RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 CHKBQ9Y259 395 aa14.56□□□□□ -0.08
SDC2-201ENST00000302190 DNAJC16Q9Y2G8 782 aa14.56□□□□□ -0.08
SDC2-201ENST00000302190 E9PBE3 544 aa14.56□□□□□ -0.08
SDC2-201ENST00000302190 AHCYL1O43865 530 aa14.56□□□□□ -0.08
SDC2-201ENST00000302190 KLHL41O60662 606 aa14.56□□□□□ -0.08
SDC2-201ENST00000302190 USP2O75604 605 aaPredicted RBP14.56□□□□□ -0.08
SDC2-201ENST00000302190 MMP8P22894 467 aa14.56□□□□□ -0.08
SDC2-201ENST00000302190 RFC5P40937 340 aa14.56□□□□□ -0.08
SDC2-201ENST00000302190 AP2B1P63010 937 aa14.56□□□□□ -0.08
SDC2-201ENST00000302190 MCL1Q07820 350 aa14.56□□□□□ -0.08
SDC2-201ENST00000302190 GALNT4Q8N4A0 578 aa14.56□□□□□ -0.08
SDC2-201ENST00000302190 DRAXINQ8NBI3 349 aaPredicted RBP14.56□□□□□ -0.08
SDC2-201ENST00000302190 ZNF669Q96BR6 464 aaPredicted RBP14.56□□□□□ -0.08
SDC2-201ENST00000302190 ALKBH8Q96BT7 664 aaKnown RBP14.56□□□□□ -0.08
SDC2-201ENST00000302190 ASCC2Q9H1I8 757 aaPredicted RBP14.56□□□□□ -0.08
SDC2-201ENST00000302190 PORCNQ9H237 461 aa14.56□□□□□ -0.08
SDC2-201ENST00000302190 ZNF395Q9H8N7 513 aaPredicted RBP14.56□□□□□ -0.08
SDC2-201ENST00000302190 RNPEPL1Q9HAU8 725 aa14.56□□□□□ -0.08
SDC2-201ENST00000302190 CYP39A1Q9NYL5 469 aa14.56□□□□□ -0.08
SDC2-201ENST00000302190 MTO1Q9Y2Z2 717 aaKnown RBP14.56□□□□□ -0.08
SDC2-201ENST00000302190 PTPRJQ12913 1337 aa14.56□□□□□ -0.08
SDC2-201ENST00000302190 MYPNQ86TC9 1320 aa14.56□□□□□ -0.08
SDC2-201ENST00000302190 TMEM191CA6NGB0 347 aa14.56□□□□□ -0.08
SDC2-201ENST00000302190 PTPRAP18433 802 aa14.56□□□□□ -0.08
SDC2-201ENST00000302190 CALB2P22676 271 aa14.56□□□□□ -0.08
SDC2-201ENST00000302190 SLC12A1Q13621 1099 aa14.56□□□□□ -0.08
SDC2-201ENST00000302190 RPS6KA2Q15349 733 aa14.56□□□□□ -0.08
SDC2-201ENST00000302190 LACTB2Q53H82 288 aaPredicted RBP14.56□□□□□ -0.08
SDC2-201ENST00000302190 IER5Q5VY09 327 aa14.56□□□□□ -0.08
SDC2-201ENST00000302190 TWF2Q6IBS0 349 aaKnown RBP14.56□□□□□ -0.08
SDC2-201ENST00000302190 MFSD5Q6N075 450 aa14.56□□□□□ -0.08
SDC2-201ENST00000302190 MON1BQ7L1V2 547 aa14.56□□□□□ -0.08
SDC2-201ENST00000302190 SAMD3Q8N6K7 520 aa14.56□□□□□ -0.08
SDC2-201ENST00000302190 AAASQ9NRG9 546 aa14.56□□□□□ -0.08
SDC2-201ENST00000302190 ADA2Q9NZK5 511 aa14.56□□□□□ -0.08
SDC2-201ENST00000302190 TSR3Q9UJK0 312 aaKnown RBP14.56□□□□□ -0.08
SDC2-201ENST00000302190 RPS6KL1Q9Y6S9 549 aa14.56□□□□□ -0.08
SDC2-201ENST00000302190 MGRN1O60291 552 aa14.55□□□□□ -0.08
SDC2-201ENST00000302190 PAEPP09466 180 aa14.55□□□□□ -0.08
SDC2-201ENST00000302190 UNGP13051 313 aaPredicted RBP14.55□□□□□ -0.08
SDC2-201ENST00000302190 WNT7BP56706 349 aa14.55□□□□□ -0.08
SDC2-201ENST00000302190 PDK4Q16654 411 aa14.55□□□□□ -0.08
SDC2-201ENST00000302190 HABP4Q5JVS0 413 aaKnown RBP14.55□□□□□ -0.08
SDC2-201ENST00000302190 TCHHL1Q5QJ38 904 aaPredicted RBP14.55□□□□□ -0.08
SDC2-201ENST00000302190 TTC39BQ5VTQ0 682 aaPredicted RBP14.55□□□□□ -0.08
SDC2-201ENST00000302190 STK32AQ8WU08 396 aa14.55□□□□□ -0.08
SDC2-201ENST00000302190 FAM136AQ96C01 138 aa14.55□□□□□ -0.08
SDC2-201ENST00000302190 KLRG1Q96E93 195 aa14.55□□□□□ -0.08
SDC2-201ENST00000302190 B3GNT5Q9BYG0 378 aa14.55□□□□□ -0.08
SDC2-201ENST00000302190 DCLRE1BQ9H816 532 aa14.55□□□□□ -0.08
SDC2-201ENST00000302190 ARL8BQ9NVJ2 186 aa14.55□□□□□ -0.08
SDC2-201ENST00000302190 SLC24A2Q9UI40 661 aa14.55□□□□□ -0.08
SDC2-201ENST00000302190 A0A0B4J269 797 aa14.55□□□□□ -0.08
SDC2-201ENST00000302190 TCRBV7S3A2A0A539 114 aa14.55□□□□□ -0.08
SDC2-201ENST00000302190 C5orf60A6NFR6 353 aa14.55□□□□□ -0.08
SDC2-201ENST00000302190 EDF1O60869 148 aaKnown RBP14.55□□□□□ -0.08
SDC2-201ENST00000302190 MICAL2O94851 1124 aa14.55□□□□□ -0.08
SDC2-201ENST00000302190 LMNAP02545 664 aaKnown RBP14.55□□□□□ -0.08
SDC2-201ENST00000302190 ZNF286BP0CG31 522 aa14.55□□□□□ -0.08
SDC2-201ENST00000302190 NOVP48745 357 aa14.55□□□□□ -0.08
SDC2-201ENST00000302190 HSDL1Q3SXM5 330 aa14.55□□□□□ -0.08
SDC2-201ENST00000302190 LAYNQ6UX15 382 aa14.55□□□□□ -0.08
SDC2-201ENST00000302190 SPATA24Q86W54 205 aa14.55□□□□□ -0.08
SDC2-201ENST00000302190 SLC26A11Q86WA9 606 aa14.55□□□□□ -0.08
SDC2-201ENST00000302190 MFN1Q8IWA4 741 aa14.55□□□□□ -0.08
SDC2-201ENST00000302190 BRSK2Q8IWQ3 736 aa14.55□□□□□ -0.08
SDC2-201ENST00000302190 MMP19Q99542 508 aa14.55□□□□□ -0.08
SDC2-201ENST00000302190 ADAM7Q9H2U9 754 aa14.55□□□□□ -0.08
SDC2-201ENST00000302190 WDR35Q9P2L0 1181 aa14.55□□□□□ -0.08
SDC2-201ENST00000302190 TCRBV9S1A1TA0A576 114 aa14.55□□□□□ -0.08
SDC2-201ENST00000302190 LACTBL1A8MY62 500 aa14.55□□□□□ -0.08
SDC2-201ENST00000302190 ATP6V1B1P15313 513 aa14.55□□□□□ -0.08
SDC2-201ENST00000302190 TPH1P17752 444 aa14.55□□□□□ -0.08
SDC2-201ENST00000302190 AMPD1P23109 780 aa14.55□□□□□ -0.08
SDC2-201ENST00000302190 AVPR1AP37288 418 aa14.55□□□□□ -0.08
SDC2-201ENST00000302190 DBN1Q16643 649 aa14.55□□□□□ -0.08
SDC2-201ENST00000302190 PAN2Q504Q3 1202 aaKnown RBP14.55□□□□□ -0.08
SDC2-201ENST00000302190 SPDYCQ5MJ68 293 aa14.55□□□□□ -0.08
SDC2-201ENST00000302190 TREML2Q5T2D2 321 aa14.55□□□□□ -0.08
SDC2-201ENST00000302190 TMA16Q96EY4 203 aaKnown RBP14.55□□□□□ -0.08
SDC2-201ENST00000302190 TMEM176AQ96HP8 235 aa14.55□□□□□ -0.08
SDC2-201ENST00000302190 MYH7BA7E2Y1 1941 aa14.55□□□□□ -0.08
SDC2-201ENST00000302190 GLTPD2A6NH11 291 aa14.54□□□□□ -0.08
SDC2-201ENST00000302190 SRRM3A6NNA2 597 aaPredicted RBP14.54□□□□□ -0.08
SDC2-201ENST00000302190 TTLL13PA6NNM8 815 aa14.54□□□□□ -0.08
SDC2-201ENST00000302190 SMNDC1O75940 238 aaKnown RBP eCLIP14.54□□□□□ -0.08
SDC2-201ENST00000302190 C4BPAP04003 597 aaKnown RBP14.54□□□□□ -0.08
SDC2-201ENST00000302190 STIP1P31948 543 aaKnown RBP14.54□□□□□ -0.08
SDC2-201ENST00000302190 MSX2P35548 267 aaPredicted RBP14.54□□□□□ -0.08
SDC2-201ENST00000302190 SERPINB5P36952 375 aa14.54□□□□□ -0.08
SDC2-201ENST00000302190 VHLP40337 213 aa14.54□□□□□ -0.08
SDC2-201ENST00000302190 MLH1P40692 756 aa14.54□□□□□ -0.08
SDC2-201ENST00000302190 RBP5P82980 135 aa14.54□□□□□ -0.08
SDC2-201ENST00000302190 TTLL4Q14679 1199 aa14.54□□□□□ -0.08
SDC2-201ENST00000302190 JADE1Q6IE81 842 aa14.54□□□□□ -0.08
SDC2-201ENST00000302190 MPZL3Q6UWV2 235 aa14.54□□□□□ -0.08
SDC2-201ENST00000302190 APOBEC3FQ8IUX4 373 aaKnown RBP14.54□□□□□ -0.08
SDC2-201ENST00000302190 WDR49Q8IV35 697 aa14.54□□□□□ -0.08
SDC2-201ENST00000302190 ZC3H3Q8IXZ2 948 aaKnown RBP14.54□□□□□ -0.08
SDC2-201ENST00000302190 PYDC1Q8WXC3 89 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms