RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 CGRRF1Q99675 332 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 MRPL1Q9BYD6 325 aaKnown RBP4.95□□□□□ -1.62
PTPN13-201ENST00000316707 INO80BQ9C086 356 aaPredicted RBP4.95□□□□□ -1.62
PTPN13-201ENST00000316707 NIF3L1Q9GZT8 377 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 UBIAD1Q9Y5Z9 338 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 SH3PXD2BA1X283 911 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 F8VP50 259 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 CLASP2O75122 1294 aaKnown RBP4.95□□□□□ -1.62
PTPN13-201ENST00000316707 H2AFYO75367 372 aaKnown RBP4.95□□□□□ -1.62
PTPN13-201ENST00000316707 PROCP04070 461 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 ALOX15P16050 662 aaPredicted RBP4.95□□□□□ -1.62
PTPN13-201ENST00000316707 CDH5P33151 784 aaPredicted RBP4.95□□□□□ -1.62
PTPN13-201ENST00000316707 CDK9P50750 372 aaKnown RBP4.95□□□□□ -1.62
PTPN13-201ENST00000316707 MYL6P60660 151 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 Q6ZNX1 250 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 ZNF410Q86VK4 478 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 ABTB1Q969K4 478 aaPredicted RBP4.95□□□□□ -1.62
PTPN13-201ENST00000316707 FAF2Q96CS3 445 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 ZDHHC15Q96MV8 337 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 PRPF18Q99633 342 aaKnown RBP4.95□□□□□ -1.62
PTPN13-201ENST00000316707 RHBDL2Q9NX52 303 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 DNAJC16Q9Y2G8 782 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 STYXL1Q9Y6J8 313 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 A0A087WXM4 84 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 PLIN3O60664 434 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 BAIAP3O94812 1187 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 PGM3O95394 542 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 APOEP02649 317 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 CD97P48960 835 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 RBM5P52756 815 aaKnown RBP eCLIP4.94□□□□□ -1.62
PTPN13-201ENST00000316707 FKBP1AP62942 108 aaKnown RBP4.94□□□□□ -1.62
PTPN13-201ENST00000316707 GHRHRQ02643 423 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 FLOT2Q14254 428 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 PDK2Q15119 407 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 CCDC14Q49A88 953 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 ATP13A4Q4VNC1 1196 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 CCDC92Q53HC0 331 aaPredicted RBP4.94□□□□□ -1.62
PTPN13-201ENST00000316707 SFT2D3Q587I9 215 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 OLFML2BQ68BL8 750 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 APOBEC3HQ6NTF7 200 aaKnown RBP4.94□□□□□ -1.62
PTPN13-201ENST00000316707 BNC2Q6ZN30 1099 aaPredicted RBP4.94□□□□□ -1.62
PTPN13-201ENST00000316707 ZBTB8BQ8NAP8 495 aaPredicted RBP4.94□□□□□ -1.62
PTPN13-201ENST00000316707 TOP1MTQ969P6 601 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 RTP4Q96DX8 246 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 DCUN1D1Q96GG9 259 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 CDHR1Q96JP9 859 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 OSBPL11Q9BXB4 747 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 PNPLA3Q9NST1 481 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 PCDHA10Q9Y5I2 948 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 MYH8P13535 1937 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 CCDC162PA2VCL2 907 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 TISP43B9A030 160 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 E9PBE3 544 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 ZBTB39O15060 712 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 WDR46O15213 610 aaKnown RBP4.94□□□□□ -1.62
PTPN13-201ENST00000316707 USP1O94782 785 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 CDK4P11802 303 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 ME2P23368 584 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 PPIL2Q13356 520 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 DPYSQ14117 519 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 NADK2Q4G0N4 442 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 SYCP2LQ5T4T6 812 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 ANKRD22Q5VYY1 191 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 GRAMD4Q6IC98 578 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 BBS5Q8N3I7 341 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 CMASQ8NFW8 434 aaPredicted RBP4.94□□□□□ -1.62
PTPN13-201ENST00000316707 SPATA18Q8TC71 538 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 SMYD3Q9H7B4 428 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 UBAP1Q9NZ09 502 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 IGSF9Q9P2J2 1179 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 PCDHGC3Q9UN70 934 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 TEX264Q9Y6I9 313 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 A0A0J9YVX5 310 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 SIN3BO75182 1162 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 ZBED1O96006 694 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 APOA4P06727 396 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 RALBP11234 206 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 ITGB5P18084 799 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 NOMO1Q15155 1222 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 POTEHQ6S545 545 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 ILDR2Q71H61 639 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 SATL1Q86VE3 508 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 HACE1Q8IYU2 909 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 SLC4A11Q8NBS3 891 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 LINC00116Q8NCU8 138 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 SGF29Q96ES7 293 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 RMND5BQ96G75 393 aaPredicted RBP4.94□□□□□ -1.62
PTPN13-201ENST00000316707 PRR11Q96HE9 360 aaPredicted RBP4.94□□□□□ -1.62
PTPN13-201ENST00000316707 MCEEQ96PE7 176 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 CCT7Q99832 543 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 FAM213AQ9BRX8 229 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 ZCWPW1Q9H0M4 648 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 SRP68Q9UHB9 627 aaKnown RBP4.94□□□□□ -1.62
PTPN13-201ENST00000316707 TMX2Q9Y320 296 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 CAPN8A6NHC0 703 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 TMEM114B3SHH9 223 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 H7C0C1 242 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 RFPL1O75677 317 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 COX4I1P13073 169 aa4.94□□□□□ -1.62
PTPN13-201ENST00000316707 PSMC3P17980 439 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms