RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 ETNK2Q9NVF9 386 aa24.31■■□□□ 1.48
NDEL1-201ENST00000334527 ZC3H7BQ9UGR2 993 aaKnown RBP24.31■■□□□ 1.48
NDEL1-201ENST00000334527 DIAPH2O60879 1101 aa24.3■■□□□ 1.48
NDEL1-201ENST00000334527 APRTP07741 180 aa24.3■■□□□ 1.48
NDEL1-201ENST00000334527 SLC6A3Q01959 620 aa24.3■■□□□ 1.48
NDEL1-201ENST00000334527 TTLL12Q14166 644 aaPredicted RBP24.3■■□□□ 1.48
NDEL1-201ENST00000334527 MTHFD1LQ6UB35 978 aa24.3■■□□□ 1.48
NDEL1-201ENST00000334527 POPDC2Q9HBU9 364 aa24.3■■□□□ 1.48
NDEL1-201ENST00000334527 BCLAF3A2AJT9 711 aaKnown RBP24.3■■□□□ 1.48
NDEL1-201ENST00000334527 EPHB2P29323 1055 aa24.3■■□□□ 1.48
NDEL1-201ENST00000334527 PPP6R3Q5H9R7 873 aaPredicted RBP24.3■■□□□ 1.48
NDEL1-201ENST00000334527 TTC39BQ5VTQ0 682 aaPredicted RBP24.3■■□□□ 1.48
NDEL1-201ENST00000334527 CAND1Q86VP6 1230 aaKnown RBP24.3■■□□□ 1.48
NDEL1-201ENST00000334527 FAM13CQ8NE31 585 aa24.3■■□□□ 1.48
NDEL1-201ENST00000334527 AFG1LQ8WV93 481 aa24.3■■□□□ 1.48
NDEL1-201ENST00000334527 KHSRPQ92945 711 aaKnown RBP eCLIP24.3■■□□□ 1.483e-6■■■□□ 18.3
NDEL1-201ENST00000334527 SNX9Q9Y5X1 595 aa24.3■■□□□ 1.48
NDEL1-201ENST00000334527 C1QAP02745 245 aa24.29■■□□□ 1.48
NDEL1-201ENST00000334527 BGNP21810 368 aa24.29■■□□□ 1.48
NDEL1-201ENST00000334527 CTC1Q2NKJ3 1217 aa24.29■■□□□ 1.48
NDEL1-201ENST00000334527 PKDCCQ504Y2 493 aa24.29■■□□□ 1.48
NDEL1-201ENST00000334527 NT5DC4Q86YG4 428 aa24.29■■□□□ 1.48
NDEL1-201ENST00000334527 CCDC110Q8TBZ0 833 aa24.29■■□□□ 1.48
NDEL1-201ENST00000334527 USP6NLQ92738 828 aa24.29■■□□□ 1.48
NDEL1-201ENST00000334527 TBCBQ99426 244 aa24.29■■□□□ 1.48
NDEL1-201ENST00000334527 SGIP1Q9BQI5 828 aa24.29■■□□□ 1.48
NDEL1-201ENST00000334527 SLC4A5Q9BY07 1137 aa24.29■■□□□ 1.48
NDEL1-201ENST00000334527 CXCL16Q9H2A7 254 aa24.29■■□□□ 1.48
NDEL1-201ENST00000334527 SAR1AQ9NR31 198 aa24.29■■□□□ 1.48
NDEL1-201ENST00000334527 PLXNA1Q9UIW2 1896 aa24.29■■□□□ 1.48
NDEL1-201ENST00000334527 LOC102724159A0A0B4J2E5 919 aa24.29■■□□□ 1.48
NDEL1-201ENST00000334527 TRIM49D1C9J1S8 452 aa24.29■■□□□ 1.48
NDEL1-201ENST00000334527 TRAFD1O14545 582 aaPredicted RBP24.29■■□□□ 1.48
NDEL1-201ENST00000334527 DESP17661 470 aa24.29■■□□□ 1.48
NDEL1-201ENST00000334527 CBLBQ13191 982 aa24.29■■□□□ 1.48
NDEL1-201ENST00000334527 PPIL2Q13356 520 aa24.29■■□□□ 1.48
NDEL1-201ENST00000334527 PWP2Q15269 919 aaKnown RBP24.29■■□□□ 1.48
NDEL1-201ENST00000334527 TAPT1Q6NXT6 567 aa24.29■■□□□ 1.48
NDEL1-201ENST00000334527 HEY2Q9UBP5 337 aa24.29■■□□□ 1.48
NDEL1-201ENST00000334527 CXorf49A8MYA2 514 aaPredicted RBP24.28■■□□□ 1.48
NDEL1-201ENST00000334527 PRKD1Q15139 912 aaPredicted RBP24.28■■□□□ 1.48
NDEL1-201ENST00000334527 TMEM110Q86TL2 294 aa24.28■■□□□ 1.48
NDEL1-201ENST00000334527 SESTD1Q86VW0 696 aa24.28■■□□□ 1.48
NDEL1-201ENST00000334527 PPTC7Q8NI37 304 aa24.28■■□□□ 1.48
NDEL1-201ENST00000334527 OPTNQ96CV9 577 aa24.28■■□□□ 1.48
NDEL1-201ENST00000334527 ZNF670Q9BS34 389 aa24.28■■□□□ 1.48
NDEL1-201ENST00000334527 B3GNT5Q9BYG0 378 aa24.28■■□□□ 1.48
NDEL1-201ENST00000334527 IQCGQ9H095 443 aaKnown RBP24.28■■□□□ 1.48
NDEL1-201ENST00000334527 DICER1Q9UPY3 1922 aaKnown RBP24.28■■□□□ 1.48
NDEL1-201ENST00000334527 COPEO14579 308 aa24.28■■□□□ 1.48
NDEL1-201ENST00000334527 PPEF2O14830 753 aa24.28■■□□□ 1.48
NDEL1-201ENST00000334527 MDM4O15151 490 aa24.28■■□□□ 1.48
NDEL1-201ENST00000334527 PAPSS1O43252 624 aaPredicted RBP24.28■■□□□ 1.48
NDEL1-201ENST00000334527 PTPN4P29074 926 aa24.28■■□□□ 1.48
NDEL1-201ENST00000334527 GRM5P41594 1212 aa24.28■■□□□ 1.48
NDEL1-201ENST00000334527 ARFIP2P53365 341 aa24.28■■□□□ 1.48
NDEL1-201ENST00000334527 HDAC4P56524 1084 aa24.28■■□□□ 1.48
NDEL1-201ENST00000334527 SLC35F5Q8WV83 523 aa24.28■■□□□ 1.48
NDEL1-201ENST00000334527 SRPK1Q96SB4 655 aaKnown RBP24.28■■□□□ 1.48
NDEL1-201ENST00000334527 HESX1Q9UBX0 185 aa24.28■■□□□ 1.48
NDEL1-201ENST00000334527 LNPEPQ9UIQ6 1025 aa24.28■■□□□ 1.48
NDEL1-201ENST00000334527 COL1A2P08123 1366 aa24.27■■□□□ 1.48
NDEL1-201ENST00000334527 KRT37O76014 449 aa24.27■■□□□ 1.48
NDEL1-201ENST00000334527 TFE3P19532 575 aaPredicted RBP24.27■■□□□ 1.48
NDEL1-201ENST00000334527 FASTKD5Q7L8L6 764 aaKnown RBP24.27■■□□□ 1.48
NDEL1-201ENST00000334527 PLAC1Q9HBJ0 212 aa24.27■■□□□ 1.48
NDEL1-201ENST00000334527 NME7Q9Y5B8 376 aa24.27■■□□□ 1.48
NDEL1-201ENST00000334527 SCN1AP35498 2009 aa24.27■■□□□ 1.48
NDEL1-201ENST00000334527 GABBR2O75899 941 aa24.27■■□□□ 1.48
NDEL1-201ENST00000334527 SNRPAP09012 282 aaKnown RBP24.27■■□□□ 1.48
NDEL1-201ENST00000334527 MAGEA6P43360 314 aa24.27■■□□□ 1.48
NDEL1-201ENST00000334527 SERPINB4P48594 390 aa24.27■■□□□ 1.48
NDEL1-201ENST00000334527 CLNS1AP54105 237 aaKnown RBP24.27■■□□□ 1.48
NDEL1-201ENST00000334527 MAMDC4Q6UXC1 1216 aa24.27■■□□□ 1.48
NDEL1-201ENST00000334527 CDHR3Q6ZTQ4 885 aa24.27■■□□□ 1.48
NDEL1-201ENST00000334527 C16orf70Q9BSU1 422 aa24.27■■□□□ 1.48
NDEL1-201ENST00000334527 TMEM120AQ9BXJ8 343 aa24.27■■□□□ 1.48
NDEL1-201ENST00000334527 NRDE2Q9H7Z3 1164 aa24.27■■□□□ 1.48
NDEL1-201ENST00000334527 CNTN3Q9P232 1028 aa24.27■■□□□ 1.48
NDEL1-201ENST00000334527 NKX1-2Q9UD57 310 aaPredicted RBP24.27■■□□□ 1.48
NDEL1-201ENST00000334527 HAUS5O94927 633 aa24.26■■□□□ 1.47
NDEL1-201ENST00000334527 SETSIPP0DME0 302 aa24.26■■□□□ 1.47
NDEL1-201ENST00000334527 PRKCHP24723 683 aa24.26■■□□□ 1.47
NDEL1-201ENST00000334527 CYP2F1P24903 491 aa24.26■■□□□ 1.47
NDEL1-201ENST00000334527 KCNK13Q9HB14 408 aa24.26■■□□□ 1.47
NDEL1-201ENST00000334527 ZNF180Q9UJW8 692 aa24.26■■□□□ 1.47
NDEL1-201ENST00000334527 TRIP11Q15643 1979 aa24.26■■□□□ 1.47
NDEL1-201ENST00000334527 SLC15A5A6NIM6 579 aa24.25■■□□□ 1.47
NDEL1-201ENST00000334527 TRDMT1O14717 391 aaKnown RBP24.25■■□□□ 1.47
NDEL1-201ENST00000334527 HNRNPCL1O60812 293 aaKnown RBP24.25■■□□□ 1.47
NDEL1-201ENST00000334527 TGDSO95455 350 aa24.25■■□□□ 1.47
NDEL1-201ENST00000334527 NPTXRO95502 500 aa24.25■■□□□ 1.47
NDEL1-201ENST00000334527 CDKL3Q8IVW4 592 aaPredicted RBP24.25■■□□□ 1.47
NDEL1-201ENST00000334527 ZMAT2Q96NC0 199 aaKnown RBP24.25■■□□□ 1.47
NDEL1-201ENST00000334527 LPIN3Q9BQK8 851 aa24.25■■□□□ 1.47
NDEL1-201ENST00000334527 RNPEPL1Q9HAU8 725 aa24.25■■□□□ 1.47
NDEL1-201ENST00000334527 SMYD2Q9NRG4 433 aa24.25■■□□□ 1.47
NDEL1-201ENST00000334527 MTO1Q9Y2Z2 717 aaKnown RBP24.25■■□□□ 1.47
NDEL1-201ENST00000334527 KAT6AQ92794 2004 aa24.25■■□□□ 1.47
NDEL1-201ENST00000334527 H3BRB1 525 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms