RNA–Protein interactions for RNA: ENST00000336714.7

SEC23B-202, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23B, Length 3,411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-202ENST00000336714 CCDC33Q8N5R6 958 aa11.47□□□□□ -0.57
SEC23B-202ENST00000336714 TFB1MQ8WVM0 346 aaKnown RBP11.47□□□□□ -0.57
SEC23B-202ENST00000336714 PPWD1Q96BP3 646 aaKnown RBP11.47□□□□□ -0.57
SEC23B-202ENST00000336714 TRIM11Q96F44 468 aa11.47□□□□□ -0.57
SEC23B-202ENST00000336714 SETDB2Q96T68 719 aa11.47□□□□□ -0.57
SEC23B-202ENST00000336714 KIFC3Q9BVG8 833 aa11.47□□□□□ -0.57
SEC23B-202ENST00000336714 NAA50Q9GZZ1 169 aaKnown RBP11.47□□□□□ -0.57
SEC23B-202ENST00000336714 SLC17A6Q9P2U8 582 aa11.47□□□□□ -0.57
SEC23B-202ENST00000336714 FZD1Q9UP38 647 aa11.47□□□□□ -0.57
SEC23B-202ENST00000336714 SCINQ9Y6U3 715 aa11.47□□□□□ -0.57
SEC23B-202ENST00000336714 CNTNAP2Q9UHC6 1331 aa11.47□□□□□ -0.57
SEC23B-202ENST00000336714 CASQ2O14958 399 aaPredicted RBP11.47□□□□□ -0.57
SEC23B-202ENST00000336714 ZBTB7AO95365 584 aa11.47□□□□□ -0.57
SEC23B-202ENST00000336714 FGD3Q5JSP0 725 aa11.47□□□□□ -0.57
SEC23B-202ENST00000336714 HYIQ5T013 277 aa11.47□□□□□ -0.57
SEC23B-202ENST00000336714 NANOGP8Q6NSW7 305 aa11.47□□□□□ -0.57
SEC23B-202ENST00000336714 TATDN1Q6P1N9 297 aa11.47□□□□□ -0.57
SEC23B-202ENST00000336714 PRR23BQ6ZRT6 265 aa11.47□□□□□ -0.57
SEC23B-202ENST00000336714 DDI1Q8WTU0 396 aa11.47□□□□□ -0.57
SEC23B-202ENST00000336714 CPT1BQ92523 772 aa11.47□□□□□ -0.57
SEC23B-202ENST00000336714 TRPV6Q9H1D0 765 aa11.47□□□□□ -0.57
SEC23B-202ENST00000336714 ZFYVE28Q9HCC9 887 aa11.47□□□□□ -0.57
SEC23B-202ENST00000336714 TMED5Q9Y3A6 229 aa11.47□□□□□ -0.57
SEC23B-202ENST00000336714 PLOD2O00469 737 aa11.46□□□□□ -0.57
SEC23B-202ENST00000336714 CLIC3O95833 236 aa11.46□□□□□ -0.57
SEC23B-202ENST00000336714 AMHP03971 560 aa11.46□□□□□ -0.57
SEC23B-202ENST00000336714 CCDC130P13994 396 aa11.46□□□□□ -0.57
SEC23B-202ENST00000336714 SOX11P35716 441 aa11.46□□□□□ -0.57
SEC23B-202ENST00000336714 TUFMP49411 452 aaKnown RBP11.46□□□□□ -0.57
SEC23B-202ENST00000336714 THOP1P52888 689 aa11.46□□□□□ -0.57
SEC23B-202ENST00000336714 TRAF2Q12933 501 aa11.46□□□□□ -0.57
SEC23B-202ENST00000336714 SHROOM1Q2M3G4 852 aaPredicted RBP11.46□□□□□ -0.57
SEC23B-202ENST00000336714 SPOPLQ6IQ16 392 aa11.46□□□□□ -0.57
SEC23B-202ENST00000336714 RNF19BQ6ZMZ0 732 aa11.46□□□□□ -0.57
SEC23B-202ENST00000336714 FBXW8Q8N3Y1 598 aa11.46□□□□□ -0.57
SEC23B-202ENST00000336714 ALLCQ8N6M5 410 aa11.46□□□□□ -0.57
SEC23B-202ENST00000336714 NAT16Q8N8M0 369 aa11.46□□□□□ -0.57
SEC23B-202ENST00000336714 ACTL9Q8TC94 416 aa11.46□□□□□ -0.57
SEC23B-202ENST00000336714 MZB1Q8WU39 189 aa11.46□□□□□ -0.57
SEC23B-202ENST00000336714 ALKBH8Q96BT7 664 aaKnown RBP11.46□□□□□ -0.57
SEC23B-202ENST00000336714 PPP1R14BQ96C90 147 aa11.46□□□□□ -0.57
SEC23B-202ENST00000336714 TMA16Q96EY4 203 aaKnown RBP11.46□□□□□ -0.57
SEC23B-202ENST00000336714 RNPEPQ9H4A4 650 aa11.46□□□□□ -0.57
SEC23B-202ENST00000336714 ZNF287Q9HBT7 754 aa11.46□□□□□ -0.57
SEC23B-202ENST00000336714 PCDH12Q9NPG4 1184 aa11.46□□□□□ -0.57
SEC23B-202ENST00000336714 PIH1D1Q9NWS0 290 aaKnown RBP11.46□□□□□ -0.57
SEC23B-202ENST00000336714 BTBD19C9JJ37 291 aa11.46□□□□□ -0.58
SEC23B-202ENST00000336714 CYP3A4P08684 503 aa11.46□□□□□ -0.58
SEC23B-202ENST00000336714 QRICH1Q2TAL8 776 aa11.46□□□□□ -0.58
SEC23B-202ENST00000336714 ZNF394Q53GI3 561 aa11.46□□□□□ -0.58
SEC23B-202ENST00000336714 OGFRL1Q5TC84 451 aaPredicted RBP11.46□□□□□ -0.58
SEC23B-202ENST00000336714 KCNT2Q6UVM3 1135 aa11.46□□□□□ -0.58
SEC23B-202ENST00000336714 GPR141Q7Z602 305 aa11.46□□□□□ -0.58
SEC23B-202ENST00000336714 AHI1Q8N157 1196 aa11.46□□□□□ -0.58
SEC23B-202ENST00000336714 NEDD1Q8NHV4 660 aa11.46□□□□□ -0.58
SEC23B-202ENST00000336714 ATXN7L3BQ96GX2 97 aa11.46□□□□□ -0.58
SEC23B-202ENST00000336714 VPS50Q96JG6 964 aa11.46□□□□□ -0.58
SEC23B-202ENST00000336714 SNX27Q96L92 541 aa11.46□□□□□ -0.58
SEC23B-202ENST00000336714 TBCCD1Q9NVR7 557 aa11.46□□□□□ -0.58
SEC23B-202ENST00000336714 PSMD13Q9UNM6 376 aa11.46□□□□□ -0.58
SEC23B-202ENST00000336714 MSH4O15457 936 aa11.45□□□□□ -0.58
SEC23B-202ENST00000336714 PROSCO94903 275 aa11.45□□□□□ -0.58
SEC23B-202ENST00000336714 KCNH1O95259 989 aa11.45□□□□□ -0.58
SEC23B-202ENST00000336714 ATE1O95260 518 aa11.45□□□□□ -0.58
SEC23B-202ENST00000336714 ORC2Q13416 577 aaPredicted RBP11.45□□□□□ -0.58
SEC23B-202ENST00000336714 NEDD8Q15843 81 aa11.45□□□□□ -0.58
SEC23B-202ENST00000336714 TRIM16LQ309B1 348 aa11.45□□□□□ -0.58
SEC23B-202ENST00000336714 SLC9A4Q6AI14 798 aa11.45□□□□□ -0.58
SEC23B-202ENST00000336714 DCUN1D2Q6PH85 259 aa11.45□□□□□ -0.58
SEC23B-202ENST00000336714 SLFN12Q8IYM2 578 aa11.45□□□□□ -0.58
SEC23B-202ENST00000336714 ATP6V0A1Q93050 837 aa11.45□□□□□ -0.58
SEC23B-202ENST00000336714 GFM2Q969S9 779 aaKnown RBP11.45□□□□□ -0.58
SEC23B-202ENST00000336714 CIB1Q99828 191 aa11.45□□□□□ -0.58
SEC23B-202ENST00000336714 HAUS8Q9BT25 410 aa11.45□□□□□ -0.58
SEC23B-202ENST00000336714 HERC2P3Q9BVR0 1158 aa11.45□□□□□ -0.58
SEC23B-202ENST00000336714 TPK1Q9H3S4 243 aa11.45□□□□□ -0.58
SEC23B-202ENST00000336714 C17orf75Q9HAS0 396 aa11.45□□□□□ -0.58
SEC23B-202ENST00000336714 KIF1AQ12756 1690 aa11.45□□□□□ -0.58
SEC23B-202ENST00000336714 ATRNL1Q5VV63 1379 aa11.45□□□□□ -0.58
SEC23B-202ENST00000336714 CCNT2O60583 730 aaKnown RBP11.45□□□□□ -0.58
SEC23B-202ENST00000336714 ADRB2P07550 413 aa11.45□□□□□ -0.58
SEC23B-202ENST00000336714 CDK9P50750 372 aaKnown RBP11.45□□□□□ -0.58
SEC23B-202ENST00000336714 SPIRE1Q08AE8 756 aa11.45□□□□□ -0.58
SEC23B-202ENST00000336714 CLEC16AQ2KHT3 1053 aa11.45□□□□□ -0.58
SEC23B-202ENST00000336714 CROCCP3Q8IVE0 287 aa11.45□□□□□ -0.58
SEC23B-202ENST00000336714 HACE1Q8IYU2 909 aa11.45□□□□□ -0.58
SEC23B-202ENST00000336714 FAM47BQ8NA70 645 aa11.45□□□□□ -0.58
SEC23B-202ENST00000336714 JADE3Q92613 823 aa11.45□□□□□ -0.58
SEC23B-202ENST00000336714 CEP44Q9C0F1 390 aa11.45□□□□□ -0.58
SEC23B-202ENST00000336714 PCSK1NQ9UHG2 260 aa11.45□□□□□ -0.58
SEC23B-202ENST00000336714 SNX13Q9Y5W8 968 aa11.45□□□□□ -0.58
SEC23B-202ENST00000336714 ST14Q9Y5Y6 855 aa11.45□□□□□ -0.58
SEC23B-202ENST00000336714 SDR42E2A6NKP2 422 aa11.45□□□□□ -0.58
SEC23B-202ENST00000336714 TPST1O60507 370 aa11.45□□□□□ -0.58
SEC23B-202ENST00000336714 DSG3P32926 999 aa11.45□□□□□ -0.58
SEC23B-202ENST00000336714 RPL22P35268 128 aaKnown RBP11.45□□□□□ -0.58
SEC23B-202ENST00000336714 NUP107P57740 925 aa11.45□□□□□ -0.58
SEC23B-202ENST00000336714 ESRRGP62508 458 aa11.45□□□□□ -0.58
SEC23B-202ENST00000336714 MRPS5P82675 430 aaKnown RBP11.45□□□□□ -0.58
SEC23B-202ENST00000336714 CTBSQ01459 385 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms