RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 POU2F2P09086 479 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 ZSCAN20P17040 1043 aaPredicted RBP6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 S100PP25815 95 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 CASP1P29466 404 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 TAGLNQ01995 201 aaKnown RBP6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 BYSLQ13895 437 aaKnown RBP6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 UBAP2Q5T6F2 1119 aaKnown RBP6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 UBQLNLQ8IYU4 475 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 RAD54LQ92698 747 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 PTPRN2Q92932 1015 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 CREB3L1Q96BA8 519 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 IL17RAQ96F46 866 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 THAP9Q9H5L6 903 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 BIN3Q9NQY0 253 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 PCDHB16Q9NRJ7 776 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 UBP1Q9NZI7 540 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 SAMD9Q5K651 1589 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 PLEKHG1Q9ULL1 1385 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 CCDC88AQ3V6T2 1871 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 CRYZL1O95825 349 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 GCP02774 474 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 S100A8P05109 93 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 GUCA1AP43080 201 aaPredicted RBP6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 PHC1P78364 1004 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 DDR1Q08345 913 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 TRIM61Q5EBN2 209 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 C11orf96Q7Z7L8 435 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 RDM1Q8NG50 284 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 STOML3Q8TAV4 291 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 C19orf12Q9NSK7 152 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 PRMT7Q9NVM4 692 aaPredicted RBP6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 LAMP5Q9UJQ1 280 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 AMFRQ9UKV5 643 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 EXOC6BQ9Y2D4 811 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 ACSL4O60488 711 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 ATP5JP18859 108 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 FSHRP23945 695 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 YWHAZP63104 245 aaKnown RBP6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 LRRC63Q05C16 580 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 FBXO48Q5FWF7 155 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 NDUFAF5Q5TEU4 345 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 EXT2Q93063 718 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 CNKSR1Q969H4 720 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 A0A0J9YVX5 310 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 ATP1A4Q13733 1029 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 MCMDC2Q4G0Z9 681 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 OGFRL1Q5TC84 451 aaPredicted RBP6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 CYB5D1Q6P9G0 228 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 HAGHLQ6PII5 290 aaPredicted RBP6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 NAPRTQ6XQN6 538 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 GIMAP5Q96F15 307 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 OR6C65A6NJZ3 312 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 OAZ2O95190 189 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 IFNA17P01571 189 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 MRPL19P49406 292 aaKnown RBP6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 CHRNB3Q05901 458 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 TBX2Q13207 712 aaPredicted RBP6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 YTHDF3Q7Z739 585 aaKnown RBP6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 PHACTR4Q8IZ21 702 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 SRBD1Q8N5C6 995 aaKnown RBP6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 PCYOX1LQ8NBM8 494 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 SUN3Q8TAQ9 357 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 TMCO6Q96DC7 493 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 DCTPP1Q9H773 170 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 BNIP3LO60238 219 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 STX10O60499 249 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 IGFBP1P08833 259 aaPredicted RBP6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 HSD3B1P14060 373 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 ADD2P35612 726 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 RPL6Q02878 288 aaKnown RBP6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 PI16Q6UXB8 463 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 LRRC70Q7Z2Q7 622 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 C16orf71Q8IYS4 520 aaPredicted RBP6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 TDRD5Q8NAT2 981 aaKnown RBP6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 PGBD4Q96DM1 585 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 NSMCE2Q96MF7 247 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 TSSK1BQ9BXA7 367 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 ZNF717Q9BY31 904 aaPredicted RBP6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 PDGFDQ9GZP0 370 aaPredicted RBP6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 GPAMQ9HCL2 828 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 RIC8BQ9NVN3 520 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 PADI4Q9UM07 663 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 MCIDASD6RGH6 385 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 H2AFYO75367 372 aaKnown RBP6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 ITGA10O75578 1167 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 RAB3DO95716 219 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 IL2RBP14784 551 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 PTNP21246 168 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 RRM2P31350 389 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 NFKB2Q00653 900 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 IL18Q14116 193 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 FAM91A1Q658Y4 838 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 CYP4V2Q6ZWL3 525 aaPredicted RBP6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 KCTD1Q719H9 257 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 PEX26Q7Z412 305 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 OSBPL6Q9BZF3 934 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 SLC5A7Q9GZV3 580 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 WWP1Q9H0M0 922 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 ARMC1Q9NVT9 282 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 C15orf41Q9Y2V0 281 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms