RNA–Protein interactions for RNA: ENST00000295522.3

CLDN1-201, Transcript of claudin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-201ENST00000295522 KRT39Q6A163 491 aa10.54□□□□□ -0.72
CLDN1-201ENST00000295522 SPOPLQ6IQ16 392 aa10.54□□□□□ -0.72
CLDN1-201ENST00000295522 HELQQ8TDG4 1101 aa10.54□□□□□ -0.72
CLDN1-201ENST00000295522 CPT1BQ92523 772 aa10.54□□□□□ -0.72
CLDN1-201ENST00000295522 MRPL47Q9HD33 250 aaKnown RBP10.54□□□□□ -0.72
CLDN1-201ENST00000295522 PSMD13Q9UNM6 376 aa10.54□□□□□ -0.72
CLDN1-201ENST00000295522 PCDHB4Q9Y5E5 795 aa10.54□□□□□ -0.72
CLDN1-201ENST00000295522 SNX13Q9Y5W8 968 aa10.54□□□□□ -0.72
CLDN1-201ENST00000295522 PSMD12O00232 456 aaPredicted RBP10.54□□□□□ -0.72
CLDN1-201ENST00000295522 RIMBP2O15034 1052 aa10.54□□□□□ -0.72
CLDN1-201ENST00000295522 SERPINB7O75635 380 aa10.54□□□□□ -0.72
CLDN1-201ENST00000295522 MTA2O94776 668 aa10.54□□□□□ -0.72
CLDN1-201ENST00000295522 CCDC130P13994 396 aa10.54□□□□□ -0.72
CLDN1-201ENST00000295522 EIF3EP60228 445 aaKnown RBP10.54□□□□□ -0.72
CLDN1-201ENST00000295522 C16orf86Q6ZW13 317 aa10.54□□□□□ -0.72
CLDN1-201ENST00000295522 CENPSQ8N2Z9 138 aa10.54□□□□□ -0.72
CLDN1-201ENST00000295522 MARVELD2Q8N4S9 558 aa10.54□□□□□ -0.72
CLDN1-201ENST00000295522 EXD1Q8NHP7 514 aa10.54□□□□□ -0.72
CLDN1-201ENST00000295522 RMND5BQ96G75 393 aaPredicted RBP10.54□□□□□ -0.72
CLDN1-201ENST00000295522 VPS50Q96JG6 964 aa10.54□□□□□ -0.72
CLDN1-201ENST00000295522 VPS51Q9UID3 782 aa10.54□□□□□ -0.72
CLDN1-201ENST00000295522 TMEM150BA6NC51 233 aa10.54□□□□□ -0.72
CLDN1-201ENST00000295522 A8MU76 341 aa10.54□□□□□ -0.72
CLDN1-201ENST00000295522 H7C0C1 242 aa10.54□□□□□ -0.72
CLDN1-201ENST00000295522 ITGAXP20702 1163 aa10.54□□□□□ -0.72
CLDN1-201ENST00000295522 HMOX2P30519 316 aa10.54□□□□□ -0.72
CLDN1-201ENST00000295522 ATP5OP48047 213 aa10.54□□□□□ -0.72
CLDN1-201ENST00000295522 XIAPP98170 497 aa10.54□□□□□ -0.72
CLDN1-201ENST00000295522 BNIP3Q12983 259 aa10.54□□□□□ -0.72
CLDN1-201ENST00000295522 NR1D2Q14995 579 aa10.54□□□□□ -0.72
CLDN1-201ENST00000295522 HSF5Q4G112 596 aaPredicted RBP10.54□□□□□ -0.72
CLDN1-201ENST00000295522 TTC39BQ5VTQ0 682 aaPredicted RBP10.54□□□□□ -0.72
CLDN1-201ENST00000295522 DARS2Q6PI48 645 aaKnown RBP10.54□□□□□ -0.72
CLDN1-201ENST00000295522 CHSY1Q86X52 802 aa10.54□□□□□ -0.72
CLDN1-201ENST00000295522 FBXL13Q8NEE6 735 aa10.54□□□□□ -0.72
CLDN1-201ENST00000295522 PLEKHO2Q8TD55 490 aa10.54□□□□□ -0.72
CLDN1-201ENST00000295522 GPRC5CQ9NQ84 441 aa10.54□□□□□ -0.72
CLDN1-201ENST00000295522 EPS15L1Q9UBC2 864 aa10.54□□□□□ -0.72
CLDN1-201ENST00000295522 ZC3H7BQ9UGR2 993 aaKnown RBP10.54□□□□□ -0.72
CLDN1-201ENST00000295522 CDC14AQ9UNH5 594 aa10.54□□□□□ -0.72
CLDN1-201ENST00000295522 TBC1D30Q9Y2I9 924 aa10.54□□□□□ -0.72
CLDN1-201ENST00000295522 GPC6Q9Y625 555 aaPredicted RBP10.54□□□□□ -0.72
CLDN1-201ENST00000295522 G3V3G9 751 aa10.53□□□□□ -0.72
CLDN1-201ENST00000295522 PSTPIP1O43586 416 aa10.53□□□□□ -0.72
CLDN1-201ENST00000295522 ADAM23O75077 832 aa10.53□□□□□ -0.72
CLDN1-201ENST00000295522 CPOXP36551 454 aa10.53□□□□□ -0.72
CLDN1-201ENST00000295522 GNA12Q03113 381 aa10.53□□□□□ -0.72
CLDN1-201ENST00000295522 TRAF2Q12933 501 aa10.53□□□□□ -0.72
CLDN1-201ENST00000295522 ART3Q13508 389 aa10.53□□□□□ -0.72
CLDN1-201ENST00000295522 SNRNP35Q16560 246 aaKnown RBP10.53□□□□□ -0.72
CLDN1-201ENST00000295522 CEP55Q53EZ4 464 aa10.53□□□□□ -0.72
CLDN1-201ENST00000295522 WDR44Q5JSH3 913 aa10.53□□□□□ -0.72
CLDN1-201ENST00000295522 DCAF8Q5TAQ9 597 aa10.53□□□□□ -0.72
CLDN1-201ENST00000295522 SPOCD1Q6ZMY3 1216 aa10.53□□□□□ -0.72
CLDN1-201ENST00000295522 PIWIL2Q8TC59 973 aaKnown RBP10.53□□□□□ -0.72
CLDN1-201ENST00000295522 SHC3Q92529 594 aa10.53□□□□□ -0.72
CLDN1-201ENST00000295522 HSPH1Q92598 858 aa10.53□□□□□ -0.72
CLDN1-201ENST00000295522 MARK4Q96L34 752 aa10.53□□□□□ -0.72
CLDN1-201ENST00000295522 SERPINI1Q99574 410 aa10.53□□□□□ -0.72
CLDN1-201ENST00000295522 EPB41L1Q9H4G0 881 aa10.53□□□□□ -0.72
CLDN1-201ENST00000295522 PPCSQ9HAB8 311 aa10.53□□□□□ -0.72
CLDN1-201ENST00000295522 C20orf96Q9NUD7 363 aaPredicted RBP10.53□□□□□ -0.72
CLDN1-201ENST00000295522 SF3B1O75533 1304 aaKnown RBP eCLIP10.53□□□□□ -0.72
CLDN1-201ENST00000295522 A0A1W2PPW3 197 aa10.53□□□□□ -0.72
CLDN1-201ENST00000295522 STX16-NPEPL1H3BU86 382 aa10.53□□□□□ -0.72
CLDN1-201ENST00000295522 ADRB2P07550 413 aa10.53□□□□□ -0.72
CLDN1-201ENST00000295522 P4HA1P13674 534 aa10.53□□□□□ -0.72
CLDN1-201ENST00000295522 UGT1A6P19224 532 aa10.53□□□□□ -0.72
CLDN1-201ENST00000295522 UGT1A1P22309 533 aa10.53□□□□□ -0.72
CLDN1-201ENST00000295522 UGT1A4P22310 534 aa10.53□□□□□ -0.72
CLDN1-201ENST00000295522 RPL22P35268 128 aaKnown RBP10.53□□□□□ -0.72
CLDN1-201ENST00000295522 UGT1A3P35503 534 aa10.53□□□□□ -0.72
CLDN1-201ENST00000295522 UGT1A5P35504 534 aa10.53□□□□□ -0.72
CLDN1-201ENST00000295522 ETV4P43268 484 aa10.53□□□□□ -0.72
CLDN1-201ENST00000295522 BCAP31P51572 246 aa10.53□□□□□ -0.72
CLDN1-201ENST00000295522 CSE1LP55060 971 aaKnown RBP10.53□□□□□ -0.72
CLDN1-201ENST00000295522 PPP2R5DQ14738 602 aa10.53□□□□□ -0.72
CLDN1-201ENST00000295522 TGFBIQ15582 683 aa10.53□□□□□ -0.72
CLDN1-201ENST00000295522 TBCCQ15814 346 aa10.53□□□□□ -0.72
CLDN1-201ENST00000295522 ANO4Q32M45 955 aa10.53□□□□□ -0.72
CLDN1-201ENST00000295522 FAM102BQ5T8I3 360 aa10.53□□□□□ -0.72
CLDN1-201ENST00000295522 PADI6Q6TGC4 694 aa10.53□□□□□ -0.72
CLDN1-201ENST00000295522 Q6ZNX1 250 aa10.53□□□□□ -0.72
CLDN1-201ENST00000295522 C1orf186Q6ZWK4 172 aa10.53□□□□□ -0.72
CLDN1-201ENST00000295522 DPH6Q7L8W6 267 aa10.53□□□□□ -0.72
CLDN1-201ENST00000295522 SLC26A11Q86WA9 606 aa10.53□□□□□ -0.72
CLDN1-201ENST00000295522 AHI1Q8N157 1196 aa10.53□□□□□ -0.72
CLDN1-201ENST00000295522 HPS1Q92902 700 aa10.53□□□□□ -0.72
CLDN1-201ENST00000295522 ACCSQ96QU6 501 aa10.53□□□□□ -0.72
CLDN1-201ENST00000295522 PCDH9Q9HC56 1237 aa10.53□□□□□ -0.72
CLDN1-201ENST00000295522 RAB6BQ9NRW1 208 aa10.53□□□□□ -0.72
CLDN1-201ENST00000295522 SACM1LQ9NTJ5 587 aa10.53□□□□□ -0.72
CLDN1-201ENST00000295522 TBCCD1Q9NVR7 557 aa10.53□□□□□ -0.72
CLDN1-201ENST00000295522 MYRFQ9Y2G1 1151 aa10.53□□□□□ -0.72
CLDN1-201ENST00000295522 FADS3Q9Y5Q0 445 aa10.53□□□□□ -0.72
CLDN1-201ENST00000295522 CROCCQ5TZA2 2017 aa10.53□□□□□ -0.72
CLDN1-201ENST00000295522 TPST1O60507 370 aa10.53□□□□□ -0.72
CLDN1-201ENST00000295522 APRTP07741 180 aa10.53□□□□□ -0.72
CLDN1-201ENST00000295522 ADSSP30520 456 aa10.53□□□□□ -0.72
CLDN1-201ENST00000295522 SLC1A6P48664 564 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms