RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 TMPRSS4Q9NRS4 437 aa15.98■□□□□ 0.15
PRPF3-201ENST00000324862 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.98■□□□□ 0.15
PRPF3-201ENST00000324862 SMARCAL1Q9NZC9 954 aa15.98■□□□□ 0.15
PRPF3-201ENST00000324862 IL37Q9NZH6 218 aa15.98■□□□□ 0.15
PRPF3-201ENST00000324862 EHD2Q9NZN4 543 aa15.98■□□□□ 0.15
PRPF3-201ENST00000324862 AMFRQ9UKV5 643 aa15.98■□□□□ 0.15
PRPF3-201ENST00000324862 HCFC2Q9Y5Z7 792 aa15.98■□□□□ 0.15
PRPF3-201ENST00000324862 PLXNA3P51805 1871 aa15.98■□□□□ 0.15
PRPF3-201ENST00000324862 CAPN9O14815 690 aa15.98■□□□□ 0.15
PRPF3-201ENST00000324862 MDM4O15151 490 aa15.98■□□□□ 0.15
PRPF3-201ENST00000324862 CCL16O15467 120 aa15.98■□□□□ 0.15
PRPF3-201ENST00000324862 SDC4P31431 198 aa15.98■□□□□ 0.15
PRPF3-201ENST00000324862 MATKP42679 507 aa15.98■□□□□ 0.15
PRPF3-201ENST00000324862 DCAF12L1Q5VU92 463 aa15.98■□□□□ 0.15
PRPF3-201ENST00000324862 DNAJB7Q7Z6W7 309 aaPredicted RBP15.98■□□□□ 0.15
PRPF3-201ENST00000324862 COG1Q8WTW3 980 aa15.98■□□□□ 0.15
PRPF3-201ENST00000324862 CD101Q93033 1021 aa15.98■□□□□ 0.15
PRPF3-201ENST00000324862 PEBP4Q96S96 227 aa15.98■□□□□ 0.15
PRPF3-201ENST00000324862 ZNF334Q9HCZ1 680 aaPredicted RBP15.98■□□□□ 0.15
PRPF3-201ENST00000324862 MAN1C1Q9NR34 630 aa15.98■□□□□ 0.15
PRPF3-201ENST00000324862 SFMBT1Q9UHJ3 866 aa15.98■□□□□ 0.15
PRPF3-201ENST00000324862 SCML2Q9UQR0 700 aa15.98■□□□□ 0.15
PRPF3-201ENST00000324862 NRIP1P48552 1158 aa15.97■□□□□ 0.15
PRPF3-201ENST00000324862 HDAC4P56524 1084 aa15.97■□□□□ 0.15
PRPF3-201ENST00000324862 SMAD3P84022 425 aaKnown RBP15.97■□□□□ 0.15
PRPF3-201ENST00000324862 NME3Q13232 169 aa15.97■□□□□ 0.15
PRPF3-201ENST00000324862 ZNF211Q13398 564 aaPredicted RBP15.97■□□□□ 0.15
PRPF3-201ENST00000324862 HS6ST3Q8IZP7 471 aa15.97■□□□□ 0.15
PRPF3-201ENST00000324862 SYCE1Q8N0S2 351 aa15.97■□□□□ 0.15
PRPF3-201ENST00000324862 HES6Q96HZ4 224 aa15.97■□□□□ 0.15
PRPF3-201ENST00000324862 SLC2A13Q96QE2 648 aa15.97■□□□□ 0.15
PRPF3-201ENST00000324862 DDX23Q9BUQ8 820 aaKnown RBP15.97■□□□□ 0.15
PRPF3-201ENST00000324862 ZNF576Q9H609 170 aa15.97■□□□□ 0.15
PRPF3-201ENST00000324862 HCFC1R1Q9NWW0 138 aa15.97■□□□□ 0.15
PRPF3-201ENST00000324862 FAM92AA1XBS5 289 aa15.97■□□□□ 0.15
PRPF3-201ENST00000324862 DDX3YO15523 660 aaKnown RBP15.97■□□□□ 0.15
PRPF3-201ENST00000324862 MSI1O43347 362 aaKnown RBP15.97■□□□□ 0.15
PRPF3-201ENST00000324862 DAB1O75553 588 aa15.97■□□□□ 0.15
PRPF3-201ENST00000324862 URI1O94763 535 aaPredicted RBP15.97■□□□□ 0.15
PRPF3-201ENST00000324862 SULT1E1P49888 294 aa15.97■□□□□ 0.15
PRPF3-201ENST00000324862 VN1R2Q8NFZ6 395 aa15.97■□□□□ 0.15
PRPF3-201ENST00000324862 KIF18AQ8NI77 898 aa15.97■□□□□ 0.15
PRPF3-201ENST00000324862 FNIP1Q8TF40 1166 aa15.97■□□□□ 0.15
PRPF3-201ENST00000324862 CNPY3Q9BT09 278 aa15.97■□□□□ 0.15
PRPF3-201ENST00000324862 FBXO44Q9H4M3 255 aa15.97■□□□□ 0.15
PRPF3-201ENST00000324862 ZWILCHQ9H900 591 aa15.97■□□□□ 0.15
PRPF3-201ENST00000324862 PATJQ8NI35 1801 aa15.97■□□□□ 0.15
PRPF3-201ENST00000324862 M0QYT0 321 aa15.96■□□□□ 0.15
PRPF3-201ENST00000324862 TADA3O75528 432 aa15.96■□□□□ 0.15
PRPF3-201ENST00000324862 MIPP30301 263 aa15.96■□□□□ 0.15
PRPF3-201ENST00000324862 AMPD2Q01433 879 aa15.96■□□□□ 0.15
PRPF3-201ENST00000324862 PIGHQ14442 188 aaPredicted RBP15.96■□□□□ 0.15
PRPF3-201ENST00000324862 SCYL2Q6P3W7 929 aa15.96■□□□□ 0.15
PRPF3-201ENST00000324862 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.96■□□□□ 0.15
PRPF3-201ENST00000324862 MS4A14Q96JA4 679 aa15.96■□□□□ 0.15
PRPF3-201ENST00000324862 CAPZA3Q96KX2 299 aa15.96■□□□□ 0.15
PRPF3-201ENST00000324862 FAM161BQ96MY7 647 aa15.96■□□□□ 0.15
PRPF3-201ENST00000324862 TTYH1Q9H313 450 aaPredicted RBP15.96■□□□□ 0.15
PRPF3-201ENST00000324862 IGFLR1Q9H665 355 aa15.96■□□□□ 0.15
PRPF3-201ENST00000324862 CCSER2Q9H7U1 834 aa15.96■□□□□ 0.15
PRPF3-201ENST00000324862 ANLNQ9NQW6 1124 aa15.96■□□□□ 0.15
PRPF3-201ENST00000324862 SOX1O00570 391 aaPredicted RBP15.96■□□□□ 0.15
PRPF3-201ENST00000324862 KCNK3O14649 394 aa15.96■□□□□ 0.15
PRPF3-201ENST00000324862 GJA1P17302 382 aa15.96■□□□□ 0.15
PRPF3-201ENST00000324862 SCNN1AP37088 669 aa15.96■□□□□ 0.15
PRPF3-201ENST00000324862 RPS6KA1Q15418 735 aa15.96■□□□□ 0.15
PRPF3-201ENST00000324862 TAF12Q16514 161 aa15.96■□□□□ 0.15
PRPF3-201ENST00000324862 BTBD8Q5XKL5 378 aa15.96■□□□□ 0.15
PRPF3-201ENST00000324862 CYP4V2Q6ZWL3 525 aaPredicted RBP15.96■□□□□ 0.15
PRPF3-201ENST00000324862 ANKS1BQ7Z6G8 1248 aa15.96■□□□□ 0.15
PRPF3-201ENST00000324862 TMEM150AQ86TG1 271 aa15.96■□□□□ 0.15
PRPF3-201ENST00000324862 FAM131BQ86XD5 332 aa15.96■□□□□ 0.15
PRPF3-201ENST00000324862 C12orf76Q8N812 135 aaPredicted RBP15.96■□□□□ 0.15
PRPF3-201ENST00000324862 NIPA2Q8N8Q9 360 aa15.96■□□□□ 0.15
PRPF3-201ENST00000324862 CASP10Q92851 521 aa15.96■□□□□ 0.15
PRPF3-201ENST00000324862 ZNF512Q96ME7 567 aaPredicted RBP15.96■□□□□ 0.15
PRPF3-201ENST00000324862 NPY6RQ99463 290 aa15.96■□□□□ 0.15
PRPF3-201ENST00000324862 PRDM12Q9H4Q4 367 aa15.96■□□□□ 0.15
PRPF3-201ENST00000324862 TLE6Q9H808 572 aa15.96■□□□□ 0.15
PRPF3-201ENST00000324862 PIGVQ9NUD9 493 aa15.96■□□□□ 0.15
PRPF3-201ENST00000324862 GPATCH2LQ9NWQ4 482 aa15.96■□□□□ 0.15
PRPF3-201ENST00000324862 HSFX1Q9UBD0 423 aa15.96■□□□□ 0.15
PRPF3-201ENST00000324862 RTN3O95197 1032 aaPredicted RBP15.95■□□□□ 0.14
PRPF3-201ENST00000324862 NOS2P35228 1153 aa15.95■□□□□ 0.14
PRPF3-201ENST00000324862 PEX5P50542 639 aa15.95■□□□□ 0.14
PRPF3-201ENST00000324862 SLC25A11Q02978 314 aaKnown RBP15.95■□□□□ 0.14
PRPF3-201ENST00000324862 TAC4Q86UU9 113 aa15.95■□□□□ 0.14
PRPF3-201ENST00000324862 MON1AQ86VX9 555 aa15.95■□□□□ 0.14
PRPF3-201ENST00000324862 DQX1Q8TE96 717 aaKnown RBP15.95■□□□□ 0.14
PRPF3-201ENST00000324862 IRGQQ8WZA9 623 aa15.95■□□□□ 0.14
PRPF3-201ENST00000324862 TTLL2Q9BWV7 592 aa15.95■□□□□ 0.14
PRPF3-201ENST00000324862 CDH22Q9UJ99 828 aa15.95■□□□□ 0.14
PRPF3-201ENST00000324862 SNX12Q9UMY4 172 aa15.95■□□□□ 0.14
PRPF3-201ENST00000324862 I6L893 689 aaPredicted RBP15.95■□□□□ 0.14
PRPF3-201ENST00000324862 KIF2AO00139 706 aaPredicted RBP15.95■□□□□ 0.14
PRPF3-201ENST00000324862 DPYSL4O14531 572 aa15.95■□□□□ 0.14
PRPF3-201ENST00000324862 LRG1P02750 347 aa15.95■□□□□ 0.14
PRPF3-201ENST00000324862 GLI1P08151 1106 aa15.95■□□□□ 0.14
PRPF3-201ENST00000324862 EPHB3P54753 998 aa15.95■□□□□ 0.14
PRPF3-201ENST00000324862 KCTD19Q17RG1 926 aaPredicted RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms