RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 DENND1BQ6P3S1 775 aa17.78■□□□□ 0.44
CDCP1-201ENST00000296129 MYCBPAPQ8TBZ2 947 aa17.78■□□□□ 0.44
CDCP1-201ENST00000296129 USP13Q92995 863 aaPredicted RBP17.78■□□□□ 0.44
CDCP1-201ENST00000296129 FAM136AQ96C01 138 aa17.78■□□□□ 0.44
CDCP1-201ENST00000296129 MRIQ9BWK5 157 aa17.78■□□□□ 0.44
CDCP1-201ENST00000296129 PORCNQ9H237 461 aa17.78■□□□□ 0.44
CDCP1-201ENST00000296129 MRGBPQ9NV56 204 aa17.78■□□□□ 0.44
CDCP1-201ENST00000296129 MYO5BQ9ULV0 1848 aa17.78■□□□□ 0.44
CDCP1-201ENST00000296129 ZSCAN5CA6NGD5 496 aaPredicted RBP17.78■□□□□ 0.44
CDCP1-201ENST00000296129 CKMP06732 381 aa17.78■□□□□ 0.44
CDCP1-201ENST00000296129 RHOCP08134 193 aa17.78■□□□□ 0.44
CDCP1-201ENST00000296129 COPAP53621 1224 aa17.78■□□□□ 0.44
CDCP1-201ENST00000296129 NT5DC3Q86UY8 548 aa17.78■□□□□ 0.44
CDCP1-201ENST00000296129 EIF2AQ9BY44 585 aaKnown RBP17.78■□□□□ 0.44
CDCP1-201ENST00000296129 SLC40A1Q9NP59 571 aa17.78■□□□□ 0.44
CDCP1-201ENST00000296129 PDGFCQ9NRA1 345 aa17.78■□□□□ 0.44
CDCP1-201ENST00000296129 PJA2O43164 708 aa17.77■□□□□ 0.44
CDCP1-201ENST00000296129 GHRP10912 638 aa17.77■□□□□ 0.44
CDCP1-201ENST00000296129 CCDC130P13994 396 aa17.77■□□□□ 0.44
CDCP1-201ENST00000296129 MZF1P28698 734 aaPredicted RBP17.77■□□□□ 0.44
CDCP1-201ENST00000296129 KCNMA1Q12791 1236 aa17.77■□□□□ 0.44
CDCP1-201ENST00000296129 MTFR1Q15390 333 aa17.77■□□□□ 0.44
CDCP1-201ENST00000296129 MEA1Q16626 185 aa17.77■□□□□ 0.44
CDCP1-201ENST00000296129 SLC26A11Q86WA9 606 aa17.77■□□□□ 0.44
CDCP1-201ENST00000296129 CLEC4FQ8N1N0 589 aa17.77■□□□□ 0.44
CDCP1-201ENST00000296129 SLC25A13Q9UJS0 675 aa17.77■□□□□ 0.44
CDCP1-201ENST00000296129 CYP3A7-CYP3A51PA0A087WV96 503 aa17.77■□□□□ 0.44
CDCP1-201ENST00000296129 MANSC4A6NHS7 340 aaPredicted RBP17.77■□□□□ 0.44
CDCP1-201ENST00000296129 DISP2A7MBM2 1401 aa17.77■□□□□ 0.44
CDCP1-201ENST00000296129 CYP3A7P24462 503 aa17.77■□□□□ 0.44
CDCP1-201ENST00000296129 BTKQ06187 659 aa17.77■□□□□ 0.44
CDCP1-201ENST00000296129 SCUBE3Q8IX30 993 aa17.77■□□□□ 0.44
CDCP1-201ENST00000296129 YME1L1Q96TA2 773 aa17.77■□□□□ 0.44
CDCP1-201ENST00000296129 PKD2L2Q9NZM6 624 aa17.77■□□□□ 0.44
CDCP1-201ENST00000296129 AKR1A1P14550 325 aa17.77■□□□□ 0.44
CDCP1-201ENST00000296129 NUDT2P50583 147 aa17.77■□□□□ 0.44
CDCP1-201ENST00000296129 OR9Q1Q8NGQ5 310 aa17.77■□□□□ 0.44
CDCP1-201ENST00000296129 H3BQF6 201 aa17.77■□□□□ 0.43
CDCP1-201ENST00000296129 CCND1P24385 295 aa17.77■□□□□ 0.43
CDCP1-201ENST00000296129 RPL21P46778 160 aaKnown RBP17.77■□□□□ 0.43
CDCP1-201ENST00000296129 BMPR2Q13873 1038 aa17.77■□□□□ 0.43
CDCP1-201ENST00000296129 FLOT2Q14254 428 aa17.77■□□□□ 0.43
CDCP1-201ENST00000296129 SDE2Q6IQ49 451 aa17.77■□□□□ 0.43
CDCP1-201ENST00000296129 BTNL9Q6UXG8 535 aa17.77■□□□□ 0.43
CDCP1-201ENST00000296129 NLRP9Q7RTR0 991 aa17.77■□□□□ 0.43
CDCP1-201ENST00000296129 RIOX2Q8IUF8 465 aa17.77■□□□□ 0.43
CDCP1-201ENST00000296129 GALNT4Q8N4A0 578 aa17.77■□□□□ 0.43
CDCP1-201ENST00000296129 CYGBQ8WWM9 190 aa17.77■□□□□ 0.43
CDCP1-201ENST00000296129 OTULINQ96BN8 352 aa17.77■□□□□ 0.43
CDCP1-201ENST00000296129 OTUB1Q96FW1 271 aaPredicted RBP17.77■□□□□ 0.43
CDCP1-201ENST00000296129 VCPIP1Q96JH7 1222 aa17.77■□□□□ 0.43
CDCP1-201ENST00000296129 DACH2Q96NX9 599 aa17.77■□□□□ 0.43
CDCP1-201ENST00000296129 TLR10Q9BXR5 811 aa17.77■□□□□ 0.43
CDCP1-201ENST00000296129 SEMA4AQ9H3S1 761 aa17.77■□□□□ 0.43
CDCP1-201ENST00000296129 CYP39A1Q9NYL5 469 aa17.77■□□□□ 0.43
CDCP1-201ENST00000296129 VPS28Q9UK41 221 aa17.77■□□□□ 0.43
CDCP1-201ENST00000296129 RIPK2O43353 540 aa17.77■□□□□ 0.43
CDCP1-201ENST00000296129 ALDH2P05091 517 aa17.77■□□□□ 0.43
CDCP1-201ENST00000296129 ITIH4Q14624 930 aa17.77■□□□□ 0.43
CDCP1-201ENST00000296129 LRRC4BQ9NT99 713 aa17.77■□□□□ 0.43
CDCP1-201ENST00000296129 CES2O00748 559 aa17.76■□□□□ 0.43
CDCP1-201ENST00000296129 FKBP9O95302 570 aa17.76■□□□□ 0.43
CDCP1-201ENST00000296129 PAEPP09466 180 aa17.76■□□□□ 0.43
CDCP1-201ENST00000296129 AXLP30530 894 aa17.76■□□□□ 0.43
CDCP1-201ENST00000296129 SERPINB5P36952 375 aa17.76■□□□□ 0.43
CDCP1-201ENST00000296129 TRIP10Q15642 601 aa17.76■□□□□ 0.43
CDCP1-201ENST00000296129 AARS2Q5JTZ9 985 aaKnown RBP17.76■□□□□ 0.43
CDCP1-201ENST00000296129 FKBP9P1Q75LS8 142 aa17.76■□□□□ 0.43
CDCP1-201ENST00000296129 ZDHHC17Q8IUH5 632 aa17.76■□□□□ 0.43
CDCP1-201ENST00000296129 TLR8Q9NR97 1041 aaKnown RBP17.76■□□□□ 0.43
CDCP1-201ENST00000296129 VANGL2Q9ULK5 521 aa17.76■□□□□ 0.43
CDCP1-201ENST00000296129 V9GYQ6 96 aa17.76■□□□□ 0.43
CDCP1-201ENST00000296129 TBKBP1A7MCY6 615 aa17.76■□□□□ 0.43
CDCP1-201ENST00000296129 PPP3CAQ08209 521 aa17.76■□□□□ 0.43
CDCP1-201ENST00000296129 TTLL9Q3SXZ7 439 aa17.76■□□□□ 0.43
CDCP1-201ENST00000296129 SLC2A14Q8TDB8 520 aa17.76■□□□□ 0.43
CDCP1-201ENST00000296129 DDI1Q8WTU0 396 aa17.76■□□□□ 0.43
CDCP1-201ENST00000296129 NMRK2Q9NPI5 230 aa17.76■□□□□ 0.43
CDCP1-201ENST00000296129 ARHGAP26Q9UNA1 814 aa17.76■□□□□ 0.43
CDCP1-201ENST00000296129 ASTN1O14525 1302 aa17.76■□□□□ 0.43
CDCP1-201ENST00000296129 MROH7Q68CQ1 1323 aa17.76■□□□□ 0.43
CDCP1-201ENST00000296129 ATRNO75882 1429 aa17.76■□□□□ 0.43
CDCP1-201ENST00000296129 FAM237AA0A1B0GTK4 181 aa17.76■□□□□ 0.43
CDCP1-201ENST00000296129 VPS26AO75436 327 aa17.76■□□□□ 0.43
CDCP1-201ENST00000296129 RARAP10276 462 aa17.76■□□□□ 0.43
CDCP1-201ENST00000296129 MED21Q13503 144 aa17.76■□□□□ 0.43
CDCP1-201ENST00000296129 CELF3Q5SZQ8 465 aaKnown RBP17.76■□□□□ 0.43
CDCP1-201ENST00000296129 PPP4R4Q6NUP7 873 aa17.76■□□□□ 0.43
CDCP1-201ENST00000296129 CYP4F12Q9HCS2 524 aa17.76■□□□□ 0.43
CDCP1-201ENST00000296129 TTLL13PA6NNM8 815 aa17.76■□□□□ 0.43
CDCP1-201ENST00000296129 KLRC4O43908 158 aa17.76■□□□□ 0.43
CDCP1-201ENST00000296129 DNAJB2P25686 324 aa17.76■□□□□ 0.43
CDCP1-201ENST00000296129 DGKZQ13574 1117 aa17.76■□□□□ 0.43
CDCP1-201ENST00000296129 SMARCD1Q96GM5 515 aa17.76■□□□□ 0.43
CDCP1-201ENST00000296129 YIPF2Q9BWQ6 316 aa17.76■□□□□ 0.43
CDCP1-201ENST00000296129 KDM4FA0A1W2PPD8 638 aa17.75■□□□□ 0.43
CDCP1-201ENST00000296129 CALCAP01258 141 aa17.75■□□□□ 0.43
CDCP1-201ENST00000296129 HSPA1AP0DMV8 641 aaKnown RBP17.75■□□□□ 0.43
CDCP1-201ENST00000296129 HSPA1BP0DMV9 641 aaKnown RBP17.75■□□□□ 0.43
CDCP1-201ENST00000296129 EPHB3P54753 998 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms