RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 USP13Q92995 863 aaPredicted RBP12.8□□□□□ -0.36
SLX4-201ENST00000294008 SPG21Q9NZD8 308 aa12.8□□□□□ -0.36
SLX4-201ENST00000294008 KIAA1257Q9ULG3 409 aa12.8□□□□□ -0.36
SLX4-201ENST00000294008 ANGPT4Q9Y264 503 aa12.8□□□□□ -0.36
SLX4-201ENST00000294008 KDM5BQ9UGL1 1544 aa12.8□□□□□ -0.36
SLX4-201ENST00000294008 GSAPA4D1B5 854 aa12.8□□□□□ -0.36
SLX4-201ENST00000294008 F5H6K3 240 aa12.8□□□□□ -0.36
SLX4-201ENST00000294008 PTPN12Q05209 780 aaKnown RBP12.8□□□□□ -0.36
SLX4-201ENST00000294008 KLRC3Q07444 240 aa12.8□□□□□ -0.36
SLX4-201ENST00000294008 PTAR1Q7Z6K3 402 aaPredicted RBP12.8□□□□□ -0.36
SLX4-201ENST00000294008 APOL2Q9BQE5 337 aa12.8□□□□□ -0.36
SLX4-201ENST00000294008 ACTR8Q9H981 624 aa12.8□□□□□ -0.36
SLX4-201ENST00000294008 NT5MQ9NPB1 228 aa12.8□□□□□ -0.36
SLX4-201ENST00000294008 COMMD9Q9P000 198 aa12.8□□□□□ -0.36
SLX4-201ENST00000294008 ENTPD4Q9Y227 616 aa12.8□□□□□ -0.36
SLX4-201ENST00000294008 EIF3DO15371 548 aaKnown RBP eCLIP12.8□□□□□ -0.36
SLX4-201ENST00000294008 H2AFXP16104 143 aaPredicted RBP12.8□□□□□ -0.36
SLX4-201ENST00000294008 BNC1Q01954 994 aa12.8□□□□□ -0.36
SLX4-201ENST00000294008 BTG3Q14201 252 aaPredicted RBP12.8□□□□□ -0.36
SLX4-201ENST00000294008 TTC39BQ5VTQ0 682 aaPredicted RBP12.8□□□□□ -0.36
SLX4-201ENST00000294008 FAM71DQ8N9W8 422 aa12.8□□□□□ -0.36
SLX4-201ENST00000294008 TMA7Q9Y2S6 64 aaKnown RBP12.8□□□□□ -0.36
SLX4-201ENST00000294008 PSMD11O00231 422 aa12.79□□□□□ -0.36
SLX4-201ENST00000294008 PSIP1O75475 530 aaKnown RBP12.79□□□□□ -0.36
SLX4-201ENST00000294008 TGM2P21980 687 aa12.79□□□□□ -0.36
SLX4-201ENST00000294008 HSPA9P38646 679 aaKnown RBP12.79□□□□□ -0.36
SLX4-201ENST00000294008 USP41Q3LFD5 358 aa12.79□□□□□ -0.36
SLX4-201ENST00000294008 RBM23Q86U06 439 aaKnown RBP12.79□□□□□ -0.36
SLX4-201ENST00000294008 SAPCD2Q86UD0 394 aa12.79□□□□□ -0.36
SLX4-201ENST00000294008 TRAPPC5Q8IUR0 188 aa12.79□□□□□ -0.36
SLX4-201ENST00000294008 APLFQ8IW19 511 aaPredicted RBP12.79□□□□□ -0.36
SLX4-201ENST00000294008 CFAP73A6NFT4 308 aa12.79□□□□□ -0.36
SLX4-201ENST00000294008 SCAMP3O14828 347 aaKnown RBP12.79□□□□□ -0.36
SLX4-201ENST00000294008 EXTL3O43909 919 aa12.79□□□□□ -0.36
SLX4-201ENST00000294008 HNF4AP41235 474 aa12.79□□□□□ -0.36
SLX4-201ENST00000294008 PTPN9P43378 593 aa12.79□□□□□ -0.36
SLX4-201ENST00000294008 PSMD4P55036 377 aaKnown RBP12.79□□□□□ -0.36
SLX4-201ENST00000294008 COLEC12Q5KU26 742 aa12.79□□□□□ -0.36
SLX4-201ENST00000294008 SUSD4Q5VX71 490 aa12.79□□□□□ -0.36
SLX4-201ENST00000294008 C3orf62Q6ZUJ4 267 aa12.79□□□□□ -0.36
SLX4-201ENST00000294008 PARP9Q8IXQ6 854 aa12.79□□□□□ -0.36
SLX4-201ENST00000294008 PI4K2AQ9BTU6 479 aa12.79□□□□□ -0.36
SLX4-201ENST00000294008 HERC5Q9UII4 1024 aaKnown RBP12.79□□□□□ -0.36
SLX4-201ENST00000294008 WWP2O00308 870 aa12.79□□□□□ -0.36
SLX4-201ENST00000294008 IFNA14P01570 189 aa12.79□□□□□ -0.36
SLX4-201ENST00000294008 TSPAN19P0C672 248 aa12.79□□□□□ -0.36
SLX4-201ENST00000294008 CHRNB3Q05901 458 aa12.79□□□□□ -0.36
SLX4-201ENST00000294008 TRAP1Q12931 704 aaKnown RBP12.79□□□□□ -0.36
SLX4-201ENST00000294008 RAP1GAP2Q684P5 730 aa12.79□□□□□ -0.36
SLX4-201ENST00000294008 DENND1BQ6P3S1 775 aa12.79□□□□□ -0.36
SLX4-201ENST00000294008 URB2Q14146 1524 aaKnown RBP12.79□□□□□ -0.36
SLX4-201ENST00000294008 ATMINO43313 823 aaPredicted RBP12.79□□□□□ -0.36
SLX4-201ENST00000294008 CETPP11597 493 aa12.79□□□□□ -0.36
SLX4-201ENST00000294008 MYL12AP19105 171 aa12.79□□□□□ -0.36
SLX4-201ENST00000294008 CBX5P45973 191 aa12.79□□□□□ -0.36
SLX4-201ENST00000294008 GALK1P51570 392 aa12.79□□□□□ -0.36
SLX4-201ENST00000294008 BRINP2Q9C0B6 783 aa12.79□□□□□ -0.36
SLX4-201ENST00000294008 ZSWIM6Q9HCJ5 1215 aa12.79□□□□□ -0.36
SLX4-201ENST00000294008 UBP1Q9NZI7 540 aa12.79□□□□□ -0.36
SLX4-201ENST00000294008 RPH3AQ9Y2J0 694 aaPredicted RBP12.79□□□□□ -0.36
SLX4-201ENST00000294008 ACADLP28330 430 aa12.79□□□□□ -0.36
SLX4-201ENST00000294008 OTUD4Q01804 1114 aaKnown RBP12.79□□□□□ -0.36
SLX4-201ENST00000294008 SETMARQ53H47 684 aaPredicted RBP12.79□□□□□ -0.36
SLX4-201ENST00000294008 PACS2Q86VP3 889 aa12.79□□□□□ -0.36
SLX4-201ENST00000294008 TMEM159Q96B96 161 aa12.79□□□□□ -0.36
SLX4-201ENST00000294008 CMTM5Q96DZ9 223 aa12.79□□□□□ -0.36
SLX4-201ENST00000294008 AGPAT1Q99943 283 aa12.79□□□□□ -0.36
SLX4-201ENST00000294008 UBE2Q2LH0YL09 131 aa12.78□□□□□ -0.36
SLX4-201ENST00000294008 BAIAP3O94812 1187 aa12.78□□□□□ -0.36
SLX4-201ENST00000294008 CCT3P49368 545 aaKnown RBP12.78□□□□□ -0.36
SLX4-201ENST00000294008 RPS6KA3P51812 740 aa12.78□□□□□ -0.36
SLX4-201ENST00000294008 MRNIPQ6NTE8 343 aa12.78□□□□□ -0.36
SLX4-201ENST00000294008 ZDHHC6Q9H6R6 413 aa12.78□□□□□ -0.36
SLX4-201ENST00000294008 PSMD9O00233 223 aa12.78□□□□□ -0.36
SLX4-201ENST00000294008 GPD1P21695 349 aa12.78□□□□□ -0.36
SLX4-201ENST00000294008 IL6STP40189 918 aaPredicted RBP12.78□□□□□ -0.36
SLX4-201ENST00000294008 BTN3A2P78410 334 aa12.78□□□□□ -0.36
SLX4-201ENST00000294008 DDR2Q16832 855 aa12.78□□□□□ -0.36
SLX4-201ENST00000294008 AGAP9Q5VTM2 703 aa12.78□□□□□ -0.36
SLX4-201ENST00000294008 SLC20A1Q8WUM9 679 aa12.78□□□□□ -0.36
SLX4-201ENST00000294008 ELMO1Q92556 727 aa12.78□□□□□ -0.36
SLX4-201ENST00000294008 SEMA4DQ92854 862 aa12.78□□□□□ -0.36
SLX4-201ENST00000294008 RACGAP1Q9H0H5 632 aa12.78□□□□□ -0.36
SLX4-201ENST00000294008 PIH1D3Q9NQM4 214 aaKnown RBP12.78□□□□□ -0.36
SLX4-201ENST00000294008 GPC6Q9Y625 555 aaPredicted RBP12.78□□□□□ -0.36
SLX4-201ENST00000294008 POMCP01189 267 aa12.78□□□□□ -0.36
SLX4-201ENST00000294008 LGALS3BPQ08380 585 aa12.78□□□□□ -0.36
SLX4-201ENST00000294008 EIF2S3LQ2VIR3 472 aaKnown RBP12.78□□□□□ -0.36
SLX4-201ENST00000294008 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.78□□□□□ -0.36
SLX4-201ENST00000294008 GRIN3AQ8TCU5 1115 aa12.78□□□□□ -0.36
SLX4-201ENST00000294008 HPDLQ96IR7 371 aa12.78□□□□□ -0.36
SLX4-201ENST00000294008 PANX2Q96RD6 677 aa12.78□□□□□ -0.36
SLX4-201ENST00000294008 GOLPH3Q9H4A6 298 aa12.78□□□□□ -0.36
SLX4-201ENST00000294008 MBD2Q9UBB5 411 aa12.78□□□□□ -0.36
SLX4-201ENST00000294008 AMACRQ9UHK6 382 aa12.78□□□□□ -0.36
SLX4-201ENST00000294008 AFF2P51816 1311 aa12.78□□□□□ -0.36
SLX4-201ENST00000294008 MYMKA6NI61 221 aa12.78□□□□□ -0.36
SLX4-201ENST00000294008 GPR182O15218 404 aa12.78□□□□□ -0.36
SLX4-201ENST00000294008 PRDX5P30044 214 aa12.78□□□□□ -0.36
SLX4-201ENST00000294008 NDUFV1P49821 464 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms