RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 RNF145Q96MT1 663 aa10.1□□□□□ -0.79
COL4A6-201ENST00000334504 SEMA4AQ9H3S1 761 aa10.1□□□□□ -0.79
COL4A6-201ENST00000334504 CORO1CQ9ULV4 474 aaPredicted RBP10.1□□□□□ -0.79
COL4A6-201ENST00000334504 HLA-DRAP01903 254 aa10.09□□□□□ -0.79
COL4A6-201ENST00000334504 TSPAN19P0C672 248 aa10.09□□□□□ -0.79
COL4A6-201ENST00000334504 FAM153BP0C7A2 387 aa10.09□□□□□ -0.79
COL4A6-201ENST00000334504 CPB1P15086 417 aa10.09□□□□□ -0.79
COL4A6-201ENST00000334504 MAPK1P28482 360 aa10.09□□□□□ -0.79
COL4A6-201ENST00000334504 IL6STP40189 918 aaPredicted RBP10.09□□□□□ -0.79
COL4A6-201ENST00000334504 PTDSS1P48651 473 aaKnown RBP10.09□□□□□ -0.79
COL4A6-201ENST00000334504 CASP5P51878 434 aa10.09□□□□□ -0.79
COL4A6-201ENST00000334504 HIST2H2ACQ16777 129 aaPredicted RBP10.09□□□□□ -0.79
COL4A6-201ENST00000334504 GOLGA7BQ2TAP0 167 aa10.09□□□□□ -0.79
COL4A6-201ENST00000334504 FAM153CQ494X1 144 aa10.09□□□□□ -0.79
COL4A6-201ENST00000334504 HIST2H2AA3Q6FI13 130 aa10.09□□□□□ -0.79
COL4A6-201ENST00000334504 KIAA0408Q6ZU52 694 aa10.09□□□□□ -0.79
COL4A6-201ENST00000334504 STRA8Q7Z7C7 330 aa10.09□□□□□ -0.79
COL4A6-201ENST00000334504 SLC26A11Q86WA9 606 aa10.09□□□□□ -0.79
COL4A6-201ENST00000334504 BHLHE22Q8NFJ8 381 aaPredicted RBP10.09□□□□□ -0.79
COL4A6-201ENST00000334504 UBE2OQ9C0C9 1292 aaKnown RBP10.09□□□□□ -0.79
COL4A6-201ENST00000334504 RBMX2Q9Y388 322 aaKnown RBP10.09□□□□□ -0.79
COL4A6-201ENST00000334504 SNX9Q9Y5X1 595 aa10.09□□□□□ -0.79
COL4A6-201ENST00000334504 LOC100506127A0A0U1RQW1 187 aa10.09□□□□□ -0.79
COL4A6-201ENST00000334504 MT-CO1P00395 513 aa10.09□□□□□ -0.79
COL4A6-201ENST00000334504 PDGFRBP09619 1106 aa10.09□□□□□ -0.79
COL4A6-201ENST00000334504 AKAP5P24588 427 aa10.09□□□□□ -0.79
COL4A6-201ENST00000334504 CDK16Q00536 496 aa10.09□□□□□ -0.79
COL4A6-201ENST00000334504 ZNF844Q08AG5 666 aa10.09□□□□□ -0.79
COL4A6-201ENST00000334504 EDRF1Q3B7T1 1238 aa10.09□□□□□ -0.79
COL4A6-201ENST00000334504 NSUN6Q8TEA1 469 aaKnown RBP10.09□□□□□ -0.79
COL4A6-201ENST00000334504 MRPL48Q96GC5 212 aaKnown RBP10.09□□□□□ -0.79
COL4A6-201ENST00000334504 CDRT15Q96T59 188 aa10.09□□□□□ -0.79
COL4A6-201ENST00000334504 ZNF180Q9UJW8 692 aa10.09□□□□□ -0.79
COL4A6-201ENST00000334504 SHANK2Q9UPX8 1470 aa10.09□□□□□ -0.79
COL4A6-201ENST00000334504 MYL12BO14950 172 aa10.09□□□□□ -0.79
COL4A6-201ENST00000334504 IFI35P80217 286 aaPredicted RBP10.09□□□□□ -0.79
COL4A6-201ENST00000334504 SWT1Q5T5J6 900 aaKnown RBP10.09□□□□□ -0.79
COL4A6-201ENST00000334504 NECAB2Q7Z6G3 386 aa10.09□□□□□ -0.79
COL4A6-201ENST00000334504 ZNF677Q86XU0 584 aa10.09□□□□□ -0.79
COL4A6-201ENST00000334504 CCDC33Q8N5R6 958 aa10.09□□□□□ -0.79
COL4A6-201ENST00000334504 C17orf50Q8WW18 174 aa10.09□□□□□ -0.79
COL4A6-201ENST00000334504 PIGUQ9H490 435 aa10.09□□□□□ -0.79
COL4A6-201ENST00000334504 DCP1AQ9NPI6 582 aaPredicted RBP10.09□□□□□ -0.79
COL4A6-201ENST00000334504 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.09□□□□□ -0.79
COL4A6-201ENST00000334504 A0A087X0T9 212 aa10.09□□□□□ -0.79
COL4A6-201ENST00000334504 TIMM44O43615 452 aa10.09□□□□□ -0.79
COL4A6-201ENST00000334504 SEC24AO95486 1093 aa10.09□□□□□ -0.79
COL4A6-201ENST00000334504 FAM228BP0C875 321 aa10.09□□□□□ -0.79
COL4A6-201ENST00000334504 MRPS22P82650 360 aaKnown RBP10.09□□□□□ -0.79
COL4A6-201ENST00000334504 STX4Q12846 297 aa10.09□□□□□ -0.79
COL4A6-201ENST00000334504 QPRTQ15274 297 aa10.09□□□□□ -0.79
COL4A6-201ENST00000334504 KYAT1Q16773 422 aa10.09□□□□□ -0.79
COL4A6-201ENST00000334504 SNRNP48Q6IEG0 339 aaKnown RBP10.09□□□□□ -0.79
COL4A6-201ENST00000334504 UGT3A1Q6NUS8 523 aa10.09□□□□□ -0.79
COL4A6-201ENST00000334504 LLGL2Q6P1M3 1020 aa10.09□□□□□ -0.79
COL4A6-201ENST00000334504 KLHL24Q6TFL4 600 aa10.09□□□□□ -0.79
COL4A6-201ENST00000334504 CASP12Q6UXS9 341 aa10.09□□□□□ -0.79
COL4A6-201ENST00000334504 ANKARQ7Z5J8 1434 aa10.09□□□□□ -0.79
COL4A6-201ENST00000334504 DDX50Q9BQ39 737 aaKnown RBP10.09□□□□□ -0.79
COL4A6-201ENST00000334504 PRRG3Q9BZD7 231 aa10.09□□□□□ -0.79
COL4A6-201ENST00000334504 MUC3BQ9H195 1237 aa10.09□□□□□ -0.79
COL4A6-201ENST00000334504 SDR42E2A6NKP2 422 aa10.09□□□□□ -0.79
COL4A6-201ENST00000334504 KIAA0391O15091 583 aaKnown RBP10.09□□□□□ -0.79
COL4A6-201ENST00000334504 CBFA2T3O75081 653 aa10.09□□□□□ -0.79
COL4A6-201ENST00000334504 ME2P23368 584 aa10.09□□□□□ -0.79
COL4A6-201ENST00000334504 STIP1P31948 543 aaKnown RBP10.09□□□□□ -0.79
COL4A6-201ENST00000334504 ALX1Q15699 326 aa10.09□□□□□ -0.79
COL4A6-201ENST00000334504 TSGA10IPQ3SY00 556 aa10.09□□□□□ -0.79
COL4A6-201ENST00000334504 GPR63Q9BZJ6 419 aa10.09□□□□□ -0.79
COL4A6-201ENST00000334504 EPB41L1Q9H4G0 881 aa10.09□□□□□ -0.79
COL4A6-201ENST00000334504 CATSPERBQ9H7T0 1116 aa10.09□□□□□ -0.79
COL4A6-201ENST00000334504 TMEM8AQ9HCN3 771 aa10.09□□□□□ -0.79
COL4A6-201ENST00000334504 SAR1AQ9NR31 198 aa10.09□□□□□ -0.79
COL4A6-201ENST00000334504 UBA2Q9UBT2 640 aaPredicted RBP10.09□□□□□ -0.79
COL4A6-201ENST00000334504 CNOT7Q9UIV1 285 aaKnown RBP10.09□□□□□ -0.79
COL4A6-201ENST00000334504 CPDO75976 1380 aa10.09□□□□□ -0.79
COL4A6-201ENST00000334504 ERBB3P21860 1342 aa10.09□□□□□ -0.79
COL4A6-201ENST00000334504 GSG1L2A8MUP6 293 aa10.08□□□□□ -0.8
COL4A6-201ENST00000334504 TRAPPC3O43617 180 aa10.08□□□□□ -0.8
COL4A6-201ENST00000334504 SGPL1O95470 568 aa10.08□□□□□ -0.8
COL4A6-201ENST00000334504 CNTFP26441 200 aa10.08□□□□□ -0.8
COL4A6-201ENST00000334504 FASTKQ14296 549 aaKnown RBP10.08□□□□□ -0.8
COL4A6-201ENST00000334504 CDC73Q6P1J9 531 aa10.08□□□□□ -0.8
COL4A6-201ENST00000334504 EXOC3L1Q86VI1 746 aa10.08□□□□□ -0.8
COL4A6-201ENST00000334504 RNF149Q8NC42 400 aa10.08□□□□□ -0.8
COL4A6-201ENST00000334504 OR7A2PQ8NGA2 310 aa10.08□□□□□ -0.8
COL4A6-201ENST00000334504 TCP10LQ8TDR4 215 aa10.08□□□□□ -0.8
COL4A6-201ENST00000334504 SRPK1Q96SB4 655 aaKnown RBP10.08□□□□□ -0.8
COL4A6-201ENST00000334504 SH2D3AQ9BRG2 576 aa10.08□□□□□ -0.8
COL4A6-201ENST00000334504 DNMT1P26358 1616 aaKnown RBP10.08□□□□□ -0.8
COL4A6-201ENST00000334504 FAM220BPB1ANY3 271 aa10.08□□□□□ -0.8
COL4A6-201ENST00000334504 PIK3CDO00329 1044 aa10.08□□□□□ -0.8
COL4A6-201ENST00000334504 MAP3K6O95382 1288 aa10.08□□□□□ -0.8
COL4A6-201ENST00000334504 IFNA14P01570 189 aa10.08□□□□□ -0.8
COL4A6-201ENST00000334504 TWF1Q12792 350 aa10.08□□□□□ -0.8
COL4A6-201ENST00000334504 ZNF605Q86T29 641 aa10.08□□□□□ -0.8
COL4A6-201ENST00000334504 DDX53Q86TM3 631 aaKnown RBP10.08□□□□□ -0.8
COL4A6-201ENST00000334504 AKAP14Q86UN6 197 aa10.08□□□□□ -0.8
COL4A6-201ENST00000334504 ERO1BQ86YB8 467 aa10.08□□□□□ -0.8
COL4A6-201ENST00000334504 DPF3Q92784 378 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms