RNA–Protein interactions for RNA: ENST00000310189.3

CTDSPL-202, Transcript of CTD small phosphatase like, humanhuman

TSL 5

Gene CTDSPL, Length 1,482 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-202ENST00000310189 ARL4AP40617 200 aa11.88□□□□□ -0.51
CTDSPL-202ENST00000310189 CDKN2BP42772 138 aa11.88□□□□□ -0.51
CTDSPL-202ENST00000310189 NDUFV1P49821 464 aa11.88□□□□□ -0.51
CTDSPL-202ENST00000310189 DEFB103AP81534 67 aa11.88□□□□□ -0.51
CTDSPL-202ENST00000310189 KRT17Q04695 432 aa11.88□□□□□ -0.51
CTDSPL-202ENST00000310189 ADCY1Q08828 1119 aa11.88□□□□□ -0.51
CTDSPL-202ENST00000310189 GPR17Q13304 367 aa11.88□□□□□ -0.51
CTDSPL-202ENST00000310189 CCDC142Q17RM4 750 aa11.88□□□□□ -0.51
CTDSPL-202ENST00000310189 TMEM240Q5SV17 173 aa11.88□□□□□ -0.51
CTDSPL-202ENST00000310189 BTBD8Q5XKL5 378 aa11.88□□□□□ -0.51
CTDSPL-202ENST00000310189 PM20D1Q6GTS8 502 aa11.88□□□□□ -0.51
CTDSPL-202ENST00000310189 FAM117BQ6P1L5 589 aa11.88□□□□□ -0.51
CTDSPL-202ENST00000310189 EMBQ6PCB8 327 aa11.88□□□□□ -0.51
CTDSPL-202ENST00000310189 NUP93Q8N1F7 819 aa11.88□□□□□ -0.51
CTDSPL-202ENST00000310189 SLC7A14Q8TBB6 771 aa11.88□□□□□ -0.51
CTDSPL-202ENST00000310189 RNF139Q8WU17 664 aa11.88□□□□□ -0.51
CTDSPL-202ENST00000310189 C1orf54Q8WWF1 131 aa11.88□□□□□ -0.51
CTDSPL-202ENST00000310189 RAPGEF5Q92565 580 aa11.88□□□□□ -0.51
CTDSPL-202ENST00000310189 KHSRPQ92945 711 aaKnown RBP eCLIP11.88□□□□□ -0.51
CTDSPL-202ENST00000310189 RNF34Q969K3 372 aa11.88□□□□□ -0.51
CTDSPL-202ENST00000310189 IGSF21Q96ID5 467 aa11.88□□□□□ -0.51
CTDSPL-202ENST00000310189 SLC2A13Q96QE2 648 aa11.88□□□□□ -0.51
CTDSPL-202ENST00000310189 TMEM209Q96SK2 561 aa11.88□□□□□ -0.51
CTDSPL-202ENST00000310189 SLC9A7Q96T83 725 aa11.88□□□□□ -0.51
CTDSPL-202ENST00000310189 ERP44Q9BS26 406 aa11.88□□□□□ -0.51
CTDSPL-202ENST00000310189 DCLK3Q9C098 648 aa11.88□□□□□ -0.51
CTDSPL-202ENST00000310189 FAM204AQ9H8W3 233 aa11.88□□□□□ -0.51
CTDSPL-202ENST00000310189 GDF3Q9NR23 364 aa11.88□□□□□ -0.51
CTDSPL-202ENST00000310189 TMLHEQ9NVH6 421 aa11.88□□□□□ -0.51
CTDSPL-202ENST00000310189 COMMD8Q9NX08 183 aa11.88□□□□□ -0.51
CTDSPL-202ENST00000310189 MARCH5Q9NX47 278 aa11.88□□□□□ -0.51
CTDSPL-202ENST00000310189 SPG21Q9NZD8 308 aa11.88□□□□□ -0.51
CTDSPL-202ENST00000310189 DMGDHQ9UI17 866 aaKnown RBP11.88□□□□□ -0.51
CTDSPL-202ENST00000310189 ZNF487B1APH4 448 aa11.87□□□□□ -0.51
CTDSPL-202ENST00000310189 ZMYND10O75800 440 aa11.87□□□□□ -0.51
CTDSPL-202ENST00000310189 OR4Q2P0C623 313 aa11.87□□□□□ -0.51
CTDSPL-202ENST00000310189 TCF4P15884 667 aa11.87□□□□□ -0.51
CTDSPL-202ENST00000310189 IL1R2P27930 398 aa11.87□□□□□ -0.51
CTDSPL-202ENST00000310189 MAGEA10P43363 369 aaPredicted RBP11.87□□□□□ -0.51
CTDSPL-202ENST00000310189 CREMQ03060 361 aa11.87□□□□□ -0.51
CTDSPL-202ENST00000310189 IFRD2Q12894 506 aaPredicted RBP11.87□□□□□ -0.51
CTDSPL-202ENST00000310189 CALCOCO2Q13137 446 aa11.87□□□□□ -0.51
CTDSPL-202ENST00000310189 NME3Q13232 169 aa11.87□□□□□ -0.51
CTDSPL-202ENST00000310189 SNX1Q13596 522 aa11.87□□□□□ -0.51
CTDSPL-202ENST00000310189 LLGL1Q15334 1064 aa11.87□□□□□ -0.51
CTDSPL-202ENST00000310189 PSMD5Q16401 504 aa11.87□□□□□ -0.51
CTDSPL-202ENST00000310189 EFHC2Q5JST6 749 aa11.87□□□□□ -0.51
CTDSPL-202ENST00000310189 BZW1Q7L1Q6 419 aaKnown RBP11.87□□□□□ -0.51
CTDSPL-202ENST00000310189 BEND5Q7L4P6 421 aa11.87□□□□□ -0.51
CTDSPL-202ENST00000310189 JAMLQ86YT9 394 aa11.87□□□□□ -0.51
CTDSPL-202ENST00000310189 ARFGAP1Q8N6T3 406 aa11.87□□□□□ -0.51
CTDSPL-202ENST00000310189 BBOF1Q8ND07 529 aa11.87□□□□□ -0.51
CTDSPL-202ENST00000310189 ZMIZ2Q8NF64 920 aa11.87□□□□□ -0.51
CTDSPL-202ENST00000310189 RIN2Q8WYP3 895 aaPredicted RBP11.87□□□□□ -0.51
CTDSPL-202ENST00000310189 HAUS1Q96CS2 278 aa11.87□□□□□ -0.51
CTDSPL-202ENST00000310189 ZNF689Q96CS4 500 aaPredicted RBP11.87□□□□□ -0.51
CTDSPL-202ENST00000310189 CEP295NLQ96MC4 621 aa11.87□□□□□ -0.51
CTDSPL-202ENST00000310189 FERMT1Q9BQL6 677 aa11.87□□□□□ -0.51
CTDSPL-202ENST00000310189 RHOBTB2Q9BYZ6 727 aa11.87□□□□□ -0.51
CTDSPL-202ENST00000310189 FAM129AQ9BZQ8 928 aa11.87□□□□□ -0.51
CTDSPL-202ENST00000310189 DHX35Q9H5Z1 703 aaKnown RBP11.87□□□□□ -0.51
CTDSPL-202ENST00000310189 CWH43Q9H720 699 aa11.87□□□□□ -0.51
CTDSPL-202ENST00000310189 ZNF148Q9UQR1 794 aa11.87□□□□□ -0.51
CTDSPL-202ENST00000310189 SSX2IPQ9Y2D8 614 aa11.87□□□□□ -0.51
CTDSPL-202ENST00000310189 SYNJ2BP-COX16A0A087WUM0 186 aa11.86□□□□□ -0.51
CTDSPL-202ENST00000310189 YJEFN3A6XGL0 299 aa11.86□□□□□ -0.51
CTDSPL-202ENST00000310189 HHLA1C9JL84 531 aa11.86□□□□□ -0.51
CTDSPL-202ENST00000310189 E7ENQ6 273 aa11.86□□□□□ -0.51
CTDSPL-202ENST00000310189 MCF2LO15068 1137 aa11.86□□□□□ -0.51
CTDSPL-202ENST00000310189 CST8O60676 142 aa11.86□□□□□ -0.51
CTDSPL-202ENST00000310189 ENDOD1O94919 500 aa11.86□□□□□ -0.51
CTDSPL-202ENST00000310189 SOD2P04179 222 aa11.86□□□□□ -0.51
CTDSPL-202ENST00000310189 URODP06132 367 aa11.86□□□□□ -0.51
CTDSPL-202ENST00000310189 KRT10P13645 584 aa11.86□□□□□ -0.51
CTDSPL-202ENST00000310189 TUFMP49411 452 aaKnown RBP11.86□□□□□ -0.51
CTDSPL-202ENST00000310189 GLUD2P49448 558 aa11.86□□□□□ -0.51
CTDSPL-202ENST00000310189 PSEN1P49768 467 aa11.86□□□□□ -0.51
CTDSPL-202ENST00000310189 CDR1P51861 262 aa11.86□□□□□ -0.51
CTDSPL-202ENST00000310189 ZNF135P52742 658 aaPredicted RBP11.86□□□□□ -0.51
CTDSPL-202ENST00000310189 SLC5A3P53794 718 aa11.86□□□□□ -0.51
CTDSPL-202ENST00000310189 HDAC4P56524 1084 aa11.86□□□□□ -0.51
CTDSPL-202ENST00000310189 YWHAGP61981 247 aaKnown RBP eCLIP11.86□□□□□ -0.51
CTDSPL-202ENST00000310189 MRPS25P82663 173 aaKnown RBP11.86□□□□□ -0.51
CTDSPL-202ENST00000310189 KLF1Q13351 362 aaPredicted RBP11.86□□□□□ -0.51
CTDSPL-202ENST00000310189 NNTQ13423 1086 aa11.86□□□□□ -0.51
CTDSPL-202ENST00000310189 BYSLQ13895 437 aaKnown RBP11.86□□□□□ -0.51
CTDSPL-202ENST00000310189 MGAT5BQ3V5L5 792 aa11.86□□□□□ -0.51
CTDSPL-202ENST00000310189 PPP6R3Q5H9R7 873 aaPredicted RBP11.86□□□□□ -0.51
CTDSPL-202ENST00000310189 SH3PXD2AQ5TCZ1 1133 aa11.86□□□□□ -0.51
CTDSPL-202ENST00000310189 BSPRYQ5W0U4 402 aa11.86□□□□□ -0.51
CTDSPL-202ENST00000310189 TXNRD3NBQ6F5E7 133 aa11.86□□□□□ -0.51
CTDSPL-202ENST00000310189 BBS12Q6ZW61 710 aa11.86□□□□□ -0.51
CTDSPL-202ENST00000310189 MON1AQ86VX9 555 aa11.86□□□□□ -0.51
CTDSPL-202ENST00000310189 FIBCD1Q8N539 461 aa11.86□□□□□ -0.51
CTDSPL-202ENST00000310189 CCDC89Q8N998 374 aa11.86□□□□□ -0.51
CTDSPL-202ENST00000310189 FBXO22Q8NEZ5 403 aa11.86□□□□□ -0.51
CTDSPL-202ENST00000310189 HDAC7Q8WUI4 952 aa11.86□□□□□ -0.51
CTDSPL-202ENST00000310189 PIK3R5Q8WYR1 880 aa11.86□□□□□ -0.51
CTDSPL-202ENST00000310189 HERVK_113Q902F9 699 aa11.86□□□□□ -0.51
CTDSPL-202ENST00000310189 P3H4Q92791 437 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms