RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 GSTA3Q16772 222 aa8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 ZC3H18Q86VM9 953 aaKnown RBP8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 ST13P5Q8NFI4 369 aaPredicted RBP8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 CEP70Q8NHQ1 597 aa8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 OSMRQ99650 979 aa8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 GALNT8Q9NY28 637 aa8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 USE1Q9NZ43 259 aa8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 PCSK1NQ9UHG2 260 aa8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 NOVA2Q9UNW9 492 aaKnown RBP8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 ABCA3Q99758 1704 aa8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 TTLL13PA6NNM8 815 aa8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 PSMD12O00232 456 aaPredicted RBP8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 RASSF9O75901 435 aa8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 IRF1P10914 325 aa8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 PMS1P54277 932 aaKnown RBP8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 CSE1LP55060 971 aaKnown RBP8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 FAM117BQ6P1L5 589 aa8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 RGS9BPQ6ZS82 235 aa8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 SRLQ86TD4 932 aa8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 PLD3Q8IV08 490 aa8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 CLYBLQ8N0X4 340 aa8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 DNAJB3Q8WWF6 145 aa8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 TBCBQ99426 244 aa8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 DDX4Q9NQI0 724 aaKnown RBP8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 MRPS17Q9Y2R5 130 aaKnown RBP8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 UBA1P22314 1058 aaKnown RBP8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 C2orf54Q08AI8 447 aa8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 NNTQ13423 1086 aa8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 GOLGA7BQ2TAP0 167 aa8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 RETSATQ6NUM9 610 aa8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 PHC3Q8NDX5 983 aa8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 DTNBP1Q96EV8 351 aa8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 PPP1R16AQ96I34 528 aa8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 SAMD11Q96NU1 681 aa8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 HIPK3Q9H422 1215 aa8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 TRAV19A0A0A6YYK7 116 aa8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 FKBP9O95302 570 aa8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 LYPLA2O95372 231 aa8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 GCNT1Q02742 428 aa8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 CYP24A1Q07973 514 aa8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 CAMK2GQ13555 558 aaPredicted RBP8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 C11orf88Q6PI97 169 aa8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 FKBP9P1Q75LS8 142 aa8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 CNPY3Q9BT09 278 aa8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 CINPQ9BW66 212 aaPredicted RBP8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 PRRG3Q9BZD7 231 aa8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 LAMA4Q16363 1823 aa8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 EOMESO95936 686 aa8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 ERBB2P04626 1255 aa8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 RPN2P04844 631 aa8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 LRRC52Q8N7C0 313 aa8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 PTPRN2Q92932 1015 aa8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 GFM2Q969S9 779 aaKnown RBP8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 C18orf25Q96B23 403 aaPredicted RBP8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 LNPEPQ9UIQ6 1025 aa8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 TNFSF13BQ9Y275 285 aa8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 ZBTB22O15209 634 aa8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 NCK2O43639 380 aa8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 TLL1O43897 1013 aa8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 TRIM49P0CI25 452 aa8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 TRIM49CP0CI26 452 aa8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 KITP10721 976 aa8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 SELPP16109 830 aa8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 ZNF24P17028 368 aa8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 CHKAP35790 457 aa8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 POLE2P56282 527 aa8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 SHROOM1Q2M3G4 852 aaPredicted RBP8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 CCDC60Q8IWA6 550 aaPredicted RBP8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 LEMD2Q8NC56 503 aa8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 FEZF2Q8TBJ5 459 aa8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 RBBP8Q99708 897 aa8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 NFKBIZQ9BYH8 718 aa8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 ASAH2Q9NR71 780 aa8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 TAF1LQ8IZX4 1826 aa8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 F8W810 466 aa8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 CSH1P0DML2 217 aa8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 CSH2P0DML3 217 aa8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 SERPINB9P50453 376 aa8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 BYSLQ13895 437 aaKnown RBP8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 LUZP2Q86TE4 346 aa8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 DHX40Q8IX18 779 aaKnown RBP8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 BSNDQ8WZ55 320 aa8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 ELMO2Q96JJ3 720 aa8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 GTF3C4Q9UKN8 822 aa8.6□□□□□ -1.03
PCDHB1-201ENST00000306549 ATP9BO43861 1147 aa8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 USP2O75604 605 aaPredicted RBP8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 RPSAP08865 295 aaKnown RBP8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 CDC25CP30307 473 aa8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 CXCR5P32302 372 aa8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 ICAM3P32942 547 aa8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 FNTAP49354 379 aa8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 C1QBPQ07021 282 aaKnown RBP8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 ITGA7Q13683 1181 aa8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 IFNL1Q8IU54 200 aa8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 PABPC5Q96DU9 382 aaKnown RBP8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 CELF4Q9BZC1 486 aaKnown RBP8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 DDX28Q9NUL7 540 aaKnown RBP8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 CRLS1Q9UJA2 301 aa8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 STRCP1A6NGW2 1772 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms