RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 RPLP0P6Q8NHW5 317 aa20.87■□□□□ 0.93
PDZRN3-202ENST00000308537 USP33Q8TEY7 942 aa20.87■□□□□ 0.93
PDZRN3-202ENST00000308537 SRRTQ9BXP5 876 aaKnown RBP20.87■□□□□ 0.93
PDZRN3-202ENST00000308537 CLIC5Q9NZA1 410 aa20.87■□□□□ 0.93
PDZRN3-202ENST00000308537 CCDC163A0A0D9SF12 145 aa20.86■□□□□ 0.93
PDZRN3-202ENST00000308537 HOXC11O43248 304 aaPredicted RBP20.86■□□□□ 0.93
PDZRN3-202ENST00000308537 ADH5P11766 374 aa20.86■□□□□ 0.93
PDZRN3-202ENST00000308537 TBXAS1P24557 533 aaPredicted RBP20.86■□□□□ 0.93
PDZRN3-202ENST00000308537 ATP5C1P36542 298 aaKnown RBP20.86■□□□□ 0.93
PDZRN3-202ENST00000308537 PXNP49023 591 aaPredicted RBP20.86■□□□□ 0.93
PDZRN3-202ENST00000308537 ZNF132P52740 706 aa20.86■□□□□ 0.93
PDZRN3-202ENST00000308537 KCNH2Q12809 1159 aa20.86■□□□□ 0.93
PDZRN3-202ENST00000308537 GOLGA7BQ2TAP0 167 aa20.86■□□□□ 0.93
PDZRN3-202ENST00000308537 HEATR6Q6AI08 1181 aaKnown RBP20.86■□□□□ 0.93
PDZRN3-202ENST00000308537 PM20D1Q6GTS8 502 aa20.86■□□□□ 0.93
PDZRN3-202ENST00000308537 CLEC17AQ6ZS10 378 aa20.86■□□□□ 0.93
PDZRN3-202ENST00000308537 TMEM25Q86YD3 366 aa20.86■□□□□ 0.93
PDZRN3-202ENST00000308537 KREMEN1Q96MU8 473 aa20.86■□□□□ 0.93
PDZRN3-202ENST00000308537 HCN2Q9UL51 889 aa20.86■□□□□ 0.93
PDZRN3-202ENST00000308537 ATG13O75143 517 aa20.85■□□□□ 0.93
PDZRN3-202ENST00000308537 IRF1P10914 325 aa20.85■□□□□ 0.93
PDZRN3-202ENST00000308537 HNRNPLP14866 589 aaKnown RBP eCLIP20.85■□□□□ 0.93
PDZRN3-202ENST00000308537 PSEN1P49768 467 aa20.85■□□□□ 0.93
PDZRN3-202ENST00000308537 SGO2Q562F6 1265 aa20.85■□□□□ 0.93
PDZRN3-202ENST00000308537 EHBP1Q8NDI1 1231 aa20.85■□□□□ 0.93
PDZRN3-202ENST00000308537 NT5C1BQ96P26 610 aa20.85■□□□□ 0.93
PDZRN3-202ENST00000308537 PARD6AQ9NPB6 346 aa20.85■□□□□ 0.93
PDZRN3-202ENST00000308537 SPHK2Q9NRA0 654 aa20.85■□□□□ 0.93
PDZRN3-202ENST00000308537 NAGPAQ9UK23 515 aa20.85■□□□□ 0.93
PDZRN3-202ENST00000308537 SH3BP1Q9Y3L3 701 aa20.85■□□□□ 0.93
PDZRN3-202ENST00000308537 RALGAPA1Q6GYQ0 2036 aa20.85■□□□□ 0.93
PDZRN3-202ENST00000308537 XPO1O14980 1071 aaKnown RBP20.84■□□□□ 0.93
PDZRN3-202ENST00000308537 GNA14O95837 355 aa20.84■□□□□ 0.93
PDZRN3-202ENST00000308537 ADH1CP00326 375 aa20.84■□□□□ 0.93
PDZRN3-202ENST00000308537 CALCAP01258 141 aa20.84■□□□□ 0.93
PDZRN3-202ENST00000308537 KLKB1P03952 638 aa20.84■□□□□ 0.93
PDZRN3-202ENST00000308537 VDRP11473 427 aa20.84■□□□□ 0.93
PDZRN3-202ENST00000308537 CNR2P34972 360 aa20.84■□□□□ 0.93
PDZRN3-202ENST00000308537 KIR2DL1P43626 348 aaPredicted RBP20.84■□□□□ 0.93
PDZRN3-202ENST00000308537 PLA2G4AP47712 749 aa20.84■□□□□ 0.93
PDZRN3-202ENST00000308537 BCAT1P54687 386 aa20.84■□□□□ 0.93
PDZRN3-202ENST00000308537 GCNT1Q02742 428 aa20.84■□□□□ 0.93
PDZRN3-202ENST00000308537 LPAL2Q16609 132 aa20.84■□□□□ 0.93
PDZRN3-202ENST00000308537 CAMKK1Q8N5S9 505 aa20.84■□□□□ 0.93
PDZRN3-202ENST00000308537 NDRG1Q92597 394 aaKnown RBP20.84■□□□□ 0.93
PDZRN3-202ENST00000308537 HHIPQ96QV1 700 aa20.84■□□□□ 0.93
PDZRN3-202ENST00000308537 RWDD2AQ9UIY3 292 aa20.84■□□□□ 0.93
PDZRN3-202ENST00000308537 CNTN6Q9UQ52 1028 aa20.84■□□□□ 0.93
PDZRN3-202ENST00000308537 ABCA7Q8IZY2 2146 aa20.84■□□□□ 0.93
PDZRN3-202ENST00000308537 TRIM24O15164 1050 aa20.83■□□□□ 0.93
PDZRN3-202ENST00000308537 STC2O76061 302 aa20.83■□□□□ 0.93
PDZRN3-202ENST00000308537 KAT7O95251 611 aa20.83■□□□□ 0.93
PDZRN3-202ENST00000308537 PAEPP09466 180 aa20.83■□□□□ 0.93
PDZRN3-202ENST00000308537 TKTL1P51854 596 aa20.83■□□□□ 0.93
PDZRN3-202ENST00000308537 YWHAEP62258 255 aaKnown RBP20.83■□□□□ 0.93
PDZRN3-202ENST00000308537 BST2Q10589 180 aaKnown RBP20.83■□□□□ 0.93
PDZRN3-202ENST00000308537 DMC1Q14565 340 aa20.83■□□□□ 0.93
PDZRN3-202ENST00000308537 TMEM270Q6UE05 265 aa20.83■□□□□ 0.93
PDZRN3-202ENST00000308537 LCLAT1Q6UWP7 414 aa20.83■□□□□ 0.93
PDZRN3-202ENST00000308537 RRAGAQ7L523 313 aa20.83■□□□□ 0.93
PDZRN3-202ENST00000308537 KIAA2013Q8IYS2 634 aa20.83■□□□□ 0.93
PDZRN3-202ENST00000308537 PPM1KQ8N3J5 372 aa20.83■□□□□ 0.93
PDZRN3-202ENST00000308537 UBA3Q8TBC4 463 aa20.83■□□□□ 0.93
PDZRN3-202ENST00000308537 EXOC4Q96A65 974 aa20.83■□□□□ 0.93
PDZRN3-202ENST00000308537 PNKPQ96T60 521 aa20.83■□□□□ 0.93
PDZRN3-202ENST00000308537 ULBP1Q9BZM6 244 aa20.83■□□□□ 0.93
PDZRN3-202ENST00000308537 DNAI2Q9GZS0 605 aa20.83■□□□□ 0.93
PDZRN3-202ENST00000308537 CLSTN2Q9H4D0 955 aa20.83■□□□□ 0.93
PDZRN3-202ENST00000308537 MARK1Q9P0L2 795 aa20.83■□□□□ 0.93
PDZRN3-202ENST00000308537 DNMT3LQ9UJW3 386 aa20.83■□□□□ 0.93
PDZRN3-202ENST00000308537 TULP3O75386 442 aa20.82■□□□□ 0.92
PDZRN3-202ENST00000308537 AFPP02771 609 aaKnown RBP20.82■□□□□ 0.92
PDZRN3-202ENST00000308537 CD19P15391 556 aa20.82■□□□□ 0.92
PDZRN3-202ENST00000308537 GAD2Q05329 585 aa20.82■□□□□ 0.92
PDZRN3-202ENST00000308537 SIM2Q14190 667 aaPredicted RBP20.82■□□□□ 0.92
PDZRN3-202ENST00000308537 C10orf120Q5SQS8 335 aa20.82■□□□□ 0.92
PDZRN3-202ENST00000308537 EMC10Q5UCC4 262 aa20.82■□□□□ 0.92
PDZRN3-202ENST00000308537 SLC35F5Q8WV83 523 aa20.82■□□□□ 0.92
PDZRN3-202ENST00000308537 KCTD13Q8WZ19 329 aa20.82■□□□□ 0.92
PDZRN3-202ENST00000308537 NACA2Q9H009 215 aa20.82■□□□□ 0.92
PDZRN3-202ENST00000308537 EBF1Q9UH73 591 aa20.82■□□□□ 0.92
PDZRN3-202ENST00000308537 KIAA1257Q9ULG3 409 aa20.82■□□□□ 0.92
PDZRN3-202ENST00000308537 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.82■□□□□ 0.92
PDZRN3-202ENST00000308537 SLC8A2Q9UPR5 921 aa20.82■□□□□ 0.92
PDZRN3-202ENST00000308537 SPTBN2O15020 2390 aa20.82■□□□□ 0.92
PDZRN3-202ENST00000308537 ZBED1O96006 694 aa20.81■□□□□ 0.92
PDZRN3-202ENST00000308537 SEC13P55735 322 aa20.81■□□□□ 0.92
PDZRN3-202ENST00000308537 C2orf27AQ580R0 203 aa20.81■□□□□ 0.92
PDZRN3-202ENST00000308537 LAIR1Q6GTX8 287 aa20.81■□□□□ 0.92
PDZRN3-202ENST00000308537 TMEM92Q6UXU6 159 aa20.81■□□□□ 0.92
PDZRN3-202ENST00000308537 SCML4Q8N228 414 aa20.81■□□□□ 0.92
PDZRN3-202ENST00000308537 NAT16Q8N8M0 369 aa20.81■□□□□ 0.92
PDZRN3-202ENST00000308537 IL17RCQ8NAC3 791 aa20.81■□□□□ 0.92
PDZRN3-202ENST00000308537 GAB3Q8WWW8 586 aa20.81■□□□□ 0.92
PDZRN3-202ENST00000308537 ACDQ96AP0 544 aa20.81■□□□□ 0.92
PDZRN3-202ENST00000308537 CNOT6LQ96LI5 555 aaKnown RBP20.81■□□□□ 0.92
PDZRN3-202ENST00000308537 INTS2Q9H0H0 1204 aaKnown RBP20.81■□□□□ 0.92
PDZRN3-202ENST00000308537 ARHGEF4Q9NR80 690 aa20.81■□□□□ 0.92
PDZRN3-202ENST00000308537 NCDNQ9UBB6 729 aa20.81■□□□□ 0.92
PDZRN3-202ENST00000308537 MMP17Q9ULZ9 603 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms