RNA–Protein interactions for RNA: ENST00000326656.12

PTPMT1-201, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-201ENST00000326656 PMS2CLQ68D20 193 aa18.68■□□□□ 0.58
PTPMT1-201ENST00000326656 TADA2BQ86TJ2 420 aa18.68■□□□□ 0.58
PTPMT1-201ENST00000326656 C12orf40Q86WS4 652 aa18.68■□□□□ 0.58
PTPMT1-201ENST00000326656 BBS7Q8IWZ6 715 aa18.68■□□□□ 0.58
PTPMT1-201ENST00000326656 ALLCQ8N6M5 410 aa18.68■□□□□ 0.58
PTPMT1-201ENST00000326656 TXNDC5Q8NBS9 432 aaKnown RBP18.68■□□□□ 0.58
PTPMT1-201ENST00000326656 WHAMMQ8TF30 809 aa18.68■□□□□ 0.58
PTPMT1-201ENST00000326656 UBXN6Q9BZV1 441 aa18.68■□□□□ 0.58
PTPMT1-201ENST00000326656 APOBEC3GQ9HC16 384 aaKnown RBP18.68■□□□□ 0.58
PTPMT1-201ENST00000326656 RMND1Q9NWS8 449 aa18.68■□□□□ 0.58
PTPMT1-201ENST00000326656 WDR35Q9P2L0 1181 aa18.68■□□□□ 0.58
PTPMT1-201ENST00000326656 STARD13Q9Y3M8 1113 aa18.68■□□□□ 0.58
PTPMT1-201ENST00000326656 MYO18AQ92614 2054 aaKnown RBP18.68■□□□□ 0.58
PTPMT1-201ENST00000326656 ABCA7Q8IZY2 2146 aa18.68■□□□□ 0.58
PTPMT1-201ENST00000326656 SGK1O00141 431 aa18.67■□□□□ 0.58
PTPMT1-201ENST00000326656 SCAMP3O14828 347 aaKnown RBP18.67■□□□□ 0.58
PTPMT1-201ENST00000326656 GREM1O60565 184 aa18.67■□□□□ 0.58
PTPMT1-201ENST00000326656 TULP3O75386 442 aa18.67■□□□□ 0.58
PTPMT1-201ENST00000326656 KLF8O95600 359 aaPredicted RBP18.67■□□□□ 0.58
PTPMT1-201ENST00000326656 TRIM49P0CI25 452 aa18.67■□□□□ 0.58
PTPMT1-201ENST00000326656 TRIM49CP0CI26 452 aa18.67■□□□□ 0.58
PTPMT1-201ENST00000326656 ADORA2BP29275 332 aa18.67■□□□□ 0.58
PTPMT1-201ENST00000326656 TIE1P35590 1138 aa18.67■□□□□ 0.58
PTPMT1-201ENST00000326656 PLA2G4AP47712 749 aa18.67■□□□□ 0.58
PTPMT1-201ENST00000326656 CREB5Q02930 508 aa18.67■□□□□ 0.58
PTPMT1-201ENST00000326656 ORC1Q13415 861 aa18.67■□□□□ 0.58
PTPMT1-201ENST00000326656 TMEM92Q6UXU6 159 aa18.67■□□□□ 0.58
PTPMT1-201ENST00000326656 TMEM25Q86YD3 366 aa18.67■□□□□ 0.58
PTPMT1-201ENST00000326656 MDGA1Q8NFP4 955 aa18.67■□□□□ 0.58
PTPMT1-201ENST00000326656 TWNKQ96RR1 684 aa18.67■□□□□ 0.58
PTPMT1-201ENST00000326656 CDK5RAP1Q96SZ6 601 aaKnown RBP18.67■□□□□ 0.58
PTPMT1-201ENST00000326656 DUSP16Q9BY84 665 aa18.67■□□□□ 0.58
PTPMT1-201ENST00000326656 GTPBP4Q9BZE4 634 aaKnown RBP18.67■□□□□ 0.58
PTPMT1-201ENST00000326656 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.67■□□□□ 0.583e-6■■■■■ 62.5
PTPMT1-201ENST00000326656 CLIC5Q9NZA1 410 aa18.67■□□□□ 0.58
PTPMT1-201ENST00000326656 MARK1Q9P0L2 795 aa18.67■□□□□ 0.58
PTPMT1-201ENST00000326656 LSM7Q9UK45 103 aaKnown RBP18.67■□□□□ 0.58
PTPMT1-201ENST00000326656 THADAQ6YHU6 1953 aa18.67■□□□□ 0.58
PTPMT1-201ENST00000326656 NUP205Q92621 2012 aa18.67■□□□□ 0.58
PTPMT1-201ENST00000326656 CETN3O15182 167 aa18.66■□□□□ 0.58
PTPMT1-201ENST00000326656 ACO1P21399 889 aaKnown RBP18.66■□□□□ 0.58
PTPMT1-201ENST00000326656 P2RY2P41231 377 aa18.66■□□□□ 0.58
PTPMT1-201ENST00000326656 PGFP49763 221 aa18.66■□□□□ 0.58
PTPMT1-201ENST00000326656 KIF11P52732 1056 aa18.66■□□□□ 0.58
PTPMT1-201ENST00000326656 MESP2Q0VG99 397 aa18.66■□□□□ 0.58
PTPMT1-201ENST00000326656 CCDC6Q16204 474 aa18.66■□□□□ 0.58
PTPMT1-201ENST00000326656 ANO4Q32M45 955 aa18.66■□□□□ 0.58
PTPMT1-201ENST00000326656 CCDC186Q7Z3E2 898 aa18.66■□□□□ 0.58
PTPMT1-201ENST00000326656 XPO6Q96QU8 1125 aaKnown RBP18.66■□□□□ 0.58
PTPMT1-201ENST00000326656 TPSD1Q9BZJ3 242 aa18.66■□□□□ 0.58
PTPMT1-201ENST00000326656 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.66■□□□□ 0.58
PTPMT1-201ENST00000326656 DNMT3LQ9UJW3 386 aa18.66■□□□□ 0.58
PTPMT1-201ENST00000326656 USP3Q9Y6I4 520 aa18.66■□□□□ 0.58
PTPMT1-201ENST00000326656 LAMA1P25391 3075 aa18.66■□□□□ 0.58
PTPMT1-201ENST00000326656 CHD8Q9HCK8 2581 aa18.66■□□□□ 0.58
PTPMT1-201ENST00000326656 CACNG3O60359 315 aa18.65■□□□□ 0.58
PTPMT1-201ENST00000326656 TBX18O95935 607 aa18.65■□□□□ 0.58
PTPMT1-201ENST00000326656 DPP6P42658 865 aa18.65■□□□□ 0.58
PTPMT1-201ENST00000326656 KDSRQ06136 332 aa18.65■□□□□ 0.58
PTPMT1-201ENST00000326656 COBLL1Q53SF7 1204 aa18.65■□□□□ 0.58
PTPMT1-201ENST00000326656 EMC10Q5UCC4 262 aa18.65■□□□□ 0.58
PTPMT1-201ENST00000326656 SFTPA1Q8IWL2 248 aa18.65■□□□□ 0.58
PTPMT1-201ENST00000326656 TERB1Q8NA31 727 aa18.65■□□□□ 0.58
PTPMT1-201ENST00000326656 FBXL13Q8NEE6 735 aa18.65■□□□□ 0.58
PTPMT1-201ENST00000326656 CHAMP1Q96JM3 812 aa18.65■□□□□ 0.58
PTPMT1-201ENST00000326656 SPACA7Q96KW9 195 aa18.65■□□□□ 0.58
PTPMT1-201ENST00000326656 GSDMAQ96QA5 445 aa18.65■□□□□ 0.58
PTPMT1-201ENST00000326656 LSM14BQ9BX40 385 aaKnown RBP18.65■□□□□ 0.58
PTPMT1-201ENST00000326656 GOLPH3LQ9H4A5 285 aa18.65■□□□□ 0.58
PTPMT1-201ENST00000326656 RXFP3Q9NSD7 469 aa18.65■□□□□ 0.58
PTPMT1-201ENST00000326656 ZNF510Q9Y2H8 683 aa18.65■□□□□ 0.58
PTPMT1-201ENST00000326656 PLXND1Q9Y4D7 1925 aa18.64■□□□□ 0.58
PTPMT1-201ENST00000326656 ANTXRLA6NF34 631 aa18.64■□□□□ 0.57
PTPMT1-201ENST00000326656 KHNYNO15037 678 aaKnown RBP18.64■□□□□ 0.57
PTPMT1-201ENST00000326656 CYP26A1O43174 497 aa18.64■□□□□ 0.57
PTPMT1-201ENST00000326656 ADAM23O75077 832 aa18.64■□□□□ 0.57
PTPMT1-201ENST00000326656 EPB41P11171 864 aaKnown RBP18.64■□□□□ 0.57
PTPMT1-201ENST00000326656 RARGP13631 454 aa18.64■□□□□ 0.57
PTPMT1-201ENST00000326656 HNRNPLP14866 589 aaKnown RBP eCLIP18.64■□□□□ 0.57
PTPMT1-201ENST00000326656 CD58P19256 250 aa18.64■□□□□ 0.57
PTPMT1-201ENST00000326656 MXI1P50539 228 aa18.64■□□□□ 0.57
PTPMT1-201ENST00000326656 RNF43Q68DV7 783 aa18.64■□□□□ 0.57
PTPMT1-201ENST00000326656 LPCAT2Q7L5N7 544 aa18.64■□□□□ 0.57
PTPMT1-201ENST00000326656 GPRIN1Q7Z2K8 1008 aa18.64■□□□□ 0.57
PTPMT1-201ENST00000326656 ZNF513Q8N8E2 541 aaPredicted RBP18.64■□□□□ 0.57
PTPMT1-201ENST00000326656 NAT16Q8N8M0 369 aa18.64■□□□□ 0.57
PTPMT1-201ENST00000326656 WBP2Q969T9 261 aa18.64■□□□□ 0.57
PTPMT1-201ENST00000326656 HEXIM2Q96MH2 286 aaKnown RBP18.64■□□□□ 0.57
PTPMT1-201ENST00000326656 BBS2Q9BXC9 721 aa18.64■□□□□ 0.57
PTPMT1-201ENST00000326656 NMUR1Q9HB89 426 aa18.64■□□□□ 0.57
PTPMT1-201ENST00000326656 OSER1Q9NX31 292 aa18.64■□□□□ 0.57
PTPMT1-201ENST00000326656 RAB20Q9NX57 234 aa18.64■□□□□ 0.57
PTPMT1-201ENST00000326656 INVSQ9Y283 1065 aa18.64■□□□□ 0.57
PTPMT1-201ENST00000326656 ZBTB24O43167 697 aaPredicted RBP18.63■□□□□ 0.57
PTPMT1-201ENST00000326656 MAP3K13O43283 966 aa18.63■□□□□ 0.57
PTPMT1-201ENST00000326656 IRF1P10914 325 aa18.63■□□□□ 0.57
PTPMT1-201ENST00000326656 RALAP11233 206 aa18.63■□□□□ 0.57
PTPMT1-201ENST00000326656 TYRP14679 529 aa18.63■□□□□ 0.57
PTPMT1-201ENST00000326656 NTSR1P30989 418 aa18.63■□□□□ 0.57
PTPMT1-201ENST00000326656 SLC8A3P57103 927 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 132.7 ms