aa19.52■□□□□ 0.71
PSPC1-201ENST00000338910 PSMC4P43686 418 aa19.52■□□□□ 0.71
PSPC1-201ENST00000338910 RAP1GDS1P52306 607 aa19.52■□□□□ 0.71
PSPC1-201ENST00000338910 SEPT7Q16181 437 aaKnown RBP19.52■□□□□ 0.71
PSPC1-201ENST00000338910 ZFYVE27Q5T4F4 411 aa19.52■□□□□ 0.71
PSPC1-201ENST00000338910 OLFML2BQ68BL8 750 aa19.52■□□□□ 0.71
PSPC1-201ENST00000338910 DNAJC24Q6P3W2 148 aa19.52■□□□□ 0.71
PSPC1-201ENST00000338910 CENPUQ71F23 418 aa19.52■□□□□ 0.71
PSPC1-201ENST00000338910 LRRC6Q86X45 466 aa19.52■□□□□ 0.71
PSPC1-201ENST00000338910 ARHGAP18Q8N392 663 aa19.52■□□□□ 0.71
PSPC1-201ENST00000338910 MZB1Q8WU39 189 aa19.52■□□□□ 0.71
PSPC1-201ENST00000338910 DDX50Q9BQ39 737 aaKnown RBP19.52■□□□□ 0.71
PSPC1-201ENST00000338910 TSSK1BQ9BXA7 367 aa19.52■□□□□ 0.71
PSPC1-201ENST00000338910 TMEM120AQ9BXJ8 343 aa19.52■□□□□ 0.71
PSPC1-201ENST00000338910 FAM49AQ9H0Q0 323 aaPredicted RBP19.52■□□□□ 0.71
PSPC1-201ENST00000338910 C12orf65Q9H3J6 166 aaKnown RBP19.52■□□□□ 0.71
PSPC1-201ENST00000338910 SLC17A7Q9P2U7 560 aa19.52■□□□□ 0.71
PSPC1-201ENST00000338910 IP6K2Q9UHH9 426 aa19.52■□□□□ 0.71
PSPC1-201ENST00000338910 RABGEF1Q9UJ41 708 aa19.52■□□□□ 0.71
PSPC1-201ENST00000338910 GNEQ9Y223 722 aaKnown RBP19.52■□□□□ 0.71
PSPC1-201ENST00000338910 A6NJR5 290 aa19.51■□□□□ 0.71
PSPC1-201ENST00000338910 F8VP50 259 aa19.51■□□□□ 0.71
PSPC1-201ENST00000338910 TGDSO95455 350 aa19.51■□□□□ 0.71
PSPC1-201ENST00000338910 DLDP09622 509 aaKnown RBP19.51■□□□□ 0.71
PSPC1-201ENST00000338910 EIF4BP23588 611 aaKnown RBP19.51■□□□□ 0.71
PSPC1-201ENST00000338910 ZBTB16Q05516 673 aa19.51■□□□□ 0.71
PSPC1-201ENST00000338910 PDIA2Q13087 525 aaKnown RBP19.51■□□□□ 0.71
PSPC1-201ENST00000338910 RNASEH2BQ5TBB1 312 aaKnown RBP19.51■□□□□ 0.71
PSPC1-201ENST00000338910 DRICH1Q6PGQ1 229 aaPredicted RBP19.51■□□□□ 0.71
PSPC1-201ENST00000338910 ALLCQ8N6M5 410 aa19.51■□□□□ 0.71
PSPC1-201ENST00000338910 BANPQ8N9N5 519 aa19.51■□□□□ 0.71
PSPC1-201ENST00000338910 DTNBP1Q96EV8 351 aa19.51■□□□□ 0.71
PSPC1-201ENST00000338910 DHRS4Q9BTZ2 278 aa19.51■□□□□ 0.71
PSPC1-201ENST00000338910 CCDC28BQ9BUN5 200 aa19.51■□□□□ 0.71
PSPC1-201ENST00000338910 ARHGEF4Q9NR80 690 aa19.51■□□□□ 0.71
PSPC1-201ENST00000338910 CLUHO75153 1309 aa19.51■□□□□ 0.71
PSPC1-201ENST00000338910 POLR2BP30876 1174 aaKnown RBP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms