RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 COG5Q9UP83 839 aa13.89□□□□□ -0.19
HPS3-201ENST00000296051 V9GYQ6 96 aa13.89□□□□□ -0.19
HPS3-201ENST00000296051 SDK1Q7Z5N4 2213 aa13.89□□□□□ -0.19
HPS3-201ENST00000296051 F8VP50 259 aa13.89□□□□□ -0.19
HPS3-201ENST00000296051 TGFB1I1O43294 461 aa13.89□□□□□ -0.19
HPS3-201ENST00000296051 PGM3O95394 542 aa13.89□□□□□ -0.19
HPS3-201ENST00000296051 PGM5Q15124 567 aa13.89□□□□□ -0.19
HPS3-201ENST00000296051 CLEC16AQ2KHT3 1053 aa13.89□□□□□ -0.19
HPS3-201ENST00000296051 ANO4Q32M45 955 aa13.89□□□□□ -0.19
HPS3-201ENST00000296051 TTC39BQ5VTQ0 682 aaPredicted RBP13.89□□□□□ -0.19
HPS3-201ENST00000296051 ARMC3Q5W041 872 aa13.89□□□□□ -0.19
HPS3-201ENST00000296051 SPOCD1Q6ZMY3 1216 aa13.89□□□□□ -0.19
HPS3-201ENST00000296051 DEFB107AQ8IZN7 70 aa13.89□□□□□ -0.19
HPS3-201ENST00000296051 LRRC57Q8N9N7 239 aa13.89□□□□□ -0.19
HPS3-201ENST00000296051 PDGFDQ9GZP0 370 aaPredicted RBP13.89□□□□□ -0.19
HPS3-201ENST00000296051 DRC3Q9H069 523 aa13.89□□□□□ -0.19
HPS3-201ENST00000296051 PCYOX1Q9UHG3 505 aa13.89□□□□□ -0.19
HPS3-201ENST00000296051 DPPA5A6NC42 116 aa13.88□□□□□ -0.19
HPS3-201ENST00000296051 RBAK-RBAKDNI3L0D1 243 aa13.88□□□□□ -0.19
HPS3-201ENST00000296051 DNALI1O14645 258 aaPredicted RBP13.88□□□□□ -0.19
HPS3-201ENST00000296051 ODC1P11926 461 aa13.88□□□□□ -0.19
HPS3-201ENST00000296051 STILQ15468 1287 aa13.88□□□□□ -0.19
HPS3-201ENST00000296051 LRRN4Q8WUT4 740 aa13.88□□□□□ -0.19
HPS3-201ENST00000296051 CMTM5Q96DZ9 223 aa13.88□□□□□ -0.19
HPS3-201ENST00000296051 UNKQ9C0B0 810 aaKnown RBP13.88□□□□□ -0.19
HPS3-201ENST00000296051 VTA1Q9NP79 307 aa13.88□□□□□ -0.19
HPS3-201ENST00000296051 CLIC5Q9NZA1 410 aa13.88□□□□□ -0.19
HPS3-201ENST00000296051 AKAP10O43572 662 aa13.88□□□□□ -0.19
HPS3-201ENST00000296051 MGRN1O60291 552 aa13.88□□□□□ -0.19
HPS3-201ENST00000296051 LCA5LO95447 670 aa13.88□□□□□ -0.19
HPS3-201ENST00000296051 HSPA8P11142 646 aaKnown RBP13.88□□□□□ -0.19
HPS3-201ENST00000296051 MFSD10Q14728 455 aa13.88□□□□□ -0.19
HPS3-201ENST00000296051 COBLL1Q53SF7 1204 aa13.88□□□□□ -0.19
HPS3-201ENST00000296051 FRA10AC1Q70Z53 315 aa13.88□□□□□ -0.19
HPS3-201ENST00000296051 COPS5Q92905 334 aa13.88□□□□□ -0.19
HPS3-201ENST00000296051 NIF3L1Q9GZT8 377 aa13.88□□□□□ -0.19
HPS3-201ENST00000296051 R3HDM2Q9Y2K5 976 aaKnown RBP13.88□□□□□ -0.19
HPS3-201ENST00000296051 EXTL3O43909 919 aa13.88□□□□□ -0.19
HPS3-201ENST00000296051 ELNP15502 786 aa13.88□□□□□ -0.19
HPS3-201ENST00000296051 AVPR1AP37288 418 aa13.88□□□□□ -0.19
HPS3-201ENST00000296051 EFTUD2Q15029 972 aaKnown RBP eCLIP13.88□□□□□ -0.19
HPS3-201ENST00000296051 TDRD10Q5VZ19 366 aaKnown RBP13.88□□□□□ -0.19
HPS3-201ENST00000296051 TAF2Q6P1X5 1199 aa13.88□□□□□ -0.19
HPS3-201ENST00000296051 OTOP1Q7RTM1 612 aa13.88□□□□□ -0.19
HPS3-201ENST00000296051 ZNF184Q99676 751 aaPredicted RBP13.88□□□□□ -0.19
HPS3-201ENST00000296051 KLHL2O95198 593 aa13.88□□□□□ -0.19
HPS3-201ENST00000296051 PSMG1O95456 288 aa13.88□□□□□ -0.19
HPS3-201ENST00000296051 KPNA2P52292 529 aaKnown RBP13.88□□□□□ -0.19
HPS3-201ENST00000296051 EML3Q32P44 896 aa13.88□□□□□ -0.19
HPS3-201ENST00000296051 USP13Q92995 863 aaPredicted RBP13.88□□□□□ -0.19
HPS3-201ENST00000296051 OXNAD1Q96HP4 312 aaPredicted RBP13.88□□□□□ -0.19
HPS3-201ENST00000296051 SIGLEC1Q9BZZ2 1709 aa13.87□□□□□ -0.19
HPS3-201ENST00000296051 CYB561D2O14569 222 aa13.87□□□□□ -0.19
HPS3-201ENST00000296051 MT-CO1P00395 513 aa13.87□□□□□ -0.19
HPS3-201ENST00000296051 AKAP5P24588 427 aa13.87□□□□□ -0.19
HPS3-201ENST00000296051 KLRC2P26717 231 aa13.87□□□□□ -0.19
HPS3-201ENST00000296051 CYLC2Q14093 348 aaPredicted RBP13.87□□□□□ -0.19
HPS3-201ENST00000296051 LACTB2Q53H82 288 aaPredicted RBP13.87□□□□□ -0.19
HPS3-201ENST00000296051 GJC2Q5T442 439 aaPredicted RBP13.87□□□□□ -0.19
HPS3-201ENST00000296051 EXD1Q8NHP7 514 aa13.87□□□□□ -0.19
HPS3-201ENST00000296051 ART4Q93070 314 aa13.87□□□□□ -0.19
HPS3-201ENST00000296051 PBXIP1Q96AQ6 731 aa13.87□□□□□ -0.19
HPS3-201ENST00000296051 GRID1Q9ULK0 1009 aa13.87□□□□□ -0.19
HPS3-201ENST00000296051 PSTPIP1O43586 416 aa13.87□□□□□ -0.19
HPS3-201ENST00000296051 ZMPSTE24O75844 475 aa13.87□□□□□ -0.19
HPS3-201ENST00000296051 CLPTM1O96005 669 aa13.87□□□□□ -0.19
HPS3-201ENST00000296051 MYL4P12829 197 aa13.87□□□□□ -0.19
HPS3-201ENST00000296051 PNPLA4P41247 253 aa13.87□□□□□ -0.19
HPS3-201ENST00000296051 DGKZQ13574 1117 aa13.87□□□□□ -0.19
HPS3-201ENST00000296051 C16orf46Q6P387 395 aa13.87□□□□□ -0.19
HPS3-201ENST00000296051 KLC3Q6P597 504 aa13.87□□□□□ -0.19
HPS3-201ENST00000296051 ACOT1Q86TX2 421 aa13.87□□□□□ -0.19
HPS3-201ENST00000296051 REPS2Q8NFH8 660 aa13.87□□□□□ -0.19
HPS3-201ENST00000296051 CEP41Q9BYV8 373 aa13.87□□□□□ -0.19
HPS3-201ENST00000296051 MTMR12Q9C0I1 747 aa13.87□□□□□ -0.19
HPS3-201ENST00000296051 TASP1Q9H6P5 420 aa13.87□□□□□ -0.19
HPS3-201ENST00000296051 GSTT1P30711 240 aa13.87□□□□□ -0.19
HPS3-201ENST00000296051 GLRBP48167 497 aa13.87□□□□□ -0.19
HPS3-201ENST00000296051 SHROOM1Q2M3G4 852 aaPredicted RBP13.87□□□□□ -0.19
HPS3-201ENST00000296051 NUP93Q8N1F7 819 aa13.87□□□□□ -0.19
HPS3-201ENST00000296051 MPP4Q96JB8 637 aa13.87□□□□□ -0.19
HPS3-201ENST00000296051 EGFL8Q99944 293 aa13.87□□□□□ -0.19
HPS3-201ENST00000296051 MID2Q9UJV3 735 aa13.87□□□□□ -0.19
HPS3-201ENST00000296051 AJAP1Q9UKB5 411 aaPredicted RBP13.87□□□□□ -0.19
HPS3-201ENST00000296051 DDX3YO15523 660 aaKnown RBP13.87□□□□□ -0.19
HPS3-201ENST00000296051 PSEN2P49810 448 aa13.87□□□□□ -0.19
HPS3-201ENST00000296051 DRG2P55039 364 aaKnown RBP13.87□□□□□ -0.19
HPS3-201ENST00000296051 SLC25A3Q00325 362 aa13.87□□□□□ -0.19
HPS3-201ENST00000296051 MAPRE1Q15691 268 aaKnown RBP13.87□□□□□ -0.19
HPS3-201ENST00000296051 IRGCQ6NXR0 463 aa13.87□□□□□ -0.19
HPS3-201ENST00000296051 OTOAQ7RTW8 1153 aa13.87□□□□□ -0.19
HPS3-201ENST00000296051 SRPK1Q96SB4 655 aaKnown RBP13.87□□□□□ -0.19
HPS3-201ENST00000296051 HAUS8Q9BT25 410 aa13.87□□□□□ -0.19
HPS3-201ENST00000296051 C17orf75Q9HAS0 396 aa13.87□□□□□ -0.19
HPS3-201ENST00000296051 PEX1O43933 1283 aa13.86□□□□□ -0.19
HPS3-201ENST00000296051 MSCO60682 206 aa13.86□□□□□ -0.19
HPS3-201ENST00000296051 PROCP04070 461 aa13.86□□□□□ -0.19
HPS3-201ENST00000296051 TAC1P20366 129 aa13.86□□□□□ -0.19
HPS3-201ENST00000296051 RARRES1P49788 294 aa13.86□□□□□ -0.19
HPS3-201ENST00000296051 CDH18Q13634 790 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms