RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 STRA8Q7Z7C7 330 aa12.12□□□□□ -0.47
SHANK2-201ENST00000338508 RTL3Q8N8U3 475 aaKnown RBP12.12□□□□□ -0.47
SHANK2-201ENST00000338508 USP13Q92995 863 aaPredicted RBP12.12□□□□□ -0.47
SHANK2-201ENST00000338508 PLEKHF1Q96S99 279 aa12.12□□□□□ -0.47
SHANK2-201ENST00000338508 KCTD14Q9BQ13 255 aaPredicted RBP12.12□□□□□ -0.47
SHANK2-201ENST00000338508 ELOVL6Q9H5J4 265 aa12.12□□□□□ -0.47
SHANK2-201ENST00000338508 RBM12Q9NTZ6 932 aaKnown RBP12.12□□□□□ -0.47
SHANK2-201ENST00000338508 GCC2Q8IWJ2 1684 aa12.12□□□□□ -0.47
SHANK2-201ENST00000338508 HBP1O60381 514 aa12.12□□□□□ -0.47
SHANK2-201ENST00000338508 GEMIN4P57678 1058 aaKnown RBP12.12□□□□□ -0.47
SHANK2-201ENST00000338508 NR6A1Q15406 480 aa12.12□□□□□ -0.47
SHANK2-201ENST00000338508 SP8Q8IXZ3 490 aa12.12□□□□□ -0.47
SHANK2-201ENST00000338508 CYP4Z2PQ8N1L4 340 aa12.12□□□□□ -0.47
SHANK2-201ENST00000338508 CSGALNACT1Q8TDX6 532 aa12.12□□□□□ -0.47
SHANK2-201ENST00000338508 FAM84BQ96KN1 310 aaPredicted RBP12.12□□□□□ -0.47
SHANK2-201ENST00000338508 EMILIN2Q9BXX0 1053 aa12.12□□□□□ -0.47
SHANK2-201ENST00000338508 SNX12Q9UMY4 172 aa12.12□□□□□ -0.47
SHANK2-201ENST00000338508 LYVE1Q9Y5Y7 322 aa12.12□□□□□ -0.47
SHANK2-201ENST00000338508 NLRP1Q9C000 1473 aa12.12□□□□□ -0.47
SHANK2-201ENST00000338508 AP3D1O14617 1153 aa12.12□□□□□ -0.47
SHANK2-201ENST00000338508 TBX3O15119 743 aa12.12□□□□□ -0.47
SHANK2-201ENST00000338508 ZNF862O60290 1169 aa12.12□□□□□ -0.47
SHANK2-201ENST00000338508 KLHL41O60662 606 aa12.12□□□□□ -0.47
SHANK2-201ENST00000338508 PSMB9P28065 219 aa12.12□□□□□ -0.47
SHANK2-201ENST00000338508 ATP2C1P98194 919 aaPredicted RBP12.12□□□□□ -0.47
SHANK2-201ENST00000338508 PPIL6Q8IXY8 311 aa12.12□□□□□ -0.47
SHANK2-201ENST00000338508 ADGRF2Q8IZF7 708 aa12.12□□□□□ -0.47
SHANK2-201ENST00000338508 ACTR8Q9H981 624 aa12.12□□□□□ -0.47
SHANK2-201ENST00000338508 MYOZ2Q9NPC6 264 aa12.12□□□□□ -0.47
SHANK2-201ENST00000338508 TBKBP1A7MCY6 615 aa12.12□□□□□ -0.47
SHANK2-201ENST00000338508 C4BPBP20851 252 aa12.12□□□□□ -0.47
SHANK2-201ENST00000338508 ARMC4Q5T2S8 1044 aa12.12□□□□□ -0.47
SHANK2-201ENST00000338508 ELMO3Q96BJ8 720 aa12.12□□□□□ -0.47
SHANK2-201ENST00000338508 RPAP1Q9BWH6 1393 aaPredicted RBP12.12□□□□□ -0.47
SHANK2-201ENST00000338508 DYTNA2CJ06 578 aa12.12□□□□□ -0.47
SHANK2-201ENST00000338508 SMIM22K7EJ46 135 aa12.12□□□□□ -0.47
SHANK2-201ENST00000338508 CNOT3O75175 753 aaKnown RBP12.12□□□□□ -0.47
SHANK2-201ENST00000338508 FGRP09769 529 aa12.12□□□□□ -0.47
SHANK2-201ENST00000338508 GEMP55040 296 aa12.12□□□□□ -0.47
SHANK2-201ENST00000338508 BARGINQ6ZT62 677 aa12.12□□□□□ -0.47
SHANK2-201ENST00000338508 BRINP3Q76B58 766 aa12.12□□□□□ -0.47
SHANK2-201ENST00000338508 HERC6Q8IVU3 1022 aa12.12□□□□□ -0.47
SHANK2-201ENST00000338508 FAM20CQ8IXL6 584 aa12.12□□□□□ -0.47
SHANK2-201ENST00000338508 EDEM1Q92611 657 aa12.12□□□□□ -0.47
SHANK2-201ENST00000338508 SLC9A7Q96T83 725 aa12.12□□□□□ -0.47
SHANK2-201ENST00000338508 OSBPL5Q9H0X9 879 aaPredicted RBP12.12□□□□□ -0.47
SHANK2-201ENST00000338508 DUSP12Q9UNI6 340 aa12.12□□□□□ -0.47
SHANK2-201ENST00000338508 ABCA5Q8WWZ7 1642 aa12.11□□□□□ -0.47
SHANK2-201ENST00000338508 H7C1W4 665 aa12.11□□□□□ -0.47
SHANK2-201ENST00000338508 TRIM24O15164 1050 aa12.11□□□□□ -0.47
SHANK2-201ENST00000338508 RPN2P04844 631 aa12.11□□□□□ -0.47
SHANK2-201ENST00000338508 ZNF24P17028 368 aa12.11□□□□□ -0.47
SHANK2-201ENST00000338508 PRKAG1P54619 331 aa12.11□□□□□ -0.47
SHANK2-201ENST00000338508 C1DQ13901 141 aaKnown RBP12.11□□□□□ -0.47
SHANK2-201ENST00000338508 SAPCD2Q86UD0 394 aa12.11□□□□□ -0.47
SHANK2-201ENST00000338508 ZSCAN18Q8TBC5 510 aaPredicted RBP12.11□□□□□ -0.47
SHANK2-201ENST00000338508 TMC2Q8TDI7 906 aa12.11□□□□□ -0.47
SHANK2-201ENST00000338508 ATG4AQ8WYN0 398 aa12.11□□□□□ -0.47
SHANK2-201ENST00000338508 FLT1P17948 1338 aa12.11□□□□□ -0.47
SHANK2-201ENST00000338508 ARHGEF12Q9NZN5 1544 aa12.11□□□□□ -0.47
SHANK2-201ENST00000338508 MYMKA6NI61 221 aa12.11□□□□□ -0.47
SHANK2-201ENST00000338508 VAV1P15498 845 aa12.11□□□□□ -0.47
SHANK2-201ENST00000338508 PPP2R1BP30154 601 aa12.11□□□□□ -0.47
SHANK2-201ENST00000338508 POU6F1Q14863 301 aa12.11□□□□□ -0.47
SHANK2-201ENST00000338508 OTUD3Q5T2D3 398 aaPredicted RBP12.11□□□□□ -0.47
SHANK2-201ENST00000338508 TRIQKQ629K1 86 aa12.11□□□□□ -0.47
SHANK2-201ENST00000338508 FBXO16Q8IX29 292 aaPredicted RBP12.11□□□□□ -0.47
SHANK2-201ENST00000338508 TMEM8AQ9HCN3 771 aa12.11□□□□□ -0.47
SHANK2-201ENST00000338508 WDR19Q8NEZ3 1342 aa12.11□□□□□ -0.47
SHANK2-201ENST00000338508 LOC102724159A0A0B4J2E5 919 aa12.11□□□□□ -0.47
SHANK2-201ENST00000338508 GARTP22102 1010 aa12.11□□□□□ -0.47
SHANK2-201ENST00000338508 CLCN3P51790 818 aa12.11□□□□□ -0.47
SHANK2-201ENST00000338508 PWP2Q15269 919 aaKnown RBP12.11□□□□□ -0.47
SHANK2-201ENST00000338508 ATAD3BQ5T9A4 648 aa12.11□□□□□ -0.47
SHANK2-201ENST00000338508 SLFN11Q7Z7L1 901 aa12.11□□□□□ -0.47
SHANK2-201ENST00000338508 TAAR1Q96RJ0 339 aa12.11□□□□□ -0.47
SHANK2-201ENST00000338508 NLNQ9BYT8 704 aa12.11□□□□□ -0.47
SHANK2-201ENST00000338508 PRMT7Q9NVM4 692 aaPredicted RBP12.11□□□□□ -0.47
SHANK2-201ENST00000338508 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.11□□□□□ -0.47
SHANK2-201ENST00000338508 FAM153AQ9UHL3 310 aa12.11□□□□□ -0.47
SHANK2-201ENST00000338508 RBM7Q9Y580 266 aaKnown RBP12.11□□□□□ -0.47
SHANK2-201ENST00000338508 PCDHGA3Q9Y5H0 932 aa12.11□□□□□ -0.47
SHANK2-201ENST00000338508 C19orf81C9J6K1 198 aa12.11□□□□□ -0.47
SHANK2-201ENST00000338508 SCAMP3O14828 347 aaKnown RBP12.11□□□□□ -0.47
SHANK2-201ENST00000338508 ZNF189O75820 626 aaPredicted RBP12.11□□□□□ -0.47
SHANK2-201ENST00000338508 MAGEA10P43363 369 aaPredicted RBP12.11□□□□□ -0.47
SHANK2-201ENST00000338508 CASP4P49662 377 aa12.11□□□□□ -0.47
SHANK2-201ENST00000338508 BIKQ13323 160 aa12.11□□□□□ -0.47
SHANK2-201ENST00000338508 SLC29A2Q14542 456 aa12.11□□□□□ -0.47
SHANK2-201ENST00000338508 AGGF1Q8N302 714 aaeCLIP12.11□□□□□ -0.472e-7■■■■■ 29
SHANK2-201ENST00000338508 DPF2Q92785 391 aa12.11□□□□□ -0.47
SHANK2-201ENST00000338508 CELF6Q96J87 481 aaKnown RBP12.11□□□□□ -0.47
SHANK2-201ENST00000338508 ADGRE3Q9BY15 652 aa12.11□□□□□ -0.47
SHANK2-201ENST00000338508 ARMC7Q9H6L4 198 aa12.11□□□□□ -0.47
SHANK2-201ENST00000338508 HAO1Q9UJM8 370 aa12.11□□□□□ -0.47
SHANK2-201ENST00000338508 CHKBQ9Y259 395 aa12.11□□□□□ -0.47
SHANK2-201ENST00000338508 SH3GLB1Q9Y371 365 aa12.11□□□□□ -0.47
SHANK2-201ENST00000338508 ROBO2Q9HCK4 1378 aa12.11□□□□□ -0.47
SHANK2-201ENST00000338508 NDUFS2O75306 463 aa12.11□□□□□ -0.47
SHANK2-201ENST00000338508 DSG1Q02413 1049 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms