RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 SKOR1P84550 965 aa12.27□□□□□ -0.45
HDAC6-201ENST00000334136 PDZD4Q76G19 769 aaPredicted RBP12.27□□□□□ -0.45
HDAC6-201ENST00000334136 PPM1NQ8N819 430 aa12.27□□□□□ -0.45
HDAC6-201ENST00000334136 DIS3LQ8TF46 1054 aaKnown RBP12.27□□□□□ -0.45
HDAC6-201ENST00000334136 TRIM62Q9BVG3 475 aa12.27□□□□□ -0.45
HDAC6-201ENST00000334136 RNF39Q9H2S5 420 aa12.27□□□□□ -0.45
HDAC6-201ENST00000334136 ASNSD1Q9NWL6 643 aa12.27□□□□□ -0.45
HDAC6-201ENST00000334136 IRAK4Q9NWZ3 460 aa12.27□□□□□ -0.45
HDAC6-201ENST00000334136 DONSONQ9NYP3 566 aa12.27□□□□□ -0.45
HDAC6-201ENST00000334136 SSX2IPQ9Y2D8 614 aa12.27□□□□□ -0.45
HDAC6-201ENST00000334136 ZMYM2Q9UBW7 1377 aa12.27□□□□□ -0.45
HDAC6-201ENST00000334136 CEP290O15078 2479 aa12.27□□□□□ -0.45
HDAC6-201ENST00000334136 ATAD5Q96QE3 1844 aa12.27□□□□□ -0.45
HDAC6-201ENST00000334136 COPEO14579 308 aa12.27□□□□□ -0.45
HDAC6-201ENST00000334136 ARL4AP40617 200 aa12.27□□□□□ -0.45
HDAC6-201ENST00000334136 RPL10AP62906 217 aaKnown RBP12.27□□□□□ -0.45
HDAC6-201ENST00000334136 IRX1P78414 480 aaPredicted RBP12.27□□□□□ -0.45
HDAC6-201ENST00000334136 C2CD6Q53TS8 623 aa12.27□□□□□ -0.45
HDAC6-201ENST00000334136 ZSWIM2Q8NEG5 633 aa12.27□□□□□ -0.45
HDAC6-201ENST00000334136 CEP70Q8NHQ1 597 aa12.27□□□□□ -0.45
HDAC6-201ENST00000334136 KAT5Q92993 513 aa12.27□□□□□ -0.45
HDAC6-201ENST00000334136 PGLYRP2Q96PD5 576 aa12.27□□□□□ -0.45
HDAC6-201ENST00000334136 MED15Q96RN5 788 aa12.27□□□□□ -0.45
HDAC6-201ENST00000334136 CARD9Q9H257 536 aa12.27□□□□□ -0.45
HDAC6-201ENST00000334136 ADAMTS10Q9H324 1103 aa12.27□□□□□ -0.45
HDAC6-201ENST00000334136 SPG21Q9NZD8 308 aa12.27□□□□□ -0.45
HDAC6-201ENST00000334136 SQORQ9Y6N5 450 aa12.27□□□□□ -0.45
HDAC6-201ENST00000334136 FSBPO95073 299 aa12.26□□□□□ -0.45
HDAC6-201ENST00000334136 ATP6V1G2O95670 118 aa12.26□□□□□ -0.45
HDAC6-201ENST00000334136 CPP00450 1065 aa12.26□□□□□ -0.45
HDAC6-201ENST00000334136 CHRNA1P02708 482 aa12.26□□□□□ -0.45
HDAC6-201ENST00000334136 LAG3P18627 525 aa12.26□□□□□ -0.45
HDAC6-201ENST00000334136 PAX3P23760 479 aa12.26□□□□□ -0.45
HDAC6-201ENST00000334136 C9orf57Q5W0N0 161 aa12.26□□□□□ -0.45
HDAC6-201ENST00000334136 TMEM192Q8IY95 271 aa12.26□□□□□ -0.45
HDAC6-201ENST00000334136 CNPY4Q8N129 248 aa12.26□□□□□ -0.45
HDAC6-201ENST00000334136 KCTD6Q8NC69 237 aa12.26□□□□□ -0.45
HDAC6-201ENST00000334136 PPWD1Q96BP3 646 aaKnown RBP12.26□□□□□ -0.45
HDAC6-201ENST00000334136 Q9H521 79 aa12.26□□□□□ -0.45
HDAC6-201ENST00000334136 PDLIM7Q9NR12 457 aa12.26□□□□□ -0.45
HDAC6-201ENST00000334136 PARVAQ9NVD7 372 aa12.26□□□□□ -0.45
HDAC6-201ENST00000334136 MARCOQ9UEW3 520 aaPredicted RBP12.26□□□□□ -0.45
HDAC6-201ENST00000334136 HAO1Q9UJM8 370 aa12.26□□□□□ -0.45
HDAC6-201ENST00000334136 STK10O94804 968 aaKnown RBP12.26□□□□□ -0.45
HDAC6-201ENST00000334136 TJP3O95049 919 aa12.26□□□□□ -0.45
HDAC6-201ENST00000334136 CPA2P48052 419 aa12.26□□□□□ -0.45
HDAC6-201ENST00000334136 ARSEP51690 589 aa12.26□□□□□ -0.45
HDAC6-201ENST00000334136 MARSP56192 900 aaKnown RBP12.26□□□□□ -0.45
HDAC6-201ENST00000334136 KCNMA1Q12791 1236 aa12.26□□□□□ -0.45
HDAC6-201ENST00000334136 ST13P4Q8IZP2 240 aaPredicted RBP12.26□□□□□ -0.45
HDAC6-201ENST00000334136 DCLK2Q8N568 766 aa12.26□□□□□ -0.45
HDAC6-201ENST00000334136 C1orf131Q8NDD1 294 aaKnown RBP12.26□□□□□ -0.45
HDAC6-201ENST00000334136 SNX27Q96L92 541 aa12.26□□□□□ -0.45
HDAC6-201ENST00000334136 FAM129AQ9BZQ8 928 aa12.26□□□□□ -0.45
HDAC6-201ENST00000334136 MRPL17Q9NRX2 175 aaKnown RBP12.26□□□□□ -0.45
HDAC6-201ENST00000334136 PCSK1NQ9UHG2 260 aa12.26□□□□□ -0.45
HDAC6-201ENST00000334136 PCDHB5Q9Y5E4 795 aa12.26□□□□□ -0.45
HDAC6-201ENST00000334136 FAM47DPA6NHR8 397 aa12.26□□□□□ -0.45
HDAC6-201ENST00000334136 STBD1O95210 358 aa12.26□□□□□ -0.45
HDAC6-201ENST00000334136 ASS1P00966 412 aaKnown RBP12.26□□□□□ -0.45
HDAC6-201ENST00000334136 LMNAP02545 664 aaKnown RBP12.26□□□□□ -0.45
HDAC6-201ENST00000334136 PBX1P40424 430 aa12.26□□□□□ -0.45
HDAC6-201ENST00000334136 USP41Q3LFD5 358 aa12.26□□□□□ -0.45
HDAC6-201ENST00000334136 MIIPQ5JXC2 388 aa12.26□□□□□ -0.45
HDAC6-201ENST00000334136 DNAJC9Q8WXX5 260 aa12.26□□□□□ -0.45
HDAC6-201ENST00000334136 GRAMD1AQ96CP6 724 aa12.26□□□□□ -0.45
HDAC6-201ENST00000334136 TUBB6Q9BUF5 446 aa12.26□□□□□ -0.45
HDAC6-201ENST00000334136 GPR32O75388 356 aa12.26□□□□□ -0.45
HDAC6-201ENST00000334136 PFKMP08237 780 aa12.26□□□□□ -0.45
HDAC6-201ENST00000334136 OVGP1Q12889 678 aa12.26□□□□□ -0.45
HDAC6-201ENST00000334136 DBN1Q16643 649 aa12.26□□□□□ -0.45
HDAC6-201ENST00000334136 P3H1Q32P28 736 aa12.26□□□□□ -0.45
HDAC6-201ENST00000334136 C1orf127Q8N9H9 656 aa12.26□□□□□ -0.45
HDAC6-201ENST00000334136 ZNF606Q8WXB4 792 aa12.26□□□□□ -0.45
HDAC6-201ENST00000334136 SCYL1Q96KG9 808 aa12.26□□□□□ -0.45
HDAC6-201ENST00000334136 EMILIN2Q9BXX0 1053 aa12.26□□□□□ -0.45
HDAC6-201ENST00000334136 OGDHLQ9ULD0 1010 aa12.26□□□□□ -0.45
HDAC6-201ENST00000334136 SPECC1L-ADORA2AF8WAN1 911 aa12.25□□□□□ -0.45
HDAC6-201ENST00000334136 TMEM253P0C7T8 217 aa12.25□□□□□ -0.45
HDAC6-201ENST00000334136 SRGAP2BP0DMP2 458 aa12.25□□□□□ -0.45
HDAC6-201ENST00000334136 PGM1P36871 562 aa12.25□□□□□ -0.45
HDAC6-201ENST00000334136 ITGA8P53708 1063 aa12.25□□□□□ -0.45
HDAC6-201ENST00000334136 BCAT1P54687 386 aa12.25□□□□□ -0.45
HDAC6-201ENST00000334136 ARL4CP56559 192 aa12.25□□□□□ -0.45
HDAC6-201ENST00000334136 ASPHQ12797 758 aa12.25□□□□□ -0.45
HDAC6-201ENST00000334136 NME3Q13232 169 aa12.25□□□□□ -0.45
HDAC6-201ENST00000334136 RGS9BPQ6ZS82 235 aa12.25□□□□□ -0.45
HDAC6-201ENST00000334136 TRMT10CQ7L0Y3 403 aaKnown RBP12.25□□□□□ -0.45
HDAC6-201ENST00000334136 SLC47A2Q86VL8 602 aa12.25□□□□□ -0.45
HDAC6-201ENST00000334136 ATL2Q8NHH9 583 aa12.25□□□□□ -0.45
HDAC6-201ENST00000334136 ZNF333Q96JL9 665 aa12.25□□□□□ -0.45
HDAC6-201ENST00000334136 TRPC7Q9HCX4 862 aa12.25□□□□□ -0.45
HDAC6-201ENST00000334136 GTF3C4Q9UKN8 822 aa12.25□□□□□ -0.45
HDAC6-201ENST00000334136 IQANK1A0A1B0GTG1 560 aa12.25□□□□□ -0.45
HDAC6-201ENST00000334136 GRAP2O75791 330 aa12.25□□□□□ -0.45
HDAC6-201ENST00000334136 CST3P01034 146 aaPredicted RBP12.25□□□□□ -0.45
HDAC6-201ENST00000334136 CAV1Q03135 178 aa12.25□□□□□ -0.45
HDAC6-201ENST00000334136 MARCH8Q5T0T0 291 aa12.25□□□□□ -0.45
HDAC6-201ENST00000334136 TMC3Q7Z5M5 1100 aa12.25□□□□□ -0.45
HDAC6-201ENST00000334136 PCGF5Q86SE9 256 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms