RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 ASIC3Q9UHC3 531 aa12.53□□□□□ -0.4
TPM3-202ENST00000302206 HHLA1C9JL84 531 aa12.52□□□□□ -0.41
TPM3-202ENST00000302206 TRAPPC3O43617 180 aa12.52□□□□□ -0.41
TPM3-202ENST00000302206 CST8O60676 142 aa12.52□□□□□ -0.41
TPM3-202ENST00000302206 KRT14P02533 472 aa12.52□□□□□ -0.41
TPM3-202ENST00000302206 BRCC3P46736 316 aa12.52□□□□□ -0.41
TPM3-202ENST00000302206 CDH6P55285 790 aa12.52□□□□□ -0.41
TPM3-202ENST00000302206 MAP3K7CLP57077 242 aa12.52□□□□□ -0.41
TPM3-202ENST00000302206 YWHAZP63104 245 aaKnown RBP12.52□□□□□ -0.41
TPM3-202ENST00000302206 ATP11AP98196 1134 aa12.52□□□□□ -0.41
TPM3-202ENST00000302206 TSPY1Q01534 308 aa12.52□□□□□ -0.41
TPM3-202ENST00000302206 DHX9Q08211 1270 aaKnown RBP12.52□□□□□ -0.41
TPM3-202ENST00000302206 DPYSL3Q14195 570 aa12.52□□□□□ -0.41
TPM3-202ENST00000302206 GPNMBQ14956 572 aa12.52□□□□□ -0.41
TPM3-202ENST00000302206 DPYSL2Q16555 572 aa12.52□□□□□ -0.41
TPM3-202ENST00000302206 ERMARDQ5T6L9 678 aa12.52□□□□□ -0.41
TPM3-202ENST00000302206 OVOS1Q6IE37 1185 aa12.52□□□□□ -0.41
TPM3-202ENST00000302206 RHBDF2Q6PJF5 856 aa12.52□□□□□ -0.41
TPM3-202ENST00000302206 RFX6Q8HWS3 928 aa12.52□□□□□ -0.41
TPM3-202ENST00000302206 FBXO25Q8TCJ0 367 aa12.52□□□□□ -0.41
TPM3-202ENST00000302206 CLEC4CQ8WTT0 213 aa12.52□□□□□ -0.41
TPM3-202ENST00000302206 HSPH1Q92598 858 aa12.52□□□□□ -0.41
TPM3-202ENST00000302206 MYLPFQ96A32 169 aa12.52□□□□□ -0.41
TPM3-202ENST00000302206 ACSF2Q96CM8 615 aaPredicted RBP12.52□□□□□ -0.41
TPM3-202ENST00000302206 FAF2Q96CS3 445 aa12.52□□□□□ -0.41
TPM3-202ENST00000302206 TOX2Q96NM4 488 aa12.52□□□□□ -0.41
TPM3-202ENST00000302206 ZIM3Q96PE6 472 aa12.52□□□□□ -0.41
TPM3-202ENST00000302206 ZNF670Q9BS34 389 aa12.52□□□□□ -0.41
TPM3-202ENST00000302206 MAK16Q9BXY0 300 aaKnown RBP12.52□□□□□ -0.41
TPM3-202ENST00000302206 PCDH9Q9HC56 1237 aa12.52□□□□□ -0.41
TPM3-202ENST00000302206 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.52□□□□□ -0.41
TPM3-202ENST00000302206 TBC1D13Q9NVG8 400 aa12.52□□□□□ -0.41
TPM3-202ENST00000302206 RCOR3Q9P2K3 495 aaPredicted RBP12.52□□□□□ -0.41
TPM3-202ENST00000302206 DNPEPQ9ULA0 475 aa12.52□□□□□ -0.41
TPM3-202ENST00000302206 STAP1Q9ULZ2 295 aa12.52□□□□□ -0.41
TPM3-202ENST00000302206 ZNF148Q9UQR1 794 aa12.52□□□□□ -0.41
TPM3-202ENST00000302206 TIMM13Q9Y5L4 95 aaPredicted RBP12.52□□□□□ -0.41
TPM3-202ENST00000302206 COL4A4P53420 1690 aaPredicted RBP12.51□□□□□ -0.41
TPM3-202ENST00000302206 PRUNE2Q8WUY3 3088 aa12.51□□□□□ -0.41
TPM3-202ENST00000302206 TANC1Q9C0D5 1861 aa12.51□□□□□ -0.41
TPM3-202ENST00000302206 SYN3O14994 580 aa12.51□□□□□ -0.41
TPM3-202ENST00000302206 BEST1O76090 585 aa12.51□□□□□ -0.41
TPM3-202ENST00000302206 DDHD2O94830 711 aa12.51□□□□□ -0.41
TPM3-202ENST00000302206 OAZ2O95190 189 aa12.51□□□□□ -0.41
TPM3-202ENST00000302206 CXCL10P02778 98 aa12.51□□□□□ -0.41
TPM3-202ENST00000302206 ZFXP17010 805 aaPredicted RBP12.51□□□□□ -0.41
TPM3-202ENST00000302206 COL9A1P20849 921 aa12.51□□□□□ -0.41
TPM3-202ENST00000302206 TGM2P21980 687 aa12.51□□□□□ -0.41
TPM3-202ENST00000302206 TKTL1P51854 596 aa12.51□□□□□ -0.41
TPM3-202ENST00000302206 AIF1P55008 147 aa12.51□□□□□ -0.41
TPM3-202ENST00000302206 EIF3BP55884 814 aaKnown RBP12.51□□□□□ -0.41
TPM3-202ENST00000302206 DAOAP59103 153 aa12.51□□□□□ -0.41
TPM3-202ENST00000302206 KRT81Q14533 505 aa12.51□□□□□ -0.41
TPM3-202ENST00000302206 UAP1Q16222 522 aaPredicted RBP12.51□□□□□ -0.41
TPM3-202ENST00000302206 CDO1Q16878 200 aa12.51□□□□□ -0.41
TPM3-202ENST00000302206 CCDC142Q17RM4 750 aa12.51□□□□□ -0.41
TPM3-202ENST00000302206 C1orf53Q5VUE5 145 aa12.51□□□□□ -0.41
TPM3-202ENST00000302206 C4orf50Q6ZRC1 276 aa12.51□□□□□ -0.41
TPM3-202ENST00000302206 BEND5Q7L4P6 421 aa12.51□□□□□ -0.41
TPM3-202ENST00000302206 DEFB106AQ8N104 65 aa12.51□□□□□ -0.41
TPM3-202ENST00000302206 ZMIZ2Q8NF64 920 aa12.51□□□□□ -0.41
TPM3-202ENST00000302206 DBF4BQ8NFT6 615 aa12.51□□□□□ -0.41
TPM3-202ENST00000302206 MAFAQ8NHW3 353 aaPredicted RBP12.51□□□□□ -0.41
TPM3-202ENST00000302206 ACTL9Q8TC94 416 aa12.51□□□□□ -0.41
TPM3-202ENST00000302206 FAM193BQ96PV7 902 aaPredicted RBP12.51□□□□□ -0.41
TPM3-202ENST00000302206 RNF157Q96PX1 679 aa12.51□□□□□ -0.41
TPM3-202ENST00000302206 SLC9A7Q96T83 725 aa12.51□□□□□ -0.41
TPM3-202ENST00000302206 NPY6RQ99463 290 aa12.51□□□□□ -0.41
TPM3-202ENST00000302206 LBHD1Q9BQE6 289 aaPredicted RBP12.51□□□□□ -0.41
TPM3-202ENST00000302206 SNRNP25Q9BV90 132 aaKnown RBP12.51□□□□□ -0.41
TPM3-202ENST00000302206 TRIM62Q9BVG3 475 aa12.51□□□□□ -0.41
TPM3-202ENST00000302206 CALN1Q9BXU9 219 aa12.51□□□□□ -0.41
TPM3-202ENST00000302206 POPDC2Q9HBU9 364 aa12.51□□□□□ -0.41
TPM3-202ENST00000302206 PCDH18Q9HCL0 1135 aa12.51□□□□□ -0.41
TPM3-202ENST00000302206 DMAP1Q9NPF5 467 aaPredicted RBP12.51□□□□□ -0.41
TPM3-202ENST00000302206 TMEM51Q9NW97 253 aa12.51□□□□□ -0.41
TPM3-202ENST00000302206 PCDHB7Q9Y5E2 793 aa12.51□□□□□ -0.41
TPM3-202ENST00000302206 I3L4J1 428 aa12.5□□□□□ -0.41
TPM3-202ENST00000302206 TP73O15350 636 aa12.5□□□□□ -0.41
TPM3-202ENST00000302206 CD48P09326 243 aa12.5□□□□□ -0.41
TPM3-202ENST00000302206 NUDT17P0C025 328 aa12.5□□□□□ -0.41
TPM3-202ENST00000302206 RARGP13631 454 aa12.5□□□□□ -0.41
TPM3-202ENST00000302206 IL4RP24394 825 aa12.5□□□□□ -0.41
TPM3-202ENST00000302206 ADCY8P40145 1251 aa12.5□□□□□ -0.41
TPM3-202ENST00000302206 SULT1E1P49888 294 aa12.5□□□□□ -0.41
TPM3-202ENST00000302206 PMS2P54278 862 aa12.5□□□□□ -0.41
TPM3-202ENST00000302206 OTUD4Q01804 1114 aaKnown RBP12.5□□□□□ -0.41
TPM3-202ENST00000302206 YWHAHQ04917 246 aaPredicted RBP12.5□□□□□ -0.41
TPM3-202ENST00000302206 NOMO1Q15155 1222 aa12.5□□□□□ -0.41
TPM3-202ENST00000302206 SLC9A4Q6AI14 798 aa12.5□□□□□ -0.41
TPM3-202ENST00000302206 PM20D1Q6GTS8 502 aa12.5□□□□□ -0.41
TPM3-202ENST00000302206 SCYL2Q6P3W7 929 aa12.5□□□□□ -0.41
TPM3-202ENST00000302206 SLC39A5Q6ZMH5 540 aa12.5□□□□□ -0.41
TPM3-202ENST00000302206 TRMT10CQ7L0Y3 403 aaKnown RBP12.5□□□□□ -0.41
TPM3-202ENST00000302206 GSTA5Q7RTV2 222 aa12.5□□□□□ -0.41
TPM3-202ENST00000302206 CROCCP2Q86T23 111 aa12.5□□□□□ -0.41
TPM3-202ENST00000302206 ZNF280BQ86YH2 543 aa12.5□□□□□ -0.41
TPM3-202ENST00000302206 ABI1Q8IZP0 508 aa12.5□□□□□ -0.41
TPM3-202ENST00000302206 CRIPAKQ8N1N5 446 aa12.5□□□□□ -0.41
TPM3-202ENST00000302206 PGAP3Q96FM1 320 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms