RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 RNF139Q8WU17 664 aa16.12■□□□□ 0.17
SEC13-201ENST00000337354 NACA2Q9H009 215 aa16.12■□□□□ 0.17
SEC13-201ENST00000337354 ISCUQ9H1K1 167 aa16.12■□□□□ 0.17
SEC13-201ENST00000337354 DEF6Q9H4E7 631 aa16.12■□□□□ 0.17
SEC13-201ENST00000337354 ZFP14Q9HCL3 533 aa16.12■□□□□ 0.17
SEC13-201ENST00000337354 TRPC7Q9HCX4 862 aa16.12■□□□□ 0.17
SEC13-201ENST00000337354 OLA1Q9NTK5 396 aaKnown RBP16.12■□□□□ 0.17
SEC13-201ENST00000337354 OSER1Q9NX31 292 aa16.12■□□□□ 0.17
SEC13-201ENST00000337354 OBP2AQ9NY56 170 aa16.12■□□□□ 0.17
SEC13-201ENST00000337354 C2orf78A6NCI8 922 aa16.11■□□□□ 0.17
SEC13-201ENST00000337354 C19orf67A6NJJ6 358 aa16.11■□□□□ 0.17
SEC13-201ENST00000337354 LTFP02788 710 aa16.11■□□□□ 0.17
SEC13-201ENST00000337354 PLEKP08567 350 aaPredicted RBP16.11■□□□□ 0.17
SEC13-201ENST00000337354 EIF4A3P38919 411 aaKnown RBP16.11■□□□□ 0.17
SEC13-201ENST00000337354 PGFP49763 221 aa16.11■□□□□ 0.17
SEC13-201ENST00000337354 GSCP56915 257 aaPredicted RBP16.11■□□□□ 0.17
SEC13-201ENST00000337354 GSDMDP57764 484 aa16.11■□□□□ 0.17
SEC13-201ENST00000337354 SLC7A9P82251 487 aa16.11■□□□□ 0.17
SEC13-201ENST00000337354 GOLGA8FQ08AF8 430 aa16.11■□□□□ 0.17
SEC13-201ENST00000337354 GOLGA8DPQ0D2H9 430 aa16.11■□□□□ 0.17
SEC13-201ENST00000337354 SLC18A3Q16572 532 aa16.11■□□□□ 0.17
SEC13-201ENST00000337354 ASTE1Q2TB18 679 aaPredicted RBP16.11■□□□□ 0.17
SEC13-201ENST00000337354 FAM78AQ5JUQ0 283 aa16.11■□□□□ 0.17
SEC13-201ENST00000337354 POTEHQ6S545 545 aa16.11■□□□□ 0.17
SEC13-201ENST00000337354 OLFML1Q6UWY5 402 aa16.11■□□□□ 0.17
SEC13-201ENST00000337354 MMS22LQ6ZRQ5 1243 aa16.11■□□□□ 0.17
SEC13-201ENST00000337354 SLC26A9Q7LBE3 791 aa16.11■□□□□ 0.17
SEC13-201ENST00000337354 ARCQ7LC44 396 aa16.11■□□□□ 0.17
SEC13-201ENST00000337354 XYLT1Q86Y38 959 aa16.11■□□□□ 0.17
SEC13-201ENST00000337354 MCOLN2Q8IZK6 566 aa16.11■□□□□ 0.17
SEC13-201ENST00000337354 GJD3Q8N144 294 aa16.11■□□□□ 0.17
SEC13-201ENST00000337354 CELF5Q8N6W0 485 aaKnown RBP16.11■□□□□ 0.17
SEC13-201ENST00000337354 ARL14EPQ8N8R7 260 aaPredicted RBP16.11■□□□□ 0.17
SEC13-201ENST00000337354 SPC24Q8NBT2 197 aa16.11■□□□□ 0.17
SEC13-201ENST00000337354 NDRG1Q92597 394 aaKnown RBP16.11■□□□□ 0.17
SEC13-201ENST00000337354 CYP2S1Q96SQ9 504 aa16.11■□□□□ 0.17
SEC13-201ENST00000337354 CHP1Q99653 195 aa16.11■□□□□ 0.17
SEC13-201ENST00000337354 RNF38Q9H0F5 515 aa16.11■□□□□ 0.17
SEC13-201ENST00000337354 NHEJ1Q9H9Q4 299 aaPredicted RBP16.11■□□□□ 0.17
SEC13-201ENST00000337354 KIF9Q9HAQ2 790 aa16.11■□□□□ 0.17
SEC13-201ENST00000337354 POPDC2Q9HBU9 364 aa16.11■□□□□ 0.17
SEC13-201ENST00000337354 TDP1Q9NUW8 608 aa16.11■□□□□ 0.17
SEC13-201ENST00000337354 IGSF9Q9P2J2 1179 aa16.11■□□□□ 0.17
SEC13-201ENST00000337354 TJP2Q9UDY2 1190 aa16.11■□□□□ 0.17
SEC13-201ENST00000337354 NCOR1O75376 2440 aa16.1■□□□□ 0.17
SEC13-201ENST00000337354 A0A087X0T9 212 aa16.1■□□□□ 0.17
SEC13-201ENST00000337354 ANHXE9PGG2 379 aa16.1■□□□□ 0.17
SEC13-201ENST00000337354 CAPN9O14815 690 aa16.1■□□□□ 0.17
SEC13-201ENST00000337354 COCHO43405 550 aa16.1■□□□□ 0.17
SEC13-201ENST00000337354 HSF2BPO75031 334 aa16.1■□□□□ 0.17
SEC13-201ENST00000337354 ECI2O75521 394 aa16.1■□□□□ 0.17
SEC13-201ENST00000337354 FTLP02792 175 aaPredicted RBP16.1■□□□□ 0.17
SEC13-201ENST00000337354 CKMP06732 381 aa16.1■□□□□ 0.17
SEC13-201ENST00000337354 FAM228BP0C875 321 aa16.1■□□□□ 0.17
SEC13-201ENST00000337354 PTP4A2Q12974 167 aa16.1■□□□□ 0.17
SEC13-201ENST00000337354 ALKBH5Q6P6C2 394 aaKnown RBP16.1■□□□□ 0.17
SEC13-201ENST00000337354 FAM183BPQ6ZVS7 135 aa16.1■□□□□ 0.17
SEC13-201ENST00000337354 MON1BQ7L1V2 547 aa16.1■□□□□ 0.17
SEC13-201ENST00000337354 RSRC2Q7L4I2 434 aaKnown RBP16.1■□□□□ 0.17
SEC13-201ENST00000337354 TMTC1Q8IUR5 882 aa16.1■□□□□ 0.17
SEC13-201ENST00000337354 CCDC170Q8IYT3 715 aa16.1■□□□□ 0.17
SEC13-201ENST00000337354 KIAA1958Q8N8K9 716 aa16.1■□□□□ 0.17
SEC13-201ENST00000337354 CLEC4CQ8WTT0 213 aa16.1■□□□□ 0.17
SEC13-201ENST00000337354 ELSPBP1Q96BH3 223 aa16.1■□□□□ 0.17
SEC13-201ENST00000337354 FAM149B1Q96BN6 582 aa16.1■□□□□ 0.17
SEC13-201ENST00000337354 TRIM11Q96F44 468 aa16.1■□□□□ 0.17
SEC13-201ENST00000337354 C11orf70Q9BRQ4 267 aa16.1■□□□□ 0.17
SEC13-201ENST00000337354 CCSER2Q9H7U1 834 aa16.1■□□□□ 0.17
SEC13-201ENST00000337354 TMEM51Q9NW97 253 aa16.1■□□□□ 0.17
SEC13-201ENST00000337354 DNMT3LQ9UJW3 386 aa16.1■□□□□ 0.17
SEC13-201ENST00000337354 ARHGAP26Q9UNA1 814 aa16.1■□□□□ 0.17
SEC13-201ENST00000337354 VCANP13611 3396 aa16.09■□□□□ 0.17
SEC13-201ENST00000337354 DPYSL4O14531 572 aa16.09■□□□□ 0.17
SEC13-201ENST00000337354 AKR1B10O60218 316 aa16.09■□□□□ 0.17
SEC13-201ENST00000337354 MYBL1P10243 752 aa16.09■□□□□ 0.17
SEC13-201ENST00000337354 TCF3P15923 654 aa16.09■□□□□ 0.17
SEC13-201ENST00000337354 FECHP22830 423 aa16.09■□□□□ 0.17
SEC13-201ENST00000337354 COG7P83436 770 aa16.09■□□□□ 0.17
SEC13-201ENST00000337354 C10orf120Q5SQS8 335 aa16.09■□□□□ 0.17
SEC13-201ENST00000337354 HFE2Q6ZVN8 426 aa16.09■□□□□ 0.17
SEC13-201ENST00000337354 DDX42Q86XP3 938 aaKnown RBP eCLIP16.09■□□□□ 0.17
SEC13-201ENST00000337354 SLC22A12Q96S37 553 aa16.09■□□□□ 0.17
SEC13-201ENST00000337354 CD320Q9NPF0 282 aa16.09■□□□□ 0.17
SEC13-201ENST00000337354 TAS2R14Q9NYV8 317 aa16.09■□□□□ 0.17
SEC13-201ENST00000337354 LIMD1Q9UGP4 676 aa16.09■□□□□ 0.17
SEC13-201ENST00000337354 C5orf42Q9H799 3197 aa16.08■□□□□ 0.17
SEC13-201ENST00000337354 TMCO5BA8MYB1 307 aa16.08■□□□□ 0.16
SEC13-201ENST00000337354 TBX18O95935 607 aa16.08■□□□□ 0.16
SEC13-201ENST00000337354 FYNP06241 537 aa16.08■□□□□ 0.16
SEC13-201ENST00000337354 MBL2P11226 248 aaPredicted RBP16.08■□□□□ 0.16
SEC13-201ENST00000337354 NCAM1P13591 858 aa16.08■□□□□ 0.16
SEC13-201ENST00000337354 NOS2P35228 1153 aa16.08■□□□□ 0.16
SEC13-201ENST00000337354 KPNA1P52294 538 aaPredicted RBP16.08■□□□□ 0.16
SEC13-201ENST00000337354 CCDC122Q5T0U0 273 aa16.08■□□□□ 0.16
SEC13-201ENST00000337354 FAM102AQ5T9C2 384 aaPredicted RBP16.08■□□□□ 0.16
SEC13-201ENST00000337354 PARM1Q6UWI2 310 aa16.08■□□□□ 0.16
SEC13-201ENST00000337354 C3orf20Q8ND61 904 aa16.08■□□□□ 0.16
SEC13-201ENST00000337354 EDEM1Q92611 657 aa16.08■□□□□ 0.16
SEC13-201ENST00000337354 KHSRPQ92945 711 aaKnown RBP eCLIP16.08■□□□□ 0.16
SEC13-201ENST00000337354 USP13Q92995 863 aaPredicted RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms