RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 TCOF1Q13428 1488 aaKnown RBP16.93■□□□□ 0.3
SMAD3-201ENST00000327367 FOXN3O00409 490 aaPredicted RBP16.93■□□□□ 0.3
SMAD3-201ENST00000327367 DCXO43602 365 aa16.93■□□□□ 0.3
SMAD3-201ENST00000327367 DBTP11182 482 aaKnown RBP16.93■□□□□ 0.3
SMAD3-201ENST00000327367 FCGR1AP12314 374 aa16.93■□□□□ 0.3
SMAD3-201ENST00000327367 CRKP46108 304 aa16.93■□□□□ 0.3
SMAD3-201ENST00000327367 CNTN1Q12860 1018 aa16.93■□□□□ 0.3
SMAD3-201ENST00000327367 FAM182BQ5T319 152 aa16.93■□□□□ 0.3
SMAD3-201ENST00000327367 DNAJC14Q6Y2X3 702 aaPredicted RBP16.93■□□□□ 0.3
SMAD3-201ENST00000327367 BPIFB6Q8NFQ5 453 aa16.93■□□□□ 0.3
SMAD3-201ENST00000327367 ARMC7Q9H6L4 198 aa16.93■□□□□ 0.3
SMAD3-201ENST00000327367 ZNF446Q9NWS9 450 aa16.93■□□□□ 0.3
SMAD3-201ENST00000327367 NAGPAQ9UK23 515 aa16.93■□□□□ 0.3
SMAD3-201ENST00000327367 TAF6LQ9Y6J9 622 aa16.93■□□□□ 0.3
SMAD3-201ENST00000327367 ZBTB11O95625 1053 aaPredicted RBP16.93■□□□□ 0.3
SMAD3-201ENST00000327367 APOA4P06727 396 aa16.93■□□□□ 0.3
SMAD3-201ENST00000327367 PKN2Q16513 984 aaKnown RBP16.93■□□□□ 0.3
SMAD3-201ENST00000327367 EFL1Q7Z2Z2 1120 aaKnown RBP16.93■□□□□ 0.3
SMAD3-201ENST00000327367 TNIP3Q96KP6 325 aa16.93■□□□□ 0.3
SMAD3-201ENST00000327367 NMRK2Q9NPI5 230 aa16.93■□□□□ 0.3
SMAD3-201ENST00000327367 ZNF335Q9H4Z2 1342 aaPredicted RBP16.93■□□□□ 0.3
SMAD3-201ENST00000327367 CCDC182A6NF36 153 aa16.93■□□□□ 0.3
SMAD3-201ENST00000327367 KRT20P35900 424 aa16.93■□□□□ 0.3
SMAD3-201ENST00000327367 POU5F1Q01860 360 aaKnown RBP16.93■□□□□ 0.3
SMAD3-201ENST00000327367 MACC1Q6ZN28 852 aa16.93■□□□□ 0.3
SMAD3-201ENST00000327367 DHRSXQ8N5I4 330 aa16.93■□□□□ 0.3
SMAD3-201ENST00000327367 KLHL23Q8NBE8 558 aa16.93■□□□□ 0.3
SMAD3-201ENST00000327367 ELMO3Q96BJ8 720 aa16.93■□□□□ 0.3
SMAD3-201ENST00000327367 NUAK2Q9H093 628 aa16.93■□□□□ 0.3
SMAD3-201ENST00000327367 TUFT1Q9NNX1 390 aa16.93■□□□□ 0.3
SMAD3-201ENST00000327367 WBP11Q9Y2W2 641 aaKnown RBP16.93■□□□□ 0.3
SMAD3-201ENST00000327367 ABCC10Q5T3U5 1492 aa16.93■□□□□ 0.3
SMAD3-201ENST00000327367 TNPO2O14787 897 aaKnown RBP16.93■□□□□ 0.3
SMAD3-201ENST00000327367 TM9SF1O15321 606 aa16.93■□□□□ 0.3
SMAD3-201ENST00000327367 ENTPD5O75356 428 aa16.93■□□□□ 0.3
SMAD3-201ENST00000327367 CDH3P22223 829 aa16.93■□□□□ 0.3
SMAD3-201ENST00000327367 FASTKQ14296 549 aaKnown RBP16.93■□□□□ 0.3
SMAD3-201ENST00000327367 CCDC153Q494R4 210 aa16.93■□□□□ 0.3
SMAD3-201ENST00000327367 PYDC2Q56P42 97 aa16.93■□□□□ 0.3
SMAD3-201ENST00000327367 KLHL24Q6TFL4 600 aa16.93■□□□□ 0.3
SMAD3-201ENST00000327367 TCAIMQ8N3R3 496 aa16.93■□□□□ 0.3
SMAD3-201ENST00000327367 MAGEE2Q8TD90 523 aaPredicted RBP16.93■□□□□ 0.3
SMAD3-201ENST00000327367 UBP1Q9NZI7 540 aa16.93■□□□□ 0.3
SMAD3-201ENST00000327367 CCDC167Q9P0B6 97 aa16.93■□□□□ 0.3
SMAD3-201ENST00000327367 WDR35Q9P2L0 1181 aa16.93■□□□□ 0.3
SMAD3-201ENST00000327367 ERI2A8K979 691 aaKnown RBP16.93■□□□□ 0.3
SMAD3-201ENST00000327367 SSNA1O43805 119 aa16.93■□□□□ 0.3
SMAD3-201ENST00000327367 ROR2Q01974 943 aaKnown RBP16.93■□□□□ 0.3
SMAD3-201ENST00000327367 ARHGEF19Q8IW93 802 aa16.93■□□□□ 0.3
SMAD3-201ENST00000327367 NSUN6Q8TEA1 469 aaKnown RBP16.93■□□□□ 0.3
SMAD3-201ENST00000327367 CEP41Q9BYV8 373 aa16.93■□□□□ 0.3
SMAD3-201ENST00000327367 TRMT13Q9NUP7 481 aaKnown RBP16.93■□□□□ 0.3
SMAD3-201ENST00000327367 CROTQ9UKG9 612 aa16.93■□□□□ 0.3
SMAD3-201ENST00000327367 IGKV5-2P06315 115 aa16.92■□□□□ 0.3
SMAD3-201ENST00000327367 GPC1P35052 558 aa16.92■□□□□ 0.3
SMAD3-201ENST00000327367 EPHA7Q15375 998 aa16.92■□□□□ 0.3
SMAD3-201ENST00000327367 PCDH20Q8N6Y1 951 aaKnown RBP16.92■□□□□ 0.3
SMAD3-201ENST00000327367 TSPAN14Q8NG11 270 aa16.92■□□□□ 0.3
SMAD3-201ENST00000327367 RPRD1BQ9NQG5 326 aaKnown RBP16.92■□□□□ 0.3
SMAD3-201ENST00000327367 TOR4AQ9NXH8 423 aa16.92■□□□□ 0.3
SMAD3-201ENST00000327367 KANSL1LA0AUZ9 987 aa16.92■□□□□ 0.3
SMAD3-201ENST00000327367 TSPAN19P0C672 248 aa16.92■□□□□ 0.3
SMAD3-201ENST00000327367 TBC1D19Q8N5T2 526 aa16.92■□□□□ 0.3
SMAD3-201ENST00000327367 URGCPQ8TCY9 931 aa16.92■□□□□ 0.3
SMAD3-201ENST00000327367 TBATAQ96M53 351 aa16.92■□□□□ 0.3
SMAD3-201ENST00000327367 MED15Q96RN5 788 aa16.92■□□□□ 0.3
SMAD3-201ENST00000327367 ACOX2Q99424 681 aa16.92■□□□□ 0.3
SMAD3-201ENST00000327367 PIN4Q9Y237 131 aaKnown RBP16.92■□□□□ 0.3
SMAD3-201ENST00000327367 A0A087WXM4 84 aa16.92■□□□□ 0.3
SMAD3-201ENST00000327367 LDLRP01130 860 aa16.92■□□□□ 0.3
SMAD3-201ENST00000327367 SLC2A4P14672 509 aa16.92■□□□□ 0.3
SMAD3-201ENST00000327367 ITGA3P26006 1051 aa16.92■□□□□ 0.3
SMAD3-201ENST00000327367 PBLDP30039 288 aaPredicted RBP16.92■□□□□ 0.3
SMAD3-201ENST00000327367 AP3M2P53677 418 aa16.92■□□□□ 0.3
SMAD3-201ENST00000327367 SLC25A3Q00325 362 aa16.92■□□□□ 0.3
SMAD3-201ENST00000327367 CLEC10AQ8IUN9 316 aa16.92■□□□□ 0.3
SMAD3-201ENST00000327367 ZNF75CPQ92670 426 aaPredicted RBP16.92■□□□□ 0.3
SMAD3-201ENST00000327367 VPS33AQ96AX1 596 aa16.92■□□□□ 0.3
SMAD3-201ENST00000327367 WRNIP1Q96S55 665 aa16.92■□□□□ 0.3
SMAD3-201ENST00000327367 PADI4Q9UM07 663 aa16.92■□□□□ 0.3
SMAD3-201ENST00000327367 ATP10BO94823 1461 aa16.92■□□□□ 0.3
SMAD3-201ENST00000327367 LTFP02788 710 aa16.92■□□□□ 0.3
SMAD3-201ENST00000327367 TMEM132DQ14C87 1099 aa16.92■□□□□ 0.3
SMAD3-201ENST00000327367 NAPEPLDQ6IQ20 393 aa16.92■□□□□ 0.3
SMAD3-201ENST00000327367 TBCDQ9BTW9 1192 aa16.92■□□□□ 0.3
SMAD3-201ENST00000327367 TRNAU1APQ9NX07 287 aaKnown RBP16.92■□□□□ 0.3
SMAD3-201ENST00000327367 PCDHB2Q9Y5E7 798 aa16.92■□□□□ 0.3
SMAD3-201ENST00000327367 PMF1-BGLAPU3KQ54 211 aa16.92■□□□□ 0.3
SMAD3-201ENST00000327367 CTDNEP1O95476 244 aa16.92■□□□□ 0.3
SMAD3-201ENST00000327367 RPL21P46778 160 aaKnown RBP16.92■□□□□ 0.3
SMAD3-201ENST00000327367 GCLCP48506 637 aaPredicted RBP16.92■□□□□ 0.3
SMAD3-201ENST00000327367 STX4Q12846 297 aa16.92■□□□□ 0.3
SMAD3-201ENST00000327367 APOL4Q9BPW4 351 aa16.92■□□□□ 0.3
SMAD3-201ENST00000327367 BDH2Q9BUT1 245 aa16.92■□□□□ 0.3
SMAD3-201ENST00000327367 RNPEPL1Q9HAU8 725 aa16.92■□□□□ 0.3
SMAD3-201ENST00000327367 PCDH12Q9NPG4 1184 aa16.92■□□□□ 0.3
SMAD3-201ENST00000327367 SEC24AO95486 1093 aa16.91■□□□□ 0.3
SMAD3-201ENST00000327367 NCAM1P13591 858 aa16.91■□□□□ 0.3
SMAD3-201ENST00000327367 CCNHP51946 323 aaPredicted RBP16.91■□□□□ 0.3
SMAD3-201ENST00000327367 NSMCE2Q96MF7 247 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms