RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 RHBDF2Q6PJF5 856 aa12.4□□□□□ -0.42
TRIM40-205ENST00000307859 STRADAQ7RTN6 431 aa12.4□□□□□ -0.42
TRIM40-205ENST00000307859 ZNF280BQ86YH2 543 aa12.4□□□□□ -0.42
TRIM40-205ENST00000307859 CCDC89Q8N998 374 aa12.4□□□□□ -0.42
TRIM40-205ENST00000307859 HASPINQ8TF76 798 aa12.4□□□□□ -0.42
TRIM40-205ENST00000307859 MYLPFQ96A32 169 aa12.4□□□□□ -0.42
TRIM40-205ENST00000307859 SNF8Q96H20 258 aa12.4□□□□□ -0.42
TRIM40-205ENST00000307859 ADAM33Q9BZ11 813 aa12.4□□□□□ -0.42
TRIM40-205ENST00000307859 LRRC4Q9HBW1 653 aa12.4□□□□□ -0.42
TRIM40-205ENST00000307859 TMEM30AQ9NV96 361 aa12.4□□□□□ -0.42
TRIM40-205ENST00000307859 TBC1D13Q9NVG8 400 aa12.4□□□□□ -0.42
TRIM40-205ENST00000307859 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.4□□□□□ -0.42
TRIM40-205ENST00000307859 MTRF1LQ9UGC7 380 aaKnown RBP12.4□□□□□ -0.42
TRIM40-205ENST00000307859 PRKAG2Q9UGJ0 569 aa12.4□□□□□ -0.42
TRIM40-205ENST00000307859 ASIC3Q9UHC3 531 aa12.4□□□□□ -0.42
TRIM40-205ENST00000307859 HHLA1C9JL84 531 aa12.4□□□□□ -0.42
TRIM40-205ENST00000307859 TFE3P19532 575 aaPredicted RBP12.4□□□□□ -0.42
TRIM40-205ENST00000307859 ITIH2P19823 946 aa12.4□□□□□ -0.42
TRIM40-205ENST00000307859 CACNA2D1P54289 1103 aa12.4□□□□□ -0.42
TRIM40-205ENST00000307859 CDH6P55285 790 aa12.4□□□□□ -0.42
TRIM40-205ENST00000307859 DHX9Q08211 1270 aaKnown RBP12.4□□□□□ -0.42
TRIM40-205ENST00000307859 DPYSL3Q14195 570 aa12.4□□□□□ -0.42
TRIM40-205ENST00000307859 OVOS1Q6IE37 1185 aa12.4□□□□□ -0.42
TRIM40-205ENST00000307859 LRIG3Q6UXM1 1119 aa12.4□□□□□ -0.42
TRIM40-205ENST00000307859 ZNF365Q70YC5 407 aa12.4□□□□□ -0.42
TRIM40-205ENST00000307859 BNIPLQ7Z465 357 aa12.4□□□□□ -0.42
TRIM40-205ENST00000307859 SIX6OS1Q8N1H7 587 aa12.4□□□□□ -0.42
TRIM40-205ENST00000307859 ALLCQ8N6M5 410 aa12.4□□□□□ -0.42
TRIM40-205ENST00000307859 DBF4BQ8NFT6 615 aa12.4□□□□□ -0.42
TRIM40-205ENST00000307859 OR10T2Q8NGX3 314 aa12.4□□□□□ -0.42
TRIM40-205ENST00000307859 CCHCR1Q8TD31 782 aa12.4□□□□□ -0.42
TRIM40-205ENST00000307859 SEPT8Q92599 483 aa12.4□□□□□ -0.42
TRIM40-205ENST00000307859 APBB2Q92870 758 aa12.4□□□□□ -0.42
TRIM40-205ENST00000307859 NT5C3BQ969T7 300 aa12.4□□□□□ -0.42
TRIM40-205ENST00000307859 SLC2A13Q96QE2 648 aa12.4□□□□□ -0.42
TRIM40-205ENST00000307859 SNRNP25Q9BV90 132 aaKnown RBP12.4□□□□□ -0.42
TRIM40-205ENST00000307859 CNGB3Q9NQW8 809 aa12.4□□□□□ -0.42
TRIM40-205ENST00000307859 F8W810 466 aa12.39□□□□□ -0.43
TRIM40-205ENST00000307859 APOC4-APOC2K7ER74 178 aa12.39□□□□□ -0.43
TRIM40-205ENST00000307859 ENPP3O14638 875 aa12.39□□□□□ -0.43
TRIM40-205ENST00000307859 OPA1O60313 960 aa12.39□□□□□ -0.43
TRIM40-205ENST00000307859 KRT14P02533 472 aa12.39□□□□□ -0.43
TRIM40-205ENST00000307859 APOC2P02655 101 aa12.39□□□□□ -0.43
TRIM40-205ENST00000307859 ATF2P15336 505 aa12.39□□□□□ -0.43
TRIM40-205ENST00000307859 TKTL1P51854 596 aa12.39□□□□□ -0.43
TRIM40-205ENST00000307859 DAOAP59103 153 aa12.39□□□□□ -0.43
TRIM40-205ENST00000307859 OTUD4Q01804 1114 aaKnown RBP12.39□□□□□ -0.43
TRIM40-205ENST00000307859 CAV1Q03135 178 aa12.39□□□□□ -0.43
TRIM40-205ENST00000307859 GABPB1Q06547 395 aaPredicted RBP12.39□□□□□ -0.43
TRIM40-205ENST00000307859 CALCOCO2Q13137 446 aa12.39□□□□□ -0.43
TRIM40-205ENST00000307859 MAPRE1Q15691 268 aaKnown RBP12.39□□□□□ -0.43
TRIM40-205ENST00000307859 SLC25A52Q3SY17 297 aa12.39□□□□□ -0.43
TRIM40-205ENST00000307859 OTUD1Q5VV17 481 aaPredicted RBP12.39□□□□□ -0.43
TRIM40-205ENST00000307859 GPRIN1Q7Z2K8 1008 aa12.39□□□□□ -0.43
TRIM40-205ENST00000307859 ANKRD33Q7Z3H0 272 aa12.39□□□□□ -0.43
TRIM40-205ENST00000307859 RFX6Q8HWS3 928 aa12.39□□□□□ -0.43
TRIM40-205ENST00000307859 MAP7D3Q8IWC1 876 aa12.39□□□□□ -0.43
TRIM40-205ENST00000307859 DEFB106AQ8N104 65 aa12.39□□□□□ -0.43
TRIM40-205ENST00000307859 THEM5Q8N1Q8 247 aa12.39□□□□□ -0.43
TRIM40-205ENST00000307859 BBOF1Q8ND07 529 aa12.39□□□□□ -0.43
TRIM40-205ENST00000307859 ACTL9Q8TC94 416 aa12.39□□□□□ -0.43
TRIM40-205ENST00000307859 RIN2Q8WYP3 895 aaPredicted RBP12.39□□□□□ -0.43
TRIM40-205ENST00000307859 FAF2Q96CS3 445 aa12.39□□□□□ -0.43
TRIM40-205ENST00000307859 RUFY1Q96T51 708 aa12.39□□□□□ -0.43
TRIM40-205ENST00000307859 NPY6RQ99463 290 aa12.39□□□□□ -0.43
TRIM40-205ENST00000307859 CALN1Q9BXU9 219 aa12.39□□□□□ -0.43
TRIM40-205ENST00000307859 PCDH18Q9HCL0 1135 aa12.39□□□□□ -0.43
TRIM40-205ENST00000307859 IL4RP24394 825 aa12.38□□□□□ -0.43
TRIM40-205ENST00000307859 NOS2P35228 1153 aa12.38□□□□□ -0.43
TRIM40-205ENST00000307859 NDUFV1P49821 464 aa12.38□□□□□ -0.43
TRIM40-205ENST00000307859 YWHAZP63104 245 aaKnown RBP12.38□□□□□ -0.43
TRIM40-205ENST00000307859 DYNLT1P63172 113 aa12.38□□□□□ -0.43
TRIM40-205ENST00000307859 FAM193AP78312 1265 aa12.38□□□□□ -0.43
TRIM40-205ENST00000307859 YWHAHQ04917 246 aaPredicted RBP12.38□□□□□ -0.43
TRIM40-205ENST00000307859 MMRN1Q13201 1228 aa12.38□□□□□ -0.43
TRIM40-205ENST00000307859 TFDP2Q14188 446 aa12.38□□□□□ -0.43
TRIM40-205ENST00000307859 KRT81Q14533 505 aa12.38□□□□□ -0.43
TRIM40-205ENST00000307859 DPYSL2Q16555 572 aa12.38□□□□□ -0.43
TRIM40-205ENST00000307859 ZC3H12AQ5D1E8 599 aaKnown RBP12.38□□□□□ -0.43
TRIM40-205ENST00000307859 ERMARDQ5T6L9 678 aa12.38□□□□□ -0.43
TRIM40-205ENST00000307859 SCYL2Q6P3W7 929 aa12.38□□□□□ -0.43
TRIM40-205ENST00000307859 CRIPAKQ8N1N5 446 aa12.38□□□□□ -0.43
TRIM40-205ENST00000307859 SCML4Q8N228 414 aa12.38□□□□□ -0.43
TRIM40-205ENST00000307859 ADAMTS19Q8TE59 1207 aa12.38□□□□□ -0.43
TRIM40-205ENST00000307859 NDRG1Q92597 394 aaKnown RBP12.38□□□□□ -0.43
TRIM40-205ENST00000307859 FAM149B1Q96BN6 582 aa12.38□□□□□ -0.43
TRIM40-205ENST00000307859 HAUS1Q96CS2 278 aa12.38□□□□□ -0.43
TRIM40-205ENST00000307859 RNF157Q96PX1 679 aa12.38□□□□□ -0.43
TRIM40-205ENST00000307859 ASB2Q96Q27 587 aa12.38□□□□□ -0.43
TRIM40-205ENST00000307859 KCNK16Q96T55 309 aa12.38□□□□□ -0.43
TRIM40-205ENST00000307859 ZNF670Q9BS34 389 aa12.38□□□□□ -0.43
TRIM40-205ENST00000307859 ULBP1Q9BZM6 244 aa12.38□□□□□ -0.43
TRIM40-205ENST00000307859 PNPLA8Q9NP80 782 aa12.38□□□□□ -0.43
TRIM40-205ENST00000307859 TMLHEQ9NVH6 421 aa12.38□□□□□ -0.43
TRIM40-205ENST00000307859 GPATCH2LQ9NWQ4 482 aa12.38□□□□□ -0.43
TRIM40-205ENST00000307859 ZNF148Q9UQR1 794 aa12.38□□□□□ -0.43
TRIM40-205ENST00000307859 PLAAQ9Y263 795 aa12.38□□□□□ -0.43
TRIM40-205ENST00000307859 FAN1Q9Y2M0 1017 aa12.38□□□□□ -0.43
TRIM40-205ENST00000307859 HCN4Q9Y3Q4 1203 aa12.38□□□□□ -0.43
TRIM40-205ENST00000307859 NFS1Q9Y697 457 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms