RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 NPM3O75607 178 aaKnown RBP11.56□□□□□ -0.56
PTPN7-201ENST00000309017 TRPA1O75762 1119 aa11.56□□□□□ -0.56
PTPN7-201ENST00000309017 KLHL2O95198 593 aa11.56□□□□□ -0.56
PTPN7-201ENST00000309017 ASNSP08243 561 aa11.56□□□□□ -0.56
PTPN7-201ENST00000309017 VAV1P15498 845 aa11.56□□□□□ -0.56
PTPN7-201ENST00000309017 RAP1GAPP47736 663 aa11.56□□□□□ -0.56
PTPN7-201ENST00000309017 BCAR1P56945 870 aa11.56□□□□□ -0.56
PTPN7-201ENST00000309017 YWHAEP62258 255 aaKnown RBP11.56□□□□□ -0.56
PTPN7-201ENST00000309017 DLG1Q12959 904 aa11.56□□□□□ -0.56
PTPN7-201ENST00000309017 PDK3Q15120 406 aa11.56□□□□□ -0.56
PTPN7-201ENST00000309017 NAT14Q8WUY8 206 aa11.56□□□□□ -0.56
PTPN7-201ENST00000309017 THAP1Q9NVV9 213 aa11.56□□□□□ -0.56
PTPN7-201ENST00000309017 UQCRBP14927 111 aa11.55□□□□□ -0.56
PTPN7-201ENST00000309017 VCLP18206 1134 aa11.55□□□□□ -0.56
PTPN7-201ENST00000309017 TNFSF9P41273 254 aa11.55□□□□□ -0.56
PTPN7-201ENST00000309017 R3HDM1Q15032 1099 aaKnown RBP11.55□□□□□ -0.56
PTPN7-201ENST00000309017 ANGEL2Q5VTE6 544 aaKnown RBP11.55□□□□□ -0.56
PTPN7-201ENST00000309017 FAM172AQ8WUF8 416 aa11.55□□□□□ -0.56
PTPN7-201ENST00000309017 ZNF668Q96K58 619 aaPredicted RBP11.55□□□□□ -0.56
PTPN7-201ENST00000309017 GPATCH2LQ9NWQ4 482 aa11.55□□□□□ -0.56
PTPN7-201ENST00000309017 RHBDL2Q9NX52 303 aa11.55□□□□□ -0.56
PTPN7-201ENST00000309017 TEX264Q9Y6I9 313 aa11.55□□□□□ -0.56
PTPN7-201ENST00000309017 FOCADQ5VW36 1801 aa11.55□□□□□ -0.56
PTPN7-201ENST00000309017 KLF11O14901 512 aa11.55□□□□□ -0.56
PTPN7-201ENST00000309017 OR6B1O95007 311 aa11.55□□□□□ -0.56
PTPN7-201ENST00000309017 BPGMP07738 259 aa11.55□□□□□ -0.56
PTPN7-201ENST00000309017 TSHRP16473 764 aa11.55□□□□□ -0.56
PTPN7-201ENST00000309017 PTPN7P35236 360 aa11.55□□□□□ -0.56
PTPN7-201ENST00000309017 ATXN3P54252 364 aaPredicted RBP11.55□□□□□ -0.56
PTPN7-201ENST00000309017 YWHAZP63104 245 aaKnown RBP11.55□□□□□ -0.56
PTPN7-201ENST00000309017 USP4Q13107 963 aa11.55□□□□□ -0.56
PTPN7-201ENST00000309017 TMCO4Q5TGY1 634 aa11.55□□□□□ -0.56
PTPN7-201ENST00000309017 OR6B2Q6IFH4 312 aa11.55□□□□□ -0.56
PTPN7-201ENST00000309017 ABTB1Q969K4 478 aaPredicted RBP11.55□□□□□ -0.56
PTPN7-201ENST00000309017 ZNF518BQ9C0D4 1074 aa11.55□□□□□ -0.56
PTPN7-201ENST00000309017 RNF146Q9NTX7 359 aa11.55□□□□□ -0.56
PTPN7-201ENST00000309017 ETNK2Q9NVF9 386 aa11.55□□□□□ -0.56
PTPN7-201ENST00000309017 ASNSD1Q9NWL6 643 aa11.55□□□□□ -0.56
PTPN7-201ENST00000309017 DTNAQ9Y4J8 743 aa11.55□□□□□ -0.56
PTPN7-201ENST00000309017 SORBS2O94875 1100 aaKnown RBP11.55□□□□□ -0.56
PTPN7-201ENST00000309017 MMP10P09238 476 aa11.55□□□□□ -0.56
PTPN7-201ENST00000309017 EIF4BP23588 611 aaKnown RBP11.55□□□□□ -0.56
PTPN7-201ENST00000309017 SLC25A11Q02978 314 aaKnown RBP11.55□□□□□ -0.56
PTPN7-201ENST00000309017 BTKQ06187 659 aa11.55□□□□□ -0.56
PTPN7-201ENST00000309017 CNGA3Q16281 694 aa11.55□□□□□ -0.56
PTPN7-201ENST00000309017 DUOXA2Q1HG44 320 aa11.55□□□□□ -0.56
PTPN7-201ENST00000309017 SH2D4BQ5SQS7 431 aa11.55□□□□□ -0.56
PTPN7-201ENST00000309017 MAP3K21Q5TCX8 1036 aa11.55□□□□□ -0.56
PTPN7-201ENST00000309017 MAP7D3Q8IWC1 876 aa11.55□□□□□ -0.56
PTPN7-201ENST00000309017 PIWIL2Q8TC59 973 aaKnown RBP11.55□□□□□ -0.56
PTPN7-201ENST00000309017 Q9H521 79 aa11.55□□□□□ -0.56
PTPN7-201ENST00000309017 QTRT2Q9H974 415 aaKnown RBP11.55□□□□□ -0.56
PTPN7-201ENST00000309017 DDX18Q9NVP1 670 aaKnown RBP11.55□□□□□ -0.56
PTPN7-201ENST00000309017 DDX43Q9NXZ2 648 aaKnown RBP11.55□□□□□ -0.56
PTPN7-201ENST00000309017 CNTN3Q9P232 1028 aa11.55□□□□□ -0.56
PTPN7-201ENST00000309017 ZNF70Q9UC06 446 aaPredicted RBP11.55□□□□□ -0.56
PTPN7-201ENST00000309017 TELO2Q9Y4R8 837 aa11.55□□□□□ -0.56
PTPN7-201ENST00000309017 ZNF536O15090 1300 aa11.55□□□□□ -0.56
PTPN7-201ENST00000309017 ZNFX1Q9P2E3 1918 aaKnown RBP11.55□□□□□ -0.56
PTPN7-201ENST00000309017 MED7O43513 233 aa11.54□□□□□ -0.56
PTPN7-201ENST00000309017 TNNC2P02585 160 aa11.54□□□□□ -0.56
PTPN7-201ENST00000309017 APOEP02649 317 aa11.54□□□□□ -0.56
PTPN7-201ENST00000309017 SRGAP2CP0DJJ0 459 aa11.54□□□□□ -0.56
PTPN7-201ENST00000309017 RBL1P28749 1068 aa11.54□□□□□ -0.56
PTPN7-201ENST00000309017 ACTR2P61160 394 aa11.54□□□□□ -0.56
PTPN7-201ENST00000309017 COG7P83436 770 aa11.54□□□□□ -0.56
PTPN7-201ENST00000309017 CCDC142Q17RM4 750 aa11.54□□□□□ -0.56
PTPN7-201ENST00000309017 XKR3Q5GH77 459 aa11.54□□□□□ -0.56
PTPN7-201ENST00000309017 HPS6Q86YV9 775 aa11.54□□□□□ -0.56
PTPN7-201ENST00000309017 CEP70Q8NHQ1 597 aa11.54□□□□□ -0.56
PTPN7-201ENST00000309017 FAM151AQ8WW52 585 aa11.54□□□□□ -0.56
PTPN7-201ENST00000309017 ATXN10Q9UBB4 475 aa11.54□□□□□ -0.56
PTPN7-201ENST00000309017 STRCQ7RTU9 1775 aa11.54□□□□□ -0.56
PTPN7-201ENST00000309017 WNK3Q9BYP7 1800 aa11.54□□□□□ -0.56
PTPN7-201ENST00000309017 CAPN8A6NHC0 703 aa11.54□□□□□ -0.56
PTPN7-201ENST00000309017 M0QYV0 167 aa11.54□□□□□ -0.56
PTPN7-201ENST00000309017 CFLARO15519 480 aa11.54□□□□□ -0.56
PTPN7-201ENST00000309017 ASS1P00966 412 aaKnown RBP11.54□□□□□ -0.56
PTPN7-201ENST00000309017 CSH1P0DML2 217 aa11.54□□□□□ -0.56
PTPN7-201ENST00000309017 CSH2P0DML3 217 aa11.54□□□□□ -0.56
PTPN7-201ENST00000309017 ABCD1P33897 745 aa11.54□□□□□ -0.56
PTPN7-201ENST00000309017 PTGER2P43116 358 aa11.54□□□□□ -0.56
PTPN7-201ENST00000309017 SLC1A6P48664 564 aa11.54□□□□□ -0.56
PTPN7-201ENST00000309017 MRPS5P82675 430 aaKnown RBP11.54□□□□□ -0.56
PTPN7-201ENST00000309017 TBL3Q12788 808 aaKnown RBP11.54□□□□□ -0.56
PTPN7-201ENST00000309017 AAGABQ6PD74 315 aa11.54□□□□□ -0.56
PTPN7-201ENST00000309017 TRMT10BQ6PF06 316 aaKnown RBP11.54□□□□□ -0.56
PTPN7-201ENST00000309017 PDSS2Q86YH6 399 aa11.54□□□□□ -0.56
PTPN7-201ENST00000309017 SEPT12Q8IYM1 358 aa11.54□□□□□ -0.56
PTPN7-201ENST00000309017 DNAJC1Q96KC8 554 aaKnown RBP11.54□□□□□ -0.56
PTPN7-201ENST00000309017 PPP1R36Q96LQ0 422 aa11.54□□□□□ -0.56
PTPN7-201ENST00000309017 LRGUKQ96M69 825 aa11.54□□□□□ -0.56
PTPN7-201ENST00000309017 CCDC106Q9BWC9 280 aa11.54□□□□□ -0.56
PTPN7-201ENST00000309017 OCEL1Q9H607 264 aa11.54□□□□□ -0.56
PTPN7-201ENST00000309017 PLA2G4CQ9UP65 541 aa11.54□□□□□ -0.56
PTPN7-201ENST00000309017 EFR3BQ9Y2G0 817 aa11.54□□□□□ -0.56
PTPN7-201ENST00000309017 TTLL3Q9Y4R7 772 aa11.54□□□□□ -0.56
PTPN7-201ENST00000309017 A0A088AWK7 358 aa11.54□□□□□ -0.56
PTPN7-201ENST00000309017 HNRNPRO43390 633 aaKnown RBP11.54□□□□□ -0.56
PTPN7-201ENST00000309017 CHN2P52757 468 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 151.6 ms