RNA–Protein interactions for RNA: ENST00000331366.9

CPNE8-201, Transcript of copine 8, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CPNE8, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-201ENST00000331366 TMEM132BQ14DG7 1078 aa9.13□□□□□ -0.95
CPNE8-201ENST00000331366 OGFRL1Q5TC84 451 aaPredicted RBP9.13□□□□□ -0.95
CPNE8-201ENST00000331366 C8orf82Q6P1X6 216 aaPredicted RBP9.13□□□□□ -0.95
CPNE8-201ENST00000331366 LRRC74BQ6ZQY2 392 aa9.13□□□□□ -0.95
CPNE8-201ENST00000331366 ZNF467Q7Z7K2 595 aaPredicted RBP9.13□□□□□ -0.95
CPNE8-201ENST00000331366 CNTN4Q8IWV2 1026 aa9.13□□□□□ -0.95
CPNE8-201ENST00000331366 PDIK1LQ8N165 341 aa9.13□□□□□ -0.95
CPNE8-201ENST00000331366 MARVELD2Q8N4S9 558 aa9.13□□□□□ -0.95
CPNE8-201ENST00000331366 FBXO36Q8NEA4 188 aa9.13□□□□□ -0.95
CPNE8-201ENST00000331366 RFWD2Q8NHY2 731 aa9.13□□□□□ -0.95
CPNE8-201ENST00000331366 MRRFQ96E11 262 aaKnown RBP9.13□□□□□ -0.95
CPNE8-201ENST00000331366 PEBP4Q96S96 227 aa9.13□□□□□ -0.95
CPNE8-201ENST00000331366 RPAP3Q9H6T3 665 aaPredicted RBP9.13□□□□□ -0.95
CPNE8-201ENST00000331366 THAP1Q9NVV9 213 aa9.13□□□□□ -0.95
CPNE8-201ENST00000331366 L3MBTL1Q9Y468 752 aa9.13□□□□□ -0.95
CPNE8-201ENST00000331366 TLDC2A0PJX2 215 aa9.12□□□□□ -0.95
CPNE8-201ENST00000331366 F8VP50 259 aa9.12□□□□□ -0.95
CPNE8-201ENST00000331366 HSPA1AP0DMV8 641 aaKnown RBP9.12□□□□□ -0.95
CPNE8-201ENST00000331366 HSPA1BP0DMV9 641 aaKnown RBP9.12□□□□□ -0.95
CPNE8-201ENST00000331366 IBSPP21815 317 aaPredicted RBP9.12□□□□□ -0.95
CPNE8-201ENST00000331366 LRRC14Q15048 493 aa9.12□□□□□ -0.95
CPNE8-201ENST00000331366 PAFAH1B3Q15102 231 aaKnown RBP9.12□□□□□ -0.95
CPNE8-201ENST00000331366 AP1ARQ63HQ0 302 aa9.12□□□□□ -0.95
CPNE8-201ENST00000331366 TRNP1Q6NT89 227 aa9.12□□□□□ -0.95
CPNE8-201ENST00000331366 LRRC8BQ6P9F7 803 aa9.12□□□□□ -0.95
CPNE8-201ENST00000331366 STRADAQ7RTN6 431 aa9.12□□□□□ -0.95
CPNE8-201ENST00000331366 PDSS2Q86YH6 399 aa9.12□□□□□ -0.95
CPNE8-201ENST00000331366 CDKL3Q8IVW4 592 aaPredicted RBP9.12□□□□□ -0.95
CPNE8-201ENST00000331366 ZNF280CQ8ND82 737 aa9.12□□□□□ -0.95
CPNE8-201ENST00000331366 GSDMBQ8TAX9 411 aa9.12□□□□□ -0.95
CPNE8-201ENST00000331366 THOC1Q96FV9 657 aaKnown RBP9.12□□□□□ -0.95
CPNE8-201ENST00000331366 C9orf72Q96LT7 481 aa9.12□□□□□ -0.95
CPNE8-201ENST00000331366 FNBP1Q96RU3 617 aa9.12□□□□□ -0.95
CPNE8-201ENST00000331366 EBNA1BP2Q99848 306 aaKnown RBP9.12□□□□□ -0.95
CPNE8-201ENST00000331366 SH3GL3Q99963 347 aa9.12□□□□□ -0.95
CPNE8-201ENST00000331366 MSTO1Q9BUK6 570 aa9.12□□□□□ -0.95
CPNE8-201ENST00000331366 NRBP2Q9NSY0 501 aa9.12□□□□□ -0.95
CPNE8-201ENST00000331366 EMCNQ9ULC0 261 aa9.12□□□□□ -0.95
CPNE8-201ENST00000331366 PRPF19Q9UMS4 504 aaKnown RBP9.12□□□□□ -0.95
CPNE8-201ENST00000331366 THSD7BQ9C0I4 1608 aa9.12□□□□□ -0.95
CPNE8-201ENST00000331366 NVLO15381 856 aaKnown RBP9.12□□□□□ -0.95
CPNE8-201ENST00000331366 CD48P09326 243 aa9.12□□□□□ -0.95
CPNE8-201ENST00000331366 ADRA1DP25100 572 aa9.12□□□□□ -0.95
CPNE8-201ENST00000331366 PSMA3P25788 255 aa9.12□□□□□ -0.95
CPNE8-201ENST00000331366 DEUP1Q05D60 604 aa9.12□□□□□ -0.95
CPNE8-201ENST00000331366 TFDP1Q14186 410 aa9.12□□□□□ -0.95
CPNE8-201ENST00000331366 LMBRD2Q68DH5 695 aaPredicted RBP9.12□□□□□ -0.95
CPNE8-201ENST00000331366 TXNRD3NBQ6F5E7 133 aa9.12□□□□□ -0.95
CPNE8-201ENST00000331366 NSMFQ6X4W1 530 aa9.12□□□□□ -0.95
CPNE8-201ENST00000331366 APOBEC3FQ8IUX4 373 aaKnown RBP9.12□□□□□ -0.95
CPNE8-201ENST00000331366 FAM172AQ8WUF8 416 aa9.12□□□□□ -0.95
CPNE8-201ENST00000331366 SLC9A7Q96T83 725 aa9.12□□□□□ -0.95
CPNE8-201ENST00000331366 TMEM120AQ9BXJ8 343 aa9.12□□□□□ -0.95
CPNE8-201ENST00000331366 TRPC7Q9HCX4 862 aa9.12□□□□□ -0.95
CPNE8-201ENST00000331366 A0A088AWK7 358 aa9.12□□□□□ -0.95
CPNE8-201ENST00000331366 GOLGA8IPA6NC78 632 aa9.12□□□□□ -0.95
CPNE8-201ENST00000331366 GOLGA8JA6NMD2 632 aa9.12□□□□□ -0.95
CPNE8-201ENST00000331366 SPDYE16A6NNV3 312 aaPredicted RBP9.12□□□□□ -0.95
CPNE8-201ENST00000331366 TMEM110-MUSTN1A8MSY1 372 aa9.12□□□□□ -0.95
CPNE8-201ENST00000331366 KLHL2O95198 593 aa9.12□□□□□ -0.95
CPNE8-201ENST00000331366 GLDCP23378 1020 aa9.12□□□□□ -0.95
CPNE8-201ENST00000331366 HTR7P34969 479 aa9.12□□□□□ -0.95
CPNE8-201ENST00000331366 IFNAR2P48551 515 aa9.12□□□□□ -0.95
CPNE8-201ENST00000331366 ARTNQ5T4W7 220 aa9.12□□□□□ -0.95
CPNE8-201ENST00000331366 LGSNQ5TDP6 509 aa9.12□□□□□ -0.95
CPNE8-201ENST00000331366 DPY19L2Q6NUT2 758 aa9.12□□□□□ -0.95
CPNE8-201ENST00000331366 DENND1BQ6P3S1 775 aa9.12□□□□□ -0.95
CPNE8-201ENST00000331366 DHRS4L2Q6PKH6 230 aa9.12□□□□□ -0.95
CPNE8-201ENST00000331366 TMEM270Q6UE05 265 aa9.12□□□□□ -0.95
CPNE8-201ENST00000331366 RINLQ6ZS11 566 aa9.12□□□□□ -0.95
CPNE8-201ENST00000331366 ADAT2Q7Z6V5 191 aaKnown RBP9.12□□□□□ -0.95
CPNE8-201ENST00000331366 IGDCC3Q8IVU1 814 aa9.12□□□□□ -0.95
CPNE8-201ENST00000331366 ZBED8Q8IZ13 594 aa9.12□□□□□ -0.95
CPNE8-201ENST00000331366 LRRC52Q8N7C0 313 aa9.12□□□□□ -0.95
CPNE8-201ENST00000331366 PYROXD1Q8WU10 500 aa9.12□□□□□ -0.95
CPNE8-201ENST00000331366 PPP1R14BQ96C90 147 aa9.12□□□□□ -0.95
CPNE8-201ENST00000331366 MAELQ96JY0 434 aaKnown RBP9.12□□□□□ -0.95
CPNE8-201ENST00000331366 MCEEQ96PE7 176 aa9.12□□□□□ -0.95
CPNE8-201ENST00000331366 ZNF184Q99676 751 aaPredicted RBP9.12□□□□□ -0.95
CPNE8-201ENST00000331366 SLC2A11Q9BYW1 496 aa9.12□□□□□ -0.95
CPNE8-201ENST00000331366 FAM155AB1AL88 458 aaPredicted RBP9.11□□□□□ -0.95
CPNE8-201ENST00000331366 CNMDO75829 334 aa9.11□□□□□ -0.95
CPNE8-201ENST00000331366 FGF3P11487 239 aaPredicted RBP9.11□□□□□ -0.95
CPNE8-201ENST00000331366 KRT5P13647 590 aa9.11□□□□□ -0.95
CPNE8-201ENST00000331366 GBP2P32456 591 aaPredicted RBP9.11□□□□□ -0.95
CPNE8-201ENST00000331366 ARFIP2P53365 341 aa9.11□□□□□ -0.95
CPNE8-201ENST00000331366 SEMA3BQ13214 749 aa9.11□□□□□ -0.95
CPNE8-201ENST00000331366 EIF4EBP2Q13542 120 aaPredicted RBP9.11□□□□□ -0.95
CPNE8-201ENST00000331366 STXBP2Q15833 593 aa9.11□□□□□ -0.95
CPNE8-201ENST00000331366 KHDC1Q4VXA5 237 aaKnown RBP9.11□□□□□ -0.95
CPNE8-201ENST00000331366 SCARA3Q6AZY7 606 aa9.11□□□□□ -0.95
CPNE8-201ENST00000331366 GPAT2Q6NUI2 795 aa9.11□□□□□ -0.95
CPNE8-201ENST00000331366 SLC26A9Q7LBE3 791 aa9.11□□□□□ -0.95
CPNE8-201ENST00000331366 NUDCD1Q96RS6 583 aa9.11□□□□□ -0.95
CPNE8-201ENST00000331366 TMEM39BQ9GZU3 492 aa9.11□□□□□ -0.95
CPNE8-201ENST00000331366 SLCO1B3Q9NPD5 702 aa9.11□□□□□ -0.95
CPNE8-201ENST00000331366 HOXC10Q9NYD6 342 aa9.11□□□□□ -0.95
CPNE8-201ENST00000331366 ERI2A8K979 691 aaKnown RBP9.11□□□□□ -0.95
CPNE8-201ENST00000331366 AP3B1O00203 1094 aa9.11□□□□□ -0.95
CPNE8-201ENST00000331366 CST3P01034 146 aaPredicted RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms