RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 MARCOQ9UEW3 520 aaPredicted RBP15.52■□□□□ 0.07
C9orf47-201ENST00000334490 GRID1Q9ULK0 1009 aa15.52■□□□□ 0.07
C9orf47-201ENST00000334490 C2CD2Q9Y426 696 aa15.52■□□□□ 0.07
C9orf47-201ENST00000334490 ABCC6O95255 1503 aa15.52■□□□□ 0.07
C9orf47-201ENST00000334490 SMIM35A0A1B0GVV1 85 aa15.51■□□□□ 0.07
C9orf47-201ENST00000334490 TRIM49D1C9J1S8 452 aa15.51■□□□□ 0.07
C9orf47-201ENST00000334490 CCDC22O60826 627 aa15.51■□□□□ 0.07
C9orf47-201ENST00000334490 GJB6O95452 261 aa15.51■□□□□ 0.07
C9orf47-201ENST00000334490 CCNG2Q16589 344 aa15.51■□□□□ 0.07
C9orf47-201ENST00000334490 PABPC1LQ4VXU2 614 aaKnown RBP15.51■□□□□ 0.07
C9orf47-201ENST00000334490 ZBTB41Q5SVQ8 909 aa15.51■□□□□ 0.07
C9orf47-201ENST00000334490 LCA5Q86VQ0 697 aa15.51■□□□□ 0.07
C9orf47-201ENST00000334490 NKX2-3Q8TAU0 364 aa15.51■□□□□ 0.07
C9orf47-201ENST00000334490 SGF29Q96ES7 293 aa15.51■□□□□ 0.07
C9orf47-201ENST00000334490 COG4Q9H9E3 785 aa15.51■□□□□ 0.07
C9orf47-201ENST00000334490 TRIM66O15016 1216 aa15.51■□□□□ 0.07
C9orf47-201ENST00000334490 AP5Z1O43299 807 aa15.51■□□□□ 0.07
C9orf47-201ENST00000334490 PRLRP16471 622 aa15.51■□□□□ 0.07
C9orf47-201ENST00000334490 LRRC55Q6ZSA7 311 aa15.51■□□□□ 0.07
C9orf47-201ENST00000334490 NECAB2Q7Z6G3 386 aa15.51■□□□□ 0.07
C9orf47-201ENST00000334490 SLC51AQ86UW1 340 aa15.51■□□□□ 0.07
C9orf47-201ENST00000334490 SLC9A9Q8IVB4 645 aa15.51■□□□□ 0.07
C9orf47-201ENST00000334490 GRAMD1AQ96CP6 724 aa15.51■□□□□ 0.07
C9orf47-201ENST00000334490 FICDQ9BVA6 458 aa15.51■□□□□ 0.07
C9orf47-201ENST00000334490 ROPN1BQ9BZX4 212 aaPredicted RBP15.51■□□□□ 0.07
C9orf47-201ENST00000334490 ROPN1Q9HAT0 212 aaPredicted RBP15.51■□□□□ 0.07
C9orf47-201ENST00000334490 ACP6Q9NPH0 428 aa15.51■□□□□ 0.07
C9orf47-201ENST00000334490 MARCH2Q9P0N8 246 aa15.51■□□□□ 0.07
C9orf47-201ENST00000334490 E2F6O75461 281 aa15.51■□□□□ 0.07
C9orf47-201ENST00000334490 VCPP55072 806 aaKnown RBP15.51■□□□□ 0.07
C9orf47-201ENST00000334490 CNGA2Q16280 664 aa15.51■□□□□ 0.07
C9orf47-201ENST00000334490 ZNF284Q2VY69 593 aa15.51■□□□□ 0.07
C9orf47-201ENST00000334490 TTC39BQ5VTQ0 682 aaPredicted RBP15.51■□□□□ 0.07
C9orf47-201ENST00000334490 LGI2Q8N0V4 545 aa15.51■□□□□ 0.07
C9orf47-201ENST00000334490 ARL8AQ96BM9 186 aa15.51■□□□□ 0.07
C9orf47-201ENST00000334490 ARHGAP10A1A4S6 786 aa15.51■□□□□ 0.07
C9orf47-201ENST00000334490 AMPD1P23109 780 aa15.51■□□□□ 0.07
C9orf47-201ENST00000334490 KCNA10Q16322 511 aa15.51■□□□□ 0.07
C9orf47-201ENST00000334490 GRAMD1BQ3KR37 738 aa15.51■□□□□ 0.07
C9orf47-201ENST00000334490 ILDR2Q71H61 639 aa15.51■□□□□ 0.07
C9orf47-201ENST00000334490 TNFRSF25Q93038 417 aa15.51■□□□□ 0.07
C9orf47-201ENST00000334490 SGSM3Q96HU1 749 aa15.51■□□□□ 0.07
C9orf47-201ENST00000334490 LRRC40Q9H9A6 602 aa15.51■□□□□ 0.07
C9orf47-201ENST00000334490 COL20A1Q9P218 1284 aa15.51■□□□□ 0.07
C9orf47-201ENST00000334490 TRMT6Q9UJA5 497 aaKnown RBP15.51■□□□□ 0.07
C9orf47-201ENST00000334490 MRPL42Q9Y6G3 142 aaKnown RBP15.51■□□□□ 0.07
C9orf47-201ENST00000334490 KIF13AQ9H1H9 1805 aa15.5■□□□□ 0.07
C9orf47-201ENST00000334490 ATP5HO75947 161 aa15.5■□□□□ 0.07
C9orf47-201ENST00000334490 SERPINF2P08697 491 aa15.5■□□□□ 0.07
C9orf47-201ENST00000334490 CCNJLQ8IV13 435 aa15.5■□□□□ 0.07
C9orf47-201ENST00000334490 SNX31Q8N9S9 440 aa15.5■□□□□ 0.07
C9orf47-201ENST00000334490 C3orf20Q8ND61 904 aa15.5■□□□□ 0.07
C9orf47-201ENST00000334490 PRMT1Q99873 361 aaKnown RBP15.5■□□□□ 0.07
C9orf47-201ENST00000334490 NAT9Q9BTE0 207 aa15.5■□□□□ 0.07
C9orf47-201ENST00000334490 KDM4CQ9H3R0 1056 aa15.5■□□□□ 0.07
C9orf47-201ENST00000334490 GIT1Q9Y2X7 761 aa15.5■□□□□ 0.07
C9orf47-201ENST00000334490 SYNDIG1LA6NDD5 238 aa15.5■□□□□ 0.07
C9orf47-201ENST00000334490 LRRC10BA6NIK2 292 aa15.5■□□□□ 0.07
C9orf47-201ENST00000334490 CCDC85CA6NKD9 419 aa15.5■□□□□ 0.07
C9orf47-201ENST00000334490 SRP72O76094 671 aaKnown RBP15.5■□□□□ 0.07
C9orf47-201ENST00000334490 NCKAP1LP55160 1127 aa15.5■□□□□ 0.07
C9orf47-201ENST00000334490 AARS2Q5JTZ9 985 aaKnown RBP15.5■□□□□ 0.07
C9orf47-201ENST00000334490 FBXO36Q8NEA4 188 aa15.5■□□□□ 0.07
C9orf47-201ENST00000334490 ACTRT1Q8TDG2 376 aa15.5■□□□□ 0.07
C9orf47-201ENST00000334490 EPS8L1Q8TE68 723 aa15.5■□□□□ 0.07
C9orf47-201ENST00000334490 CEP41Q9BYV8 373 aa15.5■□□□□ 0.07
C9orf47-201ENST00000334490 KCTD10Q9H3F6 313 aa15.5■□□□□ 0.07
C9orf47-201ENST00000334490 NXF3Q9H4D5 531 aaKnown RBP15.5■□□□□ 0.07
C9orf47-201ENST00000334490 CA12O43570 354 aa15.5■□□□□ 0.07
C9orf47-201ENST00000334490 CHN1P15882 459 aa15.5■□□□□ 0.07
C9orf47-201ENST00000334490 GEMIN4P57678 1058 aaKnown RBP15.5■□□□□ 0.07
C9orf47-201ENST00000334490 E2F5Q15329 346 aa15.5■□□□□ 0.07
C9orf47-201ENST00000334490 KAT2BQ92831 832 aa15.5■□□□□ 0.07
C9orf47-201ENST00000334490 ADGRE3Q9BY15 652 aa15.5■□□□□ 0.07
C9orf47-201ENST00000334490 VIPAS39Q9H9C1 493 aa15.5■□□□□ 0.07
C9orf47-201ENST00000334490 AVENQ9NQS1 362 aaPredicted RBP15.5■□□□□ 0.07
C9orf47-201ENST00000334490 PARP4Q9UKK3 1724 aaKnown RBP15.5■□□□□ 0.07
C9orf47-201ENST00000334490 TREHO43280 583 aa15.5■□□□□ 0.07
C9orf47-201ENST00000334490 CALCAP01258 141 aa15.5■□□□□ 0.07
C9orf47-201ENST00000334490 MIPP30301 263 aa15.5■□□□□ 0.07
C9orf47-201ENST00000334490 GRM5P41594 1212 aa15.5■□□□□ 0.07
C9orf47-201ENST00000334490 STARD3Q14849 445 aa15.5■□□□□ 0.07
C9orf47-201ENST00000334490 FAM83EQ2M2I3 478 aa15.5■□□□□ 0.07
C9orf47-201ENST00000334490 C6orf10Q5SRN2 563 aa15.5■□□□□ 0.07
C9orf47-201ENST00000334490 COLGALT1Q8NBJ5 622 aa15.5■□□□□ 0.07
C9orf47-201ENST00000334490 SLAIN1Q8ND83 568 aa15.5■□□□□ 0.07
C9orf47-201ENST00000334490 MIPOL1Q8TD10 442 aa15.5■□□□□ 0.07
C9orf47-201ENST00000334490 NALCNQ8IZF0 1738 aa15.49■□□□□ 0.07
C9orf47-201ENST00000334490 PEAK1Q9H792 1746 aa15.49■□□□□ 0.07
C9orf47-201ENST00000334490 SOWAHBA6NEL2 793 aa15.49■□□□□ 0.07
C9orf47-201ENST00000334490 NT5C1B-RDH14C9J2C7 533 aa15.49■□□□□ 0.07
C9orf47-201ENST00000334490 DARSP14868 501 aaKnown RBP15.49■□□□□ 0.07
C9orf47-201ENST00000334490 YBX3P16989 372 aaKnown RBP eCLIP15.49■□□□□ 0.07
C9orf47-201ENST00000334490 NPR3P17342 541 aa15.49■□□□□ 0.07
C9orf47-201ENST00000334490 ITGALP20701 1170 aa15.49■□□□□ 0.07
C9orf47-201ENST00000334490 RPL9P32969 192 aaKnown RBP15.49■□□□□ 0.07
C9orf47-201ENST00000334490 ATP5C1P36542 298 aaKnown RBP15.49■□□□□ 0.07
C9orf47-201ENST00000334490 MTA1Q13330 715 aa15.49■□□□□ 0.07
C9orf47-201ENST00000334490 ZACNQ401N2 412 aa15.49■□□□□ 0.07
C9orf47-201ENST00000334490 PAPD7Q5XG87 772 aaKnown RBP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms