RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 XPO6Q96QU8 1125 aaKnown RBP12.17□□□□□ -0.46
CSMD2-202ENST00000338325 LRRC27Q9C0I9 530 aa12.17□□□□□ -0.46
CSMD2-202ENST00000338325 NACA2Q9H009 215 aa12.17□□□□□ -0.46
CSMD2-202ENST00000338325 XYLT2Q9H1B5 865 aa12.17□□□□□ -0.46
CSMD2-202ENST00000338325 SMYD3Q9H7B4 428 aa12.17□□□□□ -0.46
CSMD2-202ENST00000338325 CD248Q9HCU0 757 aa12.17□□□□□ -0.46
CSMD2-202ENST00000338325 UBE4BO95155 1302 aa12.17□□□□□ -0.46
CSMD2-202ENST00000338325 PLXNB3Q9ULL4 1909 aa12.17□□□□□ -0.46
CSMD2-202ENST00000338325 PTPRBP23467 1997 aa12.17□□□□□ -0.46
CSMD2-202ENST00000338325 TAF4O00268 1085 aa12.16□□□□□ -0.46
CSMD2-202ENST00000338325 CLIC2O15247 247 aa12.16□□□□□ -0.46
CSMD2-202ENST00000338325 TGFB1I1O43294 461 aa12.16□□□□□ -0.46
CSMD2-202ENST00000338325 CACNG3O60359 315 aa12.16□□□□□ -0.46
CSMD2-202ENST00000338325 GJB3O75712 270 aa12.16□□□□□ -0.46
CSMD2-202ENST00000338325 SLC39A14Q15043 492 aa12.16□□□□□ -0.46
CSMD2-202ENST00000338325 PAQR9Q6ZVX9 377 aa12.16□□□□□ -0.46
CSMD2-202ENST00000338325 HTR3DQ70Z44 454 aa12.16□□□□□ -0.46
CSMD2-202ENST00000338325 RGL4Q8IZJ4 473 aa12.16□□□□□ -0.46
CSMD2-202ENST00000338325 XXYLT1Q8NBI6 393 aa12.16□□□□□ -0.46
CSMD2-202ENST00000338325 SCFD1Q8WVM8 642 aa12.16□□□□□ -0.46
CSMD2-202ENST00000338325 ZNF516Q92618 1163 aa12.16□□□□□ -0.46
CSMD2-202ENST00000338325 TNIP3Q96KP6 325 aa12.16□□□□□ -0.46
CSMD2-202ENST00000338325 USP28Q96RU2 1077 aa12.16□□□□□ -0.46
CSMD2-202ENST00000338325 ACOX2Q99424 681 aa12.16□□□□□ -0.46
CSMD2-202ENST00000338325 GABRG3Q99928 467 aa12.16□□□□□ -0.46
CSMD2-202ENST00000338325 TRIM9Q9C026 710 aa12.16□□□□□ -0.46
CSMD2-202ENST00000338325 GZF1Q9H116 711 aaPredicted RBP12.16□□□□□ -0.46
CSMD2-202ENST00000338325 FAM124BQ9H5Z6 455 aaPredicted RBP12.16□□□□□ -0.46
CSMD2-202ENST00000338325 KRT82Q9NSB4 513 aa12.16□□□□□ -0.46
CSMD2-202ENST00000338325 SUSD2Q9UGT4 822 aa12.16□□□□□ -0.46
CSMD2-202ENST00000338325 FREM2Q5SZK8 3169 aa12.16□□□□□ -0.46
CSMD2-202ENST00000338325 ITPR1Q14643 2758 aa12.16□□□□□ -0.46
CSMD2-202ENST00000338325 NEDD8-MDP1E9PL57 170 aa12.16□□□□□ -0.46
CSMD2-202ENST00000338325 TLR5O60602 858 aa12.16□□□□□ -0.46
CSMD2-202ENST00000338325 PHACTR2O75167 634 aa12.16□□□□□ -0.46
CSMD2-202ENST00000338325 NDUFS2O75306 463 aa12.16□□□□□ -0.46
CSMD2-202ENST00000338325 AP1G2O75843 785 aa12.16□□□□□ -0.46
CSMD2-202ENST00000338325 CAPNS1P04632 268 aa12.16□□□□□ -0.46
CSMD2-202ENST00000338325 TYRP14679 529 aa12.16□□□□□ -0.46
CSMD2-202ENST00000338325 CDH8P55286 799 aa12.16□□□□□ -0.46
CSMD2-202ENST00000338325 SNRPFP62306 86 aaKnown RBP12.16□□□□□ -0.46
CSMD2-202ENST00000338325 ASIC1P78348 528 aa12.16□□□□□ -0.46
CSMD2-202ENST00000338325 CUL4AQ13619 759 aa12.16□□□□□ -0.46
CSMD2-202ENST00000338325 TRIP6Q15654 476 aaKnown RBP12.16□□□□□ -0.46
CSMD2-202ENST00000338325 ZNF699Q32M78 642 aa12.16□□□□□ -0.46
CSMD2-202ENST00000338325 PLEKHG6Q3KR16 790 aa12.16□□□□□ -0.46
CSMD2-202ENST00000338325 FAM26FQ5R3K3 315 aa12.16□□□□□ -0.46
CSMD2-202ENST00000338325 SYCP2LQ5T4T6 812 aa12.16□□□□□ -0.46
CSMD2-202ENST00000338325 NAXDQ8IW45 347 aa12.16□□□□□ -0.46
CSMD2-202ENST00000338325 FOXJ1Q92949 421 aa12.16□□□□□ -0.46
CSMD2-202ENST00000338325 ERLEC1Q96DZ1 483 aa12.16□□□□□ -0.46
CSMD2-202ENST00000338325 ZNF419Q96HQ0 510 aaPredicted RBP12.16□□□□□ -0.46
CSMD2-202ENST00000338325 CAMK1GQ96NX5 476 aa12.16□□□□□ -0.46
CSMD2-202ENST00000338325 BBS2Q9BXC9 721 aa12.16□□□□□ -0.46
CSMD2-202ENST00000338325 CUEDC2Q9H467 287 aa12.16□□□□□ -0.46
CSMD2-202ENST00000338325 VRTNQ9H8Y1 702 aa12.16□□□□□ -0.46
CSMD2-202ENST00000338325 UPF2Q9HAU5 1272 aaKnown RBP12.16□□□□□ -0.46
CSMD2-202ENST00000338325 CD93Q9NPY3 652 aa12.16□□□□□ -0.46
CSMD2-202ENST00000338325 KBTBD4Q9NVX7 518 aa12.16□□□□□ -0.46
CSMD2-202ENST00000338325 MARK1Q9P0L2 795 aa12.16□□□□□ -0.46
CSMD2-202ENST00000338325 WDR35Q9P2L0 1181 aa12.16□□□□□ -0.46
CSMD2-202ENST00000338325 PCDHB9Q9Y5E1 797 aa12.16□□□□□ -0.46
CSMD2-202ENST00000338325 ANKRD11Q6UB99 2663 aaPredicted RBP12.15□□□□□ -0.46
CSMD2-202ENST00000338325 PRRT4C9JH25 899 aa12.15□□□□□ -0.46
CSMD2-202ENST00000338325 SH3BP5O60239 455 aa12.15□□□□□ -0.46
CSMD2-202ENST00000338325 GREM1O60565 184 aa12.15□□□□□ -0.46
CSMD2-202ENST00000338325 CLSTN1O94985 981 aa12.15□□□□□ -0.46
CSMD2-202ENST00000338325 GNSP15586 552 aa12.15□□□□□ -0.46
CSMD2-202ENST00000338325 AMPD3Q01432 767 aa12.15□□□□□ -0.46
CSMD2-202ENST00000338325 GOLGA8FQ08AF8 430 aa12.15□□□□□ -0.46
CSMD2-202ENST00000338325 GOLGA8DPQ0D2H9 430 aa12.15□□□□□ -0.46
CSMD2-202ENST00000338325 SCAPQ12770 1279 aa12.15□□□□□ -0.46
CSMD2-202ENST00000338325 E2F4Q16254 413 aa12.15□□□□□ -0.46
CSMD2-202ENST00000338325 ZNF667Q5HYK9 610 aa12.15□□□□□ -0.46
CSMD2-202ENST00000338325 WDR45BQ5MNZ6 344 aa12.15□□□□□ -0.46
CSMD2-202ENST00000338325 SCARA5Q6ZMJ2 495 aa12.15□□□□□ -0.46
CSMD2-202ENST00000338325 TPGS1Q6ZTW0 290 aa12.15□□□□□ -0.46
CSMD2-202ENST00000338325 TOGARAM2Q6ZUX3 1019 aa12.15□□□□□ -0.46
CSMD2-202ENST00000338325 NELFCDQ8IXH7 590 aa12.15□□□□□ -0.46
CSMD2-202ENST00000338325 FUKQ8N0W3 1084 aa12.15□□□□□ -0.46
CSMD2-202ENST00000338325 ADAMTS14Q8WXS8 1223 aa12.15□□□□□ -0.46
CSMD2-202ENST00000338325 MRGPRX1Q96LB2 322 aa12.15□□□□□ -0.46
CSMD2-202ENST00000338325 KLF16Q9BXK1 252 aaPredicted RBP12.15□□□□□ -0.46
CSMD2-202ENST00000338325 SLC6A17Q9H1V8 727 aa12.15□□□□□ -0.46
CSMD2-202ENST00000338325 FBXO44Q9H4M3 255 aa12.15□□□□□ -0.46
CSMD2-202ENST00000338325 TLR8Q9NR97 1041 aaKnown RBP12.15□□□□□ -0.46
CSMD2-202ENST00000338325 LSM7Q9UK45 103 aaKnown RBP12.15□□□□□ -0.46
CSMD2-202ENST00000338325 RAD54BQ9Y620 910 aa12.15□□□□□ -0.46
CSMD2-202ENST00000338325 GFRA2O00451 464 aa12.14□□□□□ -0.47
CSMD2-202ENST00000338325 FTH1P19P0C7X4 201 aa12.14□□□□□ -0.47
CSMD2-202ENST00000338325 CCDC130P13994 396 aa12.14□□□□□ -0.47
CSMD2-202ENST00000338325 SYT1P21579 422 aa12.14□□□□□ -0.47
CSMD2-202ENST00000338325 DGKGP49619 791 aa12.14□□□□□ -0.47
CSMD2-202ENST00000338325 PGFP49763 221 aa12.14□□□□□ -0.47
CSMD2-202ENST00000338325 GRIK2Q13002 908 aa12.14□□□□□ -0.47
CSMD2-202ENST00000338325 BIRC3Q13489 604 aa12.14□□□□□ -0.47
CSMD2-202ENST00000338325 CNNM4Q6P4Q7 775 aa12.14□□□□□ -0.47
CSMD2-202ENST00000338325 KIAA1324Q6UXG2 1013 aaKnown RBP12.14□□□□□ -0.47
CSMD2-202ENST00000338325 ACOT1Q86TX2 421 aa12.14□□□□□ -0.47
CSMD2-202ENST00000338325 C12orf56Q8IXR9 622 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms