RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 RXFP2Q8WXD0 754 aa13.33□□□□□ -0.27
DDX39A-202ENST00000324340 IRGQQ8WZA9 623 aa13.33□□□□□ -0.27
DDX39A-202ENST00000324340 ALG3Q92685 438 aa13.33□□□□□ -0.27
DDX39A-202ENST00000324340 KRT35Q92764 455 aa13.33□□□□□ -0.27
DDX39A-202ENST00000324340 CEP295NLQ96MC4 621 aa13.33□□□□□ -0.27
DDX39A-202ENST00000324340 CLSTN3Q9BQT9 956 aa13.33□□□□□ -0.27
DDX39A-202ENST00000324340 RHOXF2Q9BQY4 288 aa13.33□□□□□ -0.27
DDX39A-202ENST00000324340 CNPY3Q9BT09 278 aa13.33□□□□□ -0.27
DDX39A-202ENST00000324340 C11orf84Q9BUA3 381 aaPredicted RBP13.33□□□□□ -0.27
DDX39A-202ENST00000324340 ABI2Q9NYB9 513 aaPredicted RBP13.33□□□□□ -0.27
DDX39A-202ENST00000324340 HSFX1Q9UBD0 423 aa13.33□□□□□ -0.27
DDX39A-202ENST00000324340 CDY1Q9Y6F8 540 aa13.33□□□□□ -0.27
DDX39A-202ENST00000324340 PLXNA4Q9HCM2 1894 aa13.33□□□□□ -0.28
DDX39A-202ENST00000324340 WDR27A2RRH5 827 aa13.32□□□□□ -0.28
DDX39A-202ENST00000324340 GOLGA6BA6NDN3 693 aa13.32□□□□□ -0.28
DDX39A-202ENST00000324340 KCNK3O14649 394 aa13.32□□□□□ -0.28
DDX39A-202ENST00000324340 ADAM12O43184 909 aa13.32□□□□□ -0.28
DDX39A-202ENST00000324340 LILRB3O75022 631 aa13.32□□□□□ -0.28
DDX39A-202ENST00000324340 DAB1O75553 588 aa13.32□□□□□ -0.28
DDX39A-202ENST00000324340 ABLIM3O94929 683 aa13.32□□□□□ -0.28
DDX39A-202ENST00000324340 ZBED1O96006 694 aa13.32□□□□□ -0.28
DDX39A-202ENST00000324340 URODP06132 367 aa13.32□□□□□ -0.28
DDX39A-202ENST00000324340 PDGFRAP16234 1089 aa13.32□□□□□ -0.28
DDX39A-202ENST00000324340 CXCR5P32302 372 aa13.32□□□□□ -0.28
DDX39A-202ENST00000324340 BMPR1AP36894 532 aa13.32□□□□□ -0.28
DDX39A-202ENST00000324340 GRIK1P39086 918 aa13.32□□□□□ -0.28
DDX39A-202ENST00000324340 CDR1P51861 262 aa13.32□□□□□ -0.28
DDX39A-202ENST00000324340 TAS2R40P59535 323 aa13.32□□□□□ -0.28
DDX39A-202ENST00000324340 YWHAZP63104 245 aaKnown RBP13.32□□□□□ -0.28
DDX39A-202ENST00000324340 ROR1Q01973 937 aa13.32□□□□□ -0.28
DDX39A-202ENST00000324340 IFFO1Q0D2I5 559 aa13.32□□□□□ -0.28
DDX39A-202ENST00000324340 CCDC14Q49A88 953 aa13.32□□□□□ -0.28
DDX39A-202ENST00000324340 EMBQ6PCB8 327 aa13.32□□□□□ -0.28
DDX39A-202ENST00000324340 RNF19BQ6ZMZ0 732 aa13.32□□□□□ -0.28
DDX39A-202ENST00000324340 RHOT1Q8IXI2 618 aa13.32□□□□□ -0.28
DDX39A-202ENST00000324340 VPS52Q8N1B4 723 aa13.32□□□□□ -0.28
DDX39A-202ENST00000324340 ARFGAP1Q8N6T3 406 aa13.32□□□□□ -0.28
DDX39A-202ENST00000324340 ATAD1Q8NBU5 361 aa13.32□□□□□ -0.28
DDX39A-202ENST00000324340 AENQ8WTP8 325 aaKnown RBP13.32□□□□□ -0.28
DDX39A-202ENST00000324340 PGLYRP2Q96PD5 576 aa13.32□□□□□ -0.28
DDX39A-202ENST00000324340 SLC2A13Q96QE2 648 aa13.32□□□□□ -0.28
DDX39A-202ENST00000324340 DDX23Q9BUQ8 820 aaKnown RBP13.32□□□□□ -0.28
DDX39A-202ENST00000324340 PLVAPQ9BX97 442 aa13.32□□□□□ -0.28
DDX39A-202ENST00000324340 ULBP1Q9BZM6 244 aa13.32□□□□□ -0.28
DDX39A-202ENST00000324340 ZBP1Q9H171 429 aa13.32□□□□□ -0.28
DDX39A-202ENST00000324340 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.32□□□□□ -0.28
DDX39A-202ENST00000324340 IL37Q9NZH6 218 aa13.32□□□□□ -0.28
DDX39A-202ENST00000324340 FNIP2Q9P278 1114 aa13.32□□□□□ -0.28
DDX39A-202ENST00000324340 TTC7AQ9ULT0 858 aaPredicted RBP13.32□□□□□ -0.28
DDX39A-202ENST00000324340 LZTS1Q9Y250 596 aa13.32□□□□□ -0.28
DDX39A-202ENST00000324340 SSX2IPQ9Y2D8 614 aa13.32□□□□□ -0.28
DDX39A-202ENST00000324340 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.32□□□□□ -0.28
DDX39A-202ENST00000324340 RWDD3Q9Y3V2 267 aa13.32□□□□□ -0.28
DDX39A-202ENST00000324340 PLXNA3P51805 1871 aa13.32□□□□□ -0.28
DDX39A-202ENST00000324340 MKI67P46013 3256 aaKnown RBP13.32□□□□□ -0.28
DDX39A-202ENST00000324340 LCHNA4D1U4 455 aa13.32□□□□□ -0.28
DDX39A-202ENST00000324340 C5orf67F2Z3F1 127 aa13.32□□□□□ -0.28
DDX39A-202ENST00000324340 LRCH4O75427 683 aa13.32□□□□□ -0.28
DDX39A-202ENST00000324340 GRAP2O75791 330 aa13.32□□□□□ -0.28
DDX39A-202ENST00000324340 CTSAP10619 480 aa13.32□□□□□ -0.28
DDX39A-202ENST00000324340 HAPLN1P10915 354 aaPredicted RBP13.32□□□□□ -0.28
DDX39A-202ENST00000324340 SDC4P31431 198 aa13.32□□□□□ -0.28
DDX39A-202ENST00000324340 OR1D2P34982 312 aa13.32□□□□□ -0.28
DDX39A-202ENST00000324340 PCK1P35558 622 aa13.32□□□□□ -0.28
DDX39A-202ENST00000324340 MATKP42679 507 aa13.32□□□□□ -0.28
DDX39A-202ENST00000324340 MAGEA10P43363 369 aaPredicted RBP13.32□□□□□ -0.28
DDX39A-202ENST00000324340 MARCKSL1P49006 195 aa13.32□□□□□ -0.28
DDX39A-202ENST00000324340 RABGGTBP53611 331 aa13.32□□□□□ -0.28
DDX39A-202ENST00000324340 SLC5A3P53794 718 aa13.32□□□□□ -0.28
DDX39A-202ENST00000324340 RWDD2BP57060 319 aa13.32□□□□□ -0.28
DDX39A-202ENST00000324340 RNASE9P60153 205 aaKnown RBP13.32□□□□□ -0.28
DDX39A-202ENST00000324340 SLC25A11Q02978 314 aaKnown RBP13.32□□□□□ -0.28
DDX39A-202ENST00000324340 CREMQ03060 361 aa13.32□□□□□ -0.28
DDX39A-202ENST00000324340 RAB33AQ14088 237 aa13.32□□□□□ -0.28
DDX39A-202ENST00000324340 SLMAPQ14BN4 828 aa13.32□□□□□ -0.28
DDX39A-202ENST00000324340 ZKSCAN8Q15776 578 aaPredicted RBP13.32□□□□□ -0.28
DDX39A-202ENST00000324340 C9orf50Q5SZB4 431 aa13.32□□□□□ -0.28
DDX39A-202ENST00000324340 TPGS2Q68CL5 300 aa13.32□□□□□ -0.28
DDX39A-202ENST00000324340 BEND5Q7L4P6 421 aa13.32□□□□□ -0.28
DDX39A-202ENST00000324340 BNIPLQ7Z465 357 aa13.32□□□□□ -0.28
DDX39A-202ENST00000324340 POLNQ7Z5Q5 900 aa13.32□□□□□ -0.28
DDX39A-202ENST00000324340 MMGT1Q8N4V1 131 aa13.32□□□□□ -0.28
DDX39A-202ENST00000324340 KLHL23Q8NBE8 558 aa13.32□□□□□ -0.28
DDX39A-202ENST00000324340 ZNF461Q8TAF7 563 aa13.32□□□□□ -0.28
DDX39A-202ENST00000324340 ACTRT1Q8TDG2 376 aa13.32□□□□□ -0.28
DDX39A-202ENST00000324340 CENPIQ92674 756 aaPredicted RBP13.32□□□□□ -0.28
DDX39A-202ENST00000324340 NT5C3BQ969T7 300 aa13.32□□□□□ -0.28
DDX39A-202ENST00000324340 SPATA17Q96L03 361 aa13.32□□□□□ -0.28
DDX39A-202ENST00000324340 PSMB7Q99436 277 aa13.32□□□□□ -0.28
DDX39A-202ENST00000324340 CRISPLD1Q9H336 500 aa13.32□□□□□ -0.28
DDX39A-202ENST00000324340 POPDC2Q9HBU9 364 aa13.32□□□□□ -0.28
DDX39A-202ENST00000324340 RXFP1Q9HBX9 757 aa13.32□□□□□ -0.28
DDX39A-202ENST00000324340 COMMD8Q9NX08 183 aa13.32□□□□□ -0.28
DDX39A-202ENST00000324340 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.32□□□□□ -0.282e-7■■■□□ 15.3
DDX39A-202ENST00000324340 MAFFQ9ULX9 164 aa13.32□□□□□ -0.28
DDX39A-202ENST00000324340 GOLGA6L7A0A1B0GV03 622 aa13.31□□□□□ -0.28
DDX39A-202ENST00000324340 FAM92AA1XBS5 289 aa13.31□□□□□ -0.28
DDX39A-202ENST00000324340 LINC01553A4QN01 128 aa13.31□□□□□ -0.28
DDX39A-202ENST00000324340 YJEFN3A6XGL0 299 aa13.31□□□□□ -0.28
DDX39A-202ENST00000324340 E7ENQ6 273 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms