RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 AARSP49588 968 aaKnown RBP eCLIP11.4□□□□□ -0.58
TOP3A-201ENST00000321105 ERMARDQ5T6L9 678 aa11.4□□□□□ -0.58
TOP3A-201ENST00000321105 FOXR2Q6PJQ5 311 aa11.4□□□□□ -0.58
TOP3A-201ENST00000321105 BBS5Q8N3I7 341 aa11.4□□□□□ -0.58
TOP3A-201ENST00000321105 STAMBPL1Q96FJ0 436 aa11.4□□□□□ -0.58
TOP3A-201ENST00000321105 VCPIP1Q96JH7 1222 aa11.4□□□□□ -0.58
TOP3A-201ENST00000321105 SLCO1B3Q9NPD5 702 aa11.4□□□□□ -0.58
TOP3A-201ENST00000321105 STARD7Q9NQZ5 370 aa11.4□□□□□ -0.58
TOP3A-201ENST00000321105 SMIM28A0A1B0GU29 152 aa11.4□□□□□ -0.58
TOP3A-201ENST00000321105 GPR182O15218 404 aa11.4□□□□□ -0.58
TOP3A-201ENST00000321105 BUD23O43709 281 aaKnown RBP11.4□□□□□ -0.58
TOP3A-201ENST00000321105 GOT1P17174 413 aa11.4□□□□□ -0.58
TOP3A-201ENST00000321105 HOXD10P28358 340 aa11.4□□□□□ -0.58
TOP3A-201ENST00000321105 PNPLA4P41247 253 aa11.4□□□□□ -0.58
TOP3A-201ENST00000321105 SLC6A3Q01959 620 aa11.4□□□□□ -0.58
TOP3A-201ENST00000321105 USP10Q14694 798 aaKnown RBP11.4□□□□□ -0.58
TOP3A-201ENST00000321105 POU6F1Q14863 301 aa11.4□□□□□ -0.58
TOP3A-201ENST00000321105 PDK1Q15118 436 aa11.4□□□□□ -0.58
TOP3A-201ENST00000321105 LRRC36Q1X8D7 754 aa11.4□□□□□ -0.58
TOP3A-201ENST00000321105 COLGALT1Q8NBJ5 622 aa11.4□□□□□ -0.58
TOP3A-201ENST00000321105 GSDMBQ8TAX9 411 aa11.4□□□□□ -0.58
TOP3A-201ENST00000321105 ERLEC1Q96DZ1 483 aa11.4□□□□□ -0.58
TOP3A-201ENST00000321105 SERPINB12Q96P63 405 aa11.4□□□□□ -0.58
TOP3A-201ENST00000321105 TTC1Q99614 292 aa11.4□□□□□ -0.58
TOP3A-201ENST00000321105 CDHR5Q9HBB8 845 aa11.4□□□□□ -0.58
TOP3A-201ENST00000321105 DDX20Q9UHI6 824 aaKnown RBP11.4□□□□□ -0.58
TOP3A-201ENST00000321105 NWD2Q9ULI1 1742 aa11.4□□□□□ -0.59
TOP3A-201ENST00000321105 MYH7P12883 1935 aa11.4□□□□□ -0.59
TOP3A-201ENST00000321105 ATICP31939 592 aa11.4□□□□□ -0.59
TOP3A-201ENST00000321105 ACADSBP45954 432 aa11.4□□□□□ -0.59
TOP3A-201ENST00000321105 MBTD1Q05BQ5 628 aa11.4□□□□□ -0.59
TOP3A-201ENST00000321105 MCL1Q07820 350 aa11.4□□□□□ -0.59
TOP3A-201ENST00000321105 ZNF235Q14590 738 aa11.4□□□□□ -0.59
TOP3A-201ENST00000321105 EFTUD2Q15029 972 aaKnown RBP eCLIP11.4□□□□□ -0.59
TOP3A-201ENST00000321105 CHI3L2Q15782 390 aa11.4□□□□□ -0.59
TOP3A-201ENST00000321105 KBTBD12Q3ZCT8 623 aa11.4□□□□□ -0.59
TOP3A-201ENST00000321105 KATNAL2Q8IYT4 538 aa11.4□□□□□ -0.59
TOP3A-201ENST00000321105 ARHGAP24Q8N264 748 aa11.4□□□□□ -0.59
TOP3A-201ENST00000321105 GLIS1Q8NBF1 620 aa11.4□□□□□ -0.59
TOP3A-201ENST00000321105 MYH1P12882 1939 aa11.39□□□□□ -0.59
TOP3A-201ENST00000321105 LIASO43766 372 aa11.39□□□□□ -0.59
TOP3A-201ENST00000321105 ADRA1DP25100 572 aa11.39□□□□□ -0.59
TOP3A-201ENST00000321105 NDUFV1P49821 464 aa11.39□□□□□ -0.59
TOP3A-201ENST00000321105 RAD23BP54727 409 aa11.39□□□□□ -0.59
TOP3A-201ENST00000321105 CCL23P55773 120 aa11.39□□□□□ -0.59
TOP3A-201ENST00000321105 AUHQ13825 339 aaKnown RBP11.39□□□□□ -0.59
TOP3A-201ENST00000321105 TAF1BQ53T94 588 aaPredicted RBP11.39□□□□□ -0.59
TOP3A-201ENST00000321105 C1orf220Q5T0J3 134 aa11.39□□□□□ -0.59
TOP3A-201ENST00000321105 ATG16L1Q676U5 607 aa11.39□□□□□ -0.59
TOP3A-201ENST00000321105 PYROXD2Q8N2H3 581 aa11.39□□□□□ -0.59
TOP3A-201ENST00000321105 RAB3IPQ96QF0 476 aaPredicted RBP11.39□□□□□ -0.59
TOP3A-201ENST00000321105 ST6GALNAC4Q9H4F1 302 aa11.39□□□□□ -0.59
TOP3A-201ENST00000321105 ARL2BPQ9Y2Y0 163 aa11.39□□□□□ -0.59
TOP3A-201ENST00000321105 UBR2Q8IWV8 1755 aa11.39□□□□□ -0.59
TOP3A-201ENST00000321105 FSCN2O14926 492 aa11.39□□□□□ -0.59
TOP3A-201ENST00000321105 TRAPPC3O43617 180 aa11.39□□□□□ -0.59
TOP3A-201ENST00000321105 SNRPAP09012 282 aaKnown RBP11.39□□□□□ -0.59
TOP3A-201ENST00000321105 TGM2P21980 687 aa11.39□□□□□ -0.59
TOP3A-201ENST00000321105 GBE1Q04446 702 aa11.39□□□□□ -0.59
TOP3A-201ENST00000321105 NR1H3Q13133 447 aa11.39□□□□□ -0.59
TOP3A-201ENST00000321105 SNX17Q15036 470 aa11.39□□□□□ -0.59
TOP3A-201ENST00000321105 CCDC142Q17RM4 750 aa11.39□□□□□ -0.59
TOP3A-201ENST00000321105 TRIM67Q6ZTA4 783 aa11.39□□□□□ -0.59
TOP3A-201ENST00000321105 PPTC7Q8NI37 304 aa11.39□□□□□ -0.59
TOP3A-201ENST00000321105 FAM161BQ96MY7 647 aa11.39□□□□□ -0.59
TOP3A-201ENST00000321105 FAM167BQ9BTA0 163 aa11.39□□□□□ -0.59
TOP3A-201ENST00000321105 ROPN1BQ9BZX4 212 aaPredicted RBP11.39□□□□□ -0.59
TOP3A-201ENST00000321105 ROPN1Q9HAT0 212 aaPredicted RBP11.39□□□□□ -0.59
TOP3A-201ENST00000321105 BTAF1O14981 1849 aa11.39□□□□□ -0.59
TOP3A-201ENST00000321105 COL16A1Q07092 1604 aaPredicted RBP11.39□□□□□ -0.59
TOP3A-201ENST00000321105 TSPAN1O60635 241 aa11.39□□□□□ -0.59
TOP3A-201ENST00000321105 PRKAR2AP13861 404 aaKnown RBP11.39□□□□□ -0.59
TOP3A-201ENST00000321105 PTPN1P18031 435 aaKnown RBP11.39□□□□□ -0.59
TOP3A-201ENST00000321105 OCRLQ01968 901 aa11.39□□□□□ -0.59
TOP3A-201ENST00000321105 FAAP100Q0VG06 881 aa11.39□□□□□ -0.59
TOP3A-201ENST00000321105 FAM171A1Q5VUB5 890 aa11.39□□□□□ -0.59
TOP3A-201ENST00000321105 C16orf46Q6P387 395 aa11.39□□□□□ -0.59
TOP3A-201ENST00000321105 MON1BQ7L1V2 547 aa11.39□□□□□ -0.59
TOP3A-201ENST00000321105 PHF13Q86YI8 300 aaPredicted RBP11.39□□□□□ -0.59
TOP3A-201ENST00000321105 CDC26Q8NHZ8 85 aa11.39□□□□□ -0.59
TOP3A-201ENST00000321105 LMO3Q8TAP4 145 aa11.39□□□□□ -0.59
TOP3A-201ENST00000321105 TCP10LQ8TDR4 215 aa11.39□□□□□ -0.59
TOP3A-201ENST00000321105 ZC3H15Q8WU90 426 aaKnown RBP11.39□□□□□ -0.59
TOP3A-201ENST00000321105 BORCS6Q96GS4 357 aa11.39□□□□□ -0.59
TOP3A-201ENST00000321105 VPS39Q96JC1 886 aa11.39□□□□□ -0.59
TOP3A-201ENST00000321105 PCDH9Q9HC56 1237 aa11.39□□□□□ -0.59
TOP3A-201ENST00000321105 ACSS2Q9NR19 701 aa11.39□□□□□ -0.59
TOP3A-201ENST00000321105 ARHGEF37A1IGU5 675 aa11.38□□□□□ -0.59
TOP3A-201ENST00000321105 WDR27A2RRH5 827 aa11.38□□□□□ -0.59
TOP3A-201ENST00000321105 TYW5A2RUC4 315 aaKnown RBP11.38□□□□□ -0.59
TOP3A-201ENST00000321105 PRRG1O14668 218 aa11.38□□□□□ -0.59
TOP3A-201ENST00000321105 ICAM3P32942 547 aa11.38□□□□□ -0.59
TOP3A-201ENST00000321105 CSE1LP55060 971 aaKnown RBP11.38□□□□□ -0.59
TOP3A-201ENST00000321105 YWHAHQ04917 246 aaPredicted RBP11.38□□□□□ -0.59
TOP3A-201ENST00000321105 MORF4L2Q15014 288 aa11.38□□□□□ -0.59
TOP3A-201ENST00000321105 CTXN3Q4LDR2 81 aa11.38□□□□□ -0.59
TOP3A-201ENST00000321105 B3GALNT2Q8NCR0 500 aa11.38□□□□□ -0.59
TOP3A-201ENST00000321105 GIPC2Q8TF65 315 aa11.38□□□□□ -0.59
TOP3A-201ENST00000321105 UPF1Q92900 1129 aaKnown RBP eCLIP11.38□□□□□ -0.595e-9■■■■■ 39.4
TOP3A-201ENST00000321105 PTPRN2Q92932 1015 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms