RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 EXOC1Q9NV70 894 aa5.28□□□□□ -1.56
CKS1B-201ENST00000308987 TAB2Q9NYJ8 693 aa5.28□□□□□ -1.56
CKS1B-201ENST00000308987 VPS18Q9P253 973 aa5.28□□□□□ -1.56
CKS1B-201ENST00000308987 REXO2Q9Y3B8 237 aaKnown RBP5.28□□□□□ -1.56
CKS1B-201ENST00000308987 JRKLQ9Y4A0 524 aa5.28□□□□□ -1.56
CKS1B-201ENST00000308987 PCDHA1Q9Y5I3 950 aa5.28□□□□□ -1.56
CKS1B-201ENST00000308987 MRPL42Q9Y6G3 142 aaKnown RBP5.28□□□□□ -1.56
CKS1B-201ENST00000308987 LAMA1P25391 3075 aa5.28□□□□□ -1.56
CKS1B-201ENST00000308987 GPR179Q6PRD1 2367 aa5.28□□□□□ -1.56
CKS1B-201ENST00000308987 ADGRA3Q8IWK6 1321 aa5.27□□□□□ -1.57
CKS1B-201ENST00000308987 CCDC194A0A1B0GVG4 234 aa5.27□□□□□ -1.57
CKS1B-201ENST00000308987 GSTTP1A0A1W2PQM5 241 aa5.27□□□□□ -1.57
CKS1B-201ENST00000308987 ESYT2A0FGR8 921 aa5.27□□□□□ -1.57
CKS1B-201ENST00000308987 SRRM3A6NNA2 597 aaPredicted RBP5.27□□□□□ -1.57
CKS1B-201ENST00000308987 LOC730098B7Z3J9 87 aa5.27□□□□□ -1.57
CKS1B-201ENST00000308987 MYO1CO00159 1063 aa5.27□□□□□ -1.57
CKS1B-201ENST00000308987 ZBTB5O15062 677 aa5.27□□□□□ -1.57
CKS1B-201ENST00000308987 PJA2O43164 708 aa5.27□□□□□ -1.57
CKS1B-201ENST00000308987 TACC1O75410 805 aa5.27□□□□□ -1.57
CKS1B-201ENST00000308987 DGKIO75912 1065 aa5.27□□□□□ -1.57
CKS1B-201ENST00000308987 PRPF6O94906 941 aaKnown RBP5.27□□□□□ -1.57
CKS1B-201ENST00000308987 EYA4O95677 639 aa5.27□□□□□ -1.57
CKS1B-201ENST00000308987 ITGB1P05556 798 aa5.27□□□□□ -1.57
CKS1B-201ENST00000308987 RHOXF2BP0C7M4 288 aa5.27□□□□□ -1.57
CKS1B-201ENST00000308987 ARP10275 920 aa5.27□□□□□ -1.57
CKS1B-201ENST00000308987 TGFB3P10600 412 aa5.27□□□□□ -1.57
CKS1B-201ENST00000308987 EPB41P11171 864 aaKnown RBP5.27□□□□□ -1.57
CKS1B-201ENST00000308987 TCP1P17987 556 aaKnown RBP5.27□□□□□ -1.57
CKS1B-201ENST00000308987 TACR1P25103 407 aa5.27□□□□□ -1.57
CKS1B-201ENST00000308987 CCND2P30279 289 aa5.27□□□□□ -1.57
CKS1B-201ENST00000308987 MCM7P33993 719 aa5.27□□□□□ -1.57
CKS1B-201ENST00000308987 MAGEA9P43362 315 aa5.27□□□□□ -1.57
CKS1B-201ENST00000308987 VAV2P52735 878 aa5.27□□□□□ -1.57
CKS1B-201ENST00000308987 VCPP55072 806 aaKnown RBP5.27□□□□□ -1.57
CKS1B-201ENST00000308987 APBA1Q02410 837 aa5.27□□□□□ -1.57
CKS1B-201ENST00000308987 KIF5AQ12840 1032 aa5.27□□□□□ -1.57
CKS1B-201ENST00000308987 SMAD4Q13485 552 aaKnown RBP5.27□□□□□ -1.57
CKS1B-201ENST00000308987 IL17AQ16552 155 aa5.27□□□□□ -1.57
CKS1B-201ENST00000308987 PTPN21Q16825 1174 aa5.27□□□□□ -1.57
CKS1B-201ENST00000308987 PTPROQ16827 1216 aa5.27□□□□□ -1.57
CKS1B-201ENST00000308987 SEZ6Q53EL9 994 aa5.27□□□□□ -1.57
CKS1B-201ENST00000308987 NAALADL2Q58DX5 795 aa5.27□□□□□ -1.57
CKS1B-201ENST00000308987 FBXO47Q5MNV8 452 aa5.27□□□□□ -1.57
CKS1B-201ENST00000308987 FKBP15Q5T1M5 1219 aa5.27□□□□□ -1.57
CKS1B-201ENST00000308987 ALS2CLQ60I27 953 aa5.27□□□□□ -1.57
CKS1B-201ENST00000308987 CENPPQ6IPU0 288 aa5.27□□□□□ -1.57
CKS1B-201ENST00000308987 CRIP3Q6Q6R5 217 aa5.27□□□□□ -1.57
CKS1B-201ENST00000308987 PAQR3Q6TCH7 311 aa5.27□□□□□ -1.57
CKS1B-201ENST00000308987 METTL7BQ6UX53 244 aa5.27□□□□□ -1.57
CKS1B-201ENST00000308987 PIK3AP1Q6ZUJ8 805 aa5.27□□□□□ -1.57
CKS1B-201ENST00000308987 NLRC3Q7RTR2 1065 aa5.27□□□□□ -1.57
CKS1B-201ENST00000308987 KIAA1328Q86T90 577 aa5.27□□□□□ -1.57
CKS1B-201ENST00000308987 FIBCD1Q8N539 461 aa5.27□□□□□ -1.57
CKS1B-201ENST00000308987 RNF10Q8N5U6 811 aaKnown RBP5.27□□□□□ -1.57
CKS1B-201ENST00000308987 EIF1ADQ8N9N8 165 aaKnown RBP5.27□□□□□ -1.57
CKS1B-201ENST00000308987 NOA1Q8NC60 698 aaKnown RBP5.27□□□□□ -1.57
CKS1B-201ENST00000308987 SPPL3Q8TCT6 385 aa5.27□□□□□ -1.57
CKS1B-201ENST00000308987 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.27□□□□□ -1.57
CKS1B-201ENST00000308987 EDAQ92838 391 aa5.27□□□□□ -1.57
CKS1B-201ENST00000308987 DVL3Q92997 716 aaPredicted RBP5.27□□□□□ -1.57
CKS1B-201ENST00000308987 P2RX5Q93086 422 aa5.27□□□□□ -1.57
CKS1B-201ENST00000308987 JAKMIP2Q96AA8 810 aa5.27□□□□□ -1.57
CKS1B-201ENST00000308987 SNX27Q96L92 541 aa5.27□□□□□ -1.57
CKS1B-201ENST00000308987 SLC6A18Q96N87 628 aa5.27□□□□□ -1.57
CKS1B-201ENST00000308987 PCYT2Q99447 389 aa5.27□□□□□ -1.57
CKS1B-201ENST00000308987 CHP1Q99653 195 aa5.27□□□□□ -1.57
CKS1B-201ENST00000308987 RHOXF2Q9BQY4 288 aa5.27□□□□□ -1.57
CKS1B-201ENST00000308987 TUBGCP2Q9BSJ2 902 aa5.27□□□□□ -1.57
CKS1B-201ENST00000308987 CRACR2AQ9BSW2 395 aa5.27□□□□□ -1.57
CKS1B-201ENST00000308987 RSRP1Q9BUV0 290 aa5.27□□□□□ -1.57
CKS1B-201ENST00000308987 SPZ1Q9BXG8 430 aa5.27□□□□□ -1.57
CKS1B-201ENST00000308987 BLZF1Q9H2G9 400 aa5.27□□□□□ -1.57
CKS1B-201ENST00000308987 ZSWIM4Q9H7M6 989 aa5.27□□□□□ -1.57
CKS1B-201ENST00000308987 MLXIPQ9HAP2 919 aa5.27□□□□□ -1.57
CKS1B-201ENST00000308987 BARHL2Q9NY43 387 aa5.27□□□□□ -1.57
CKS1B-201ENST00000308987 HPCAL4Q9UM19 191 aa5.27□□□□□ -1.57
CKS1B-201ENST00000308987 GUCA1BQ9UMX6 200 aa5.27□□□□□ -1.57
CKS1B-201ENST00000308987 RRP15Q9Y3B9 282 aaKnown RBP5.27□□□□□ -1.57
CKS1B-201ENST00000308987 MTCL1Q9Y4B5 1905 aaKnown RBP5.27□□□□□ -1.57
CKS1B-201ENST00000308987 KMT2BQ9UMN6 2715 aaPredicted RBP5.26□□□□□ -1.57
CKS1B-201ENST00000308987 MBLAC1A4D2B0 266 aaPredicted RBP5.26□□□□□ -1.57
CKS1B-201ENST00000308987 TMEM221A6NGB7 291 aa5.26□□□□□ -1.57
CKS1B-201ENST00000308987 LRRIQ3A6PVS8 624 aaPredicted RBP5.26□□□□□ -1.57
CKS1B-201ENST00000308987 GOLGA8KD6RF30 607 aa5.26□□□□□ -1.57
CKS1B-201ENST00000308987 GCOM1H8Y6P7 765 aaPredicted RBP5.26□□□□□ -1.57
CKS1B-201ENST00000308987 M0R296 226 aa5.26□□□□□ -1.57
CKS1B-201ENST00000308987 STXBP3O00186 592 aa5.26□□□□□ -1.57
CKS1B-201ENST00000308987 MEIS2O14770 477 aa5.26□□□□□ -1.57
CKS1B-201ENST00000308987 OPA1O60313 960 aa5.26□□□□□ -1.57
CKS1B-201ENST00000308987 MGEA5O60502 916 aa5.26□□□□□ -1.57
CKS1B-201ENST00000308987 CAND2O75155 1236 aa5.26□□□□□ -1.57
CKS1B-201ENST00000308987 CPP00450 1065 aa5.26□□□□□ -1.57
CKS1B-201ENST00000308987 PLATP00750 562 aa5.26□□□□□ -1.57
CKS1B-201ENST00000308987 PDGFBP01127 241 aaPredicted RBP5.26□□□□□ -1.57
CKS1B-201ENST00000308987 CYBBP04839 570 aa5.26□□□□□ -1.57
CKS1B-201ENST00000308987 RB1P06400 928 aa5.26□□□□□ -1.57
CKS1B-201ENST00000308987 POLR2MP0CAP2 368 aa5.26□□□□□ -1.57
CKS1B-201ENST00000308987 KCNA2P16389 499 aa5.26□□□□□ -1.57
CKS1B-201ENST00000308987 CASP1P29466 404 aa5.26□□□□□ -1.57
CKS1B-201ENST00000308987 GNA11P29992 359 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms