RNA–Protein interactions for RNA: ENST00000322310.9

SSNA1-201, Transcript of SS nuclear autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSNA1, Length 896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-201ENST00000322310 GMIPQ9P107 970 aa20.77■□□□□ 0.92
SSNA1-201ENST00000322310 FRMD3A2A2Y4 597 aa20.76■□□□□ 0.91
SSNA1-201ENST00000322310 A8MXQ7 604 aa20.76■□□□□ 0.91
SSNA1-201ENST00000322310 SLC5A3P53794 718 aa20.76■□□□□ 0.91
SSNA1-201ENST00000322310 SURF1Q15526 300 aa20.76■□□□□ 0.91
SSNA1-201ENST00000322310 WDR72Q3MJ13 1102 aa20.76■□□□□ 0.91
SSNA1-201ENST00000322310 SNX30Q5VWJ9 437 aa20.76■□□□□ 0.91
SSNA1-201ENST00000322310 TPGS1Q6ZTW0 290 aa20.76■□□□□ 0.91
SSNA1-201ENST00000322310 ZCCHC9Q8N567 271 aaKnown RBP20.76■□□□□ 0.91
SSNA1-201ENST00000322310 SCFD1Q8WVM8 642 aa20.76■□□□□ 0.91
SSNA1-201ENST00000322310 TMX3Q96JJ7 454 aa20.76■□□□□ 0.91
SSNA1-201ENST00000322310 DUSP9Q99956 384 aaKnown RBP20.76■□□□□ 0.91
SSNA1-201ENST00000322310 BBS2Q9BXC9 721 aa20.76■□□□□ 0.91
SSNA1-201ENST00000322310 NACA2Q9H009 215 aa20.76■□□□□ 0.91
SSNA1-201ENST00000322310 PANK4Q9NVE7 773 aa20.76■□□□□ 0.91
SSNA1-201ENST00000322310 BPTFQ12830 3046 aa20.75■□□□□ 0.91
SSNA1-201ENST00000322310 MEI4A8MW99 385 aa20.75■□□□□ 0.91
SSNA1-201ENST00000322310 KIAA0391O15091 583 aaKnown RBP20.75■□□□□ 0.91
SSNA1-201ENST00000322310 CACNG3O60359 315 aa20.75■□□□□ 0.91
SSNA1-201ENST00000322310 GREM1O60565 184 aa20.75■□□□□ 0.91
SSNA1-201ENST00000322310 DLATP10515 647 aaKnown RBP20.75■□□□□ 0.91
SSNA1-201ENST00000322310 TYRP14679 529 aa20.75■□□□□ 0.91
SSNA1-201ENST00000322310 CD6P30203 668 aa20.75■□□□□ 0.91
SSNA1-201ENST00000322310 TNNC1P63316 161 aa20.75■□□□□ 0.91
SSNA1-201ENST00000322310 HPS3Q969F9 1004 aa20.75■□□□□ 0.91
SSNA1-201ENST00000322310 CLIC6Q96NY7 704 aa20.75■□□□□ 0.91
SSNA1-201ENST00000322310 ZDHHC5Q9C0B5 715 aa20.75■□□□□ 0.91
SSNA1-201ENST00000322310 MIR1-1HGQ9H1L0 117 aa20.75■□□□□ 0.91
SSNA1-201ENST00000322310 HSPBP1Q9NZL4 362 aa20.75■□□□□ 0.91
SSNA1-201ENST00000322310 CLIC4Q9Y696 253 aa20.75■□□□□ 0.91
SSNA1-201ENST00000322310 ACACAQ13085 2346 aa20.75■□□□□ 0.91
SSNA1-201ENST00000322310 PTPRBP23467 1997 aa20.74■□□□□ 0.91
SSNA1-201ENST00000322310 A0A1B0GTW7 788 aa20.74■□□□□ 0.91
SSNA1-201ENST00000322310 TUBP50607 506 aa20.74■□□□□ 0.91
SSNA1-201ENST00000322310 PAQR9Q6ZVX9 377 aa20.74■□□□□ 0.91
SSNA1-201ENST00000322310 BRAPQ7Z569 592 aa20.74■□□□□ 0.91
SSNA1-201ENST00000322310 FAM35AQ86V20 835 aa20.74■□□□□ 0.91
SSNA1-201ENST00000322310 RDH13Q8NBN7 331 aa20.74■□□□□ 0.91
SSNA1-201ENST00000322310 DNASE2BQ8WZ79 361 aa20.74■□□□□ 0.91
SSNA1-201ENST00000322310 BHMTQ93088 406 aa20.74■□□□□ 0.91
SSNA1-201ENST00000322310 TOE1Q96GM8 510 aaKnown RBP20.74■□□□□ 0.91
SSNA1-201ENST00000322310 CRELD1Q96HD1 420 aa20.74■□□□□ 0.91
SSNA1-201ENST00000322310 XPO6Q96QU8 1125 aaKnown RBP20.74■□□□□ 0.91
SSNA1-201ENST00000322310 GPR174Q9BXC1 333 aa20.74■□□□□ 0.91
SSNA1-201ENST00000322310 GAREM1Q9H706 876 aa20.74■□□□□ 0.91
SSNA1-201ENST00000322310 SCUBE2Q9NQ36 999 aa20.74■□□□□ 0.91
SSNA1-201ENST00000322310 TOR4AQ9NXH8 423 aa20.74■□□□□ 0.91
SSNA1-201ENST00000322310 IL37Q9NZH6 218 aa20.74■□□□□ 0.91
SSNA1-201ENST00000322310 NXF1Q9UBU9 619 aaKnown RBP20.74■□□□□ 0.91
SSNA1-201ENST00000322310 FBXO2Q9UK22 296 aaPredicted RBP20.74■□□□□ 0.91
SSNA1-201ENST00000322310 FNDC3AQ9Y2H6 1198 aaKnown RBP20.74■□□□□ 0.91
SSNA1-201ENST00000322310 EIF4E1BA6NMX2 242 aaKnown RBP20.73■□□□□ 0.91
SSNA1-201ENST00000322310 TLR5O60602 858 aa20.73■□□□□ 0.91
SSNA1-201ENST00000322310 TBX18O95935 607 aa20.73■□□□□ 0.91
SSNA1-201ENST00000322310 ATXN1LP0C7T5 689 aaKnown RBP20.73■□□□□ 0.91
SSNA1-201ENST00000322310 ZDHHC11BP0C7U3 371 aa20.73■□□□□ 0.91
SSNA1-201ENST00000322310 NCAM1P13591 858 aa20.73■□□□□ 0.91
SSNA1-201ENST00000322310 TNNI1P19237 187 aa20.73■□□□□ 0.91
SSNA1-201ENST00000322310 HOXD13P35453 343 aa20.73■□□□□ 0.91
SSNA1-201ENST00000322310 BNC1Q01954 994 aa20.73■□□□□ 0.91
SSNA1-201ENST00000322310 LARP1BQ659C4 914 aaKnown RBP20.73■□□□□ 0.91
SSNA1-201ENST00000322310 HTR3DQ70Z44 454 aa20.73■□□□□ 0.91
SSNA1-201ENST00000322310 TMPRSS7Q7RTY8 843 aa20.73■□□□□ 0.91
SSNA1-201ENST00000322310 COL26A1Q96A83 441 aa20.73■□□□□ 0.91
SSNA1-201ENST00000322310 MED10Q9BTT4 135 aa20.73■□□□□ 0.91
SSNA1-201ENST00000322310 PANK2Q9BZ23 570 aa20.73■□□□□ 0.91
SSNA1-201ENST00000322310 DMAP1Q9NPF5 467 aaPredicted RBP20.73■□□□□ 0.91
SSNA1-201ENST00000322310 WSB2Q9NYS7 404 aaPredicted RBP20.73■□□□□ 0.91
SSNA1-201ENST00000322310 KIAA1522Q9P206 1035 aaPredicted RBP20.73■□□□□ 0.91
SSNA1-201ENST00000322310 CILPO75339 1184 aa20.72■□□□□ 0.91
SSNA1-201ENST00000322310 CD2BP2O95400 341 aaKnown RBP20.72■□□□□ 0.91
SSNA1-201ENST00000322310 FAM163BP0C2L3 166 aa20.72■□□□□ 0.91
SSNA1-201ENST00000322310 CDH8P55286 799 aa20.72■□□□□ 0.91
SSNA1-201ENST00000322310 MYL6P60660 151 aa20.72■□□□□ 0.91
SSNA1-201ENST00000322310 SNRNP35Q16560 246 aaKnown RBP20.72■□□□□ 0.91
SSNA1-201ENST00000322310 FUT11Q495W5 492 aa20.72■□□□□ 0.91
SSNA1-201ENST00000322310 BAHD1Q8TBE0 780 aaPredicted RBP20.72■□□□□ 0.91
SSNA1-201ENST00000322310 CCDC127Q96BQ5 260 aa20.72■□□□□ 0.91
SSNA1-201ENST00000322310 KLF16Q9BXK1 252 aaPredicted RBP20.72■□□□□ 0.91
SSNA1-201ENST00000322310 SMYD3Q9H7B4 428 aa20.72■□□□□ 0.91
SSNA1-201ENST00000322310 PRDM16Q9HAZ2 1276 aa20.72■□□□□ 0.91
SSNA1-201ENST00000322310 TM7SF3Q9NS93 570 aa20.72■□□□□ 0.91
SSNA1-201ENST00000322310 PLK2Q9NYY3 685 aa20.72■□□□□ 0.91
SSNA1-201ENST00000322310 MARK1Q9P0L2 795 aa20.72■□□□□ 0.91
SSNA1-201ENST00000322310 WDR35Q9P2L0 1181 aa20.72■□□□□ 0.91
SSNA1-201ENST00000322310 SMC3Q9UQE7 1217 aa20.72■□□□□ 0.91
SSNA1-201ENST00000322310 A0A087X0B3 334 aa20.71■□□□□ 0.91
SSNA1-201ENST00000322310 FAM92AA1XBS5 289 aa20.71■□□□□ 0.91
SSNA1-201ENST00000322310 GOLGA8CPA6NN73 597 aa20.71■□□□□ 0.91
SSNA1-201ENST00000322310 KCNJ18B7U540 433 aa20.71■□□□□ 0.91
SSNA1-201ENST00000322310 CISD3P0C7P0 127 aa20.71■□□□□ 0.91
SSNA1-201ENST00000322310 TXLNAP40222 546 aa20.71■□□□□ 0.91
SSNA1-201ENST00000322310 DGKGP49619 791 aa20.71■□□□□ 0.91
SSNA1-201ENST00000322310 CYP4F3Q08477 520 aa20.71■□□□□ 0.91
SSNA1-201ENST00000322310 P2RY11Q96G91 374 aa20.71■□□□□ 0.91
SSNA1-201ENST00000322310 CGRRF1Q99675 332 aa20.71■□□□□ 0.91
SSNA1-201ENST00000322310 MKRN2Q9H000 416 aaKnown RBP20.71■□□□□ 0.91
SSNA1-201ENST00000322310 XYLT2Q9H1B5 865 aa20.71■□□□□ 0.91
SSNA1-201ENST00000322310 KIAA1586Q9HCI6 787 aa20.71■□□□□ 0.91
SSNA1-201ENST00000322310 KRT82Q9NSB4 513 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms