RNA–Protein interactions for RNA: ENST00000323022.9

CACNA1F-201, Transcript of calcium voltage-gated channel subunit alpha1 F, humanhuman

TSL 1 (best) BASIC

Gene CACNA1F, Length 6,037 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1F-201ENST00000323022 ZCCHC2Q9C0B9 1178 aaKnown RBP12.73□□□□□ -0.37
CACNA1F-201ENST00000323022 USP20Q9Y2K6 914 aa12.73□□□□□ -0.37
CACNA1F-201ENST00000323022 ZNF189O75820 626 aaPredicted RBP12.73□□□□□ -0.37
CACNA1F-201ENST00000323022 BCL2L1Q07817 233 aa12.73□□□□□ -0.37
CACNA1F-201ENST00000323022 DMC1Q14565 340 aa12.73□□□□□ -0.37
CACNA1F-201ENST00000323022 LRRC8EQ6NSJ5 796 aa12.73□□□□□ -0.37
CACNA1F-201ENST00000323022 MTHFD1LQ6UB35 978 aa12.73□□□□□ -0.37
CACNA1F-201ENST00000323022 PTAR1Q7Z6K3 402 aaPredicted RBP12.73□□□□□ -0.37
CACNA1F-201ENST00000323022 FAM131BQ86XD5 332 aa12.73□□□□□ -0.37
CACNA1F-201ENST00000323022 ZFPM1Q8IX07 1006 aa12.73□□□□□ -0.37
CACNA1F-201ENST00000323022 DSELQ8IZU8 1212 aa12.73□□□□□ -0.37
CACNA1F-201ENST00000323022 LRRC4BQ9NT99 713 aa12.73□□□□□ -0.37
CACNA1F-201ENST00000323022 VPS51Q9UID3 782 aa12.73□□□□□ -0.37
CACNA1F-201ENST00000323022 CCDC188H7C350 402 aa12.72□□□□□ -0.37
CACNA1F-201ENST00000323022 ANXA9O76027 345 aa12.72□□□□□ -0.37
CACNA1F-201ENST00000323022 RCAN1P53805 252 aa12.72□□□□□ -0.37
CACNA1F-201ENST00000323022 TRIM32Q13049 653 aa12.72□□□□□ -0.37
CACNA1F-201ENST00000323022 SDHAF4Q5VUM1 108 aa12.72□□□□□ -0.37
CACNA1F-201ENST00000323022 IZUMO3Q5VZ72 239 aa12.72□□□□□ -0.37
CACNA1F-201ENST00000323022 PTF1AQ7RTS3 328 aa12.72□□□□□ -0.37
CACNA1F-201ENST00000323022 OSCP1Q8WVF1 389 aa12.72□□□□□ -0.37
CACNA1F-201ENST00000323022 ANKRD49Q8WVL7 239 aa12.72□□□□□ -0.37
CACNA1F-201ENST00000323022 PRPF18Q99633 342 aaKnown RBP12.72□□□□□ -0.37
CACNA1F-201ENST00000323022 VTI1BQ9UEU0 232 aa12.72□□□□□ -0.37
CACNA1F-201ENST00000323022 RCOR1Q9UKL0 485 aa12.72□□□□□ -0.37
CACNA1F-201ENST00000323022 PCDHB11Q9Y5F2 797 aa12.72□□□□□ -0.37
CACNA1F-201ENST00000323022 GNG14A0A1W2PPG7 69 aa12.72□□□□□ -0.37
CACNA1F-201ENST00000323022 PHF20L1A8MW92 1017 aa12.72□□□□□ -0.37
CACNA1F-201ENST00000323022 PJA2O43164 708 aa12.72□□□□□ -0.37
CACNA1F-201ENST00000323022 TBL1XO60907 577 aa12.72□□□□□ -0.37
CACNA1F-201ENST00000323022 ASGR1P07306 291 aa12.72□□□□□ -0.37
CACNA1F-201ENST00000323022 GARTP22102 1010 aa12.72□□□□□ -0.37
CACNA1F-201ENST00000323022 AXLP30530 894 aa12.72□□□□□ -0.37
CACNA1F-201ENST00000323022 CCR1P32246 355 aa12.72□□□□□ -0.37
CACNA1F-201ENST00000323022 NPTX2P47972 431 aa12.72□□□□□ -0.37
CACNA1F-201ENST00000323022 NPY2RP49146 381 aa12.72□□□□□ -0.37
CACNA1F-201ENST00000323022 GEMP55040 296 aa12.72□□□□□ -0.37
CACNA1F-201ENST00000323022 YWHAZP63104 245 aaKnown RBP12.72□□□□□ -0.37
CACNA1F-201ENST00000323022 TIGD7Q6NT04 549 aaPredicted RBP12.72□□□□□ -0.37
CACNA1F-201ENST00000323022 DENND5BQ6ZUT9 1274 aa12.72□□□□□ -0.37
CACNA1F-201ENST00000323022 DET1Q7L5Y6 550 aa12.72□□□□□ -0.37
CACNA1F-201ENST00000323022 ANKRD23Q86SG2 305 aa12.72□□□□□ -0.37
CACNA1F-201ENST00000323022 RASAL3Q86YV0 1011 aa12.72□□□□□ -0.37
CACNA1F-201ENST00000323022 ALLCQ8N6M5 410 aa12.72□□□□□ -0.37
CACNA1F-201ENST00000323022 WNT8AQ9H1J5 351 aa12.72□□□□□ -0.37
CACNA1F-201ENST00000323022 RERGLQ9H628 205 aa12.72□□□□□ -0.37
CACNA1F-201ENST00000323022 A1CFQ9NQ94 594 aaKnown RBP12.72□□□□□ -0.37
CACNA1F-201ENST00000323022 ST3GAL5Q9UNP4 418 aa12.72□□□□□ -0.37
CACNA1F-201ENST00000323022 DNAJC16Q9Y2G8 782 aa12.72□□□□□ -0.37
CACNA1F-201ENST00000323022 USP32Q8NFA0 1604 aa12.72□□□□□ -0.37
CACNA1F-201ENST00000323022 PDS5AQ29RF7 1337 aaKnown RBP12.72□□□□□ -0.37
CACNA1F-201ENST00000323022 SLC16A3O15427 465 aaKnown RBP12.72□□□□□ -0.37
CACNA1F-201ENST00000323022 FSBPO95073 299 aa12.72□□□□□ -0.37
CACNA1F-201ENST00000323022 PLIN5Q00G26 463 aa12.72□□□□□ -0.37
CACNA1F-201ENST00000323022 LRRC23Q53EV4 343 aaPredicted RBP12.72□□□□□ -0.37
CACNA1F-201ENST00000323022 POMGNT2Q8NAT1 580 aa12.72□□□□□ -0.37
CACNA1F-201ENST00000323022 ELAC2Q9BQ52 826 aaKnown RBP12.72□□□□□ -0.37
CACNA1F-201ENST00000323022 YY1AP1Q9H869 796 aa12.72□□□□□ -0.37
CACNA1F-201ENST00000323022 RNF112Q9ULX5 631 aa12.72□□□□□ -0.37
CACNA1F-201ENST00000323022 PLAAQ9Y263 795 aa12.72□□□□□ -0.37
CACNA1F-201ENST00000323022 POLR1DQ9Y2S0 133 aa12.72□□□□□ -0.37
CACNA1F-201ENST00000323022 PCDHAC2Q9Y5I4 1007 aa12.72□□□□□ -0.37
CACNA1F-201ENST00000323022 ACSL4O60488 711 aa12.72□□□□□ -0.37
CACNA1F-201ENST00000323022 GRSF1Q12849 480 aaKnown RBP eCLIP12.72□□□□□ -0.37
CACNA1F-201ENST00000323022 MAPRE2Q15555 327 aa12.72□□□□□ -0.37
CACNA1F-201ENST00000323022 POP1Q99575 1024 aaKnown RBP12.72□□□□□ -0.37
CACNA1F-201ENST00000323022 CELF4Q9BZC1 486 aaKnown RBP12.72□□□□□ -0.37
CACNA1F-201ENST00000323022 XPO7Q9UIA9 1087 aaKnown RBP12.72□□□□□ -0.37
CACNA1F-201ENST00000323022 SNX8Q9Y5X2 465 aa12.72□□□□□ -0.37
CACNA1F-201ENST00000323022 WDR19Q8NEZ3 1342 aa12.72□□□□□ -0.37
CACNA1F-201ENST00000323022 DCCP43146 1447 aa12.72□□□□□ -0.37
CACNA1F-201ENST00000323022 HOXC6P09630 235 aa12.72□□□□□ -0.37
CACNA1F-201ENST00000323022 ATP5C1P36542 298 aaKnown RBP12.72□□□□□ -0.37
CACNA1F-201ENST00000323022 RTP1P59025 263 aa12.72□□□□□ -0.37
CACNA1F-201ENST00000323022 PPP4CP60510 307 aa12.72□□□□□ -0.37
CACNA1F-201ENST00000323022 ADIGQ0VDE8 80 aa12.72□□□□□ -0.37
CACNA1F-201ENST00000323022 NAPEPLDQ6IQ20 393 aa12.72□□□□□ -0.37
CACNA1F-201ENST00000323022 HIBCHQ6NVY1 386 aaPredicted RBP12.72□□□□□ -0.37
CACNA1F-201ENST00000323022 LRRC8DQ7L1W4 858 aa12.72□□□□□ -0.37
CACNA1F-201ENST00000323022 ZNF410Q86VK4 478 aa12.72□□□□□ -0.37
CACNA1F-201ENST00000323022 ALG13Q9NP73 1137 aaKnown RBP12.72□□□□□ -0.37
CACNA1F-201ENST00000323022 FBXO21O94952 628 aa12.71□□□□□ -0.37
CACNA1F-201ENST00000323022 MMEP08473 750 aa12.71□□□□□ -0.37
CACNA1F-201ENST00000323022 PEX5P50542 639 aa12.71□□□□□ -0.37
CACNA1F-201ENST00000323022 ATP2C1P98194 919 aaPredicted RBP12.71□□□□□ -0.37
CACNA1F-201ENST00000323022 UBE3AQ05086 875 aa12.71□□□□□ -0.37
CACNA1F-201ENST00000323022 CRHR2Q13324 411 aa12.71□□□□□ -0.37
CACNA1F-201ENST00000323022 CUL2Q13617 745 aa12.71□□□□□ -0.37
CACNA1F-201ENST00000323022 TARBP2Q15633 366 aaKnown RBP12.71□□□□□ -0.37
CACNA1F-201ENST00000323022 SCLYQ96I15 445 aa12.71□□□□□ -0.37
CACNA1F-201ENST00000323022 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.71□□□□□ -0.37
CACNA1F-201ENST00000323022 RPRD1BQ9NQG5 326 aaKnown RBP12.71□□□□□ -0.37
CACNA1F-201ENST00000323022 NMRK1Q9NWW6 199 aa12.71□□□□□ -0.37
CACNA1F-201ENST00000323022 HES2Q9Y543 173 aa12.71□□□□□ -0.37
CACNA1F-201ENST00000323022 NCK2O43639 380 aa12.71□□□□□ -0.37
CACNA1F-201ENST00000323022 RAMP2O60895 175 aa12.71□□□□□ -0.37
CACNA1F-201ENST00000323022 PNMA6AP0CW24 399 aaPredicted RBP12.71□□□□□ -0.37
CACNA1F-201ENST00000323022 FOSL2P15408 326 aa12.71□□□□□ -0.37
CACNA1F-201ENST00000323022 GPR1P46091 355 aa12.71□□□□□ -0.37
CACNA1F-201ENST00000323022 NEK2P51955 445 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms