RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 ANKEF1Q9NU02 776 aa13.4□□□□□ -0.26
COL8A1-202ENST00000273342 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.4□□□□□ -0.26
COL8A1-202ENST00000273342 PNPOQ9NVS9 261 aa13.4□□□□□ -0.26
COL8A1-202ENST00000273342 APPL1Q9UKG1 709 aa13.4□□□□□ -0.26
COL8A1-202ENST00000273342 SLC4A7Q9Y6M7 1214 aa13.4□□□□□ -0.26
COL8A1-202ENST00000273342 SIPA1L1O43166 1804 aa13.4□□□□□ -0.26
COL8A1-202ENST00000273342 RFPL1O75677 317 aa13.4□□□□□ -0.26
COL8A1-202ENST00000273342 LYPLA2O95372 231 aa13.4□□□□□ -0.26
COL8A1-202ENST00000273342 YWHAZP63104 245 aaKnown RBP13.4□□□□□ -0.26
COL8A1-202ENST00000273342 GK3PQ14409 553 aa13.4□□□□□ -0.26
COL8A1-202ENST00000273342 HADHQ16836 314 aaKnown RBP13.4□□□□□ -0.26
COL8A1-202ENST00000273342 DNAL1Q4LDG9 190 aa13.4□□□□□ -0.26
COL8A1-202ENST00000273342 CASC4Q6P4E1 433 aa13.4□□□□□ -0.26
COL8A1-202ENST00000273342 FBXL19Q6PCT2 694 aa13.4□□□□□ -0.26
COL8A1-202ENST00000273342 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.4□□□□□ -0.26
COL8A1-202ENST00000273342 FAM172AQ8WUF8 416 aa13.4□□□□□ -0.26
COL8A1-202ENST00000273342 WNK4Q96J92 1243 aa13.4□□□□□ -0.26
COL8A1-202ENST00000273342 PGLYRP2Q96PD5 576 aa13.4□□□□□ -0.26
COL8A1-202ENST00000273342 PDCD2LQ9BRP1 358 aa13.4□□□□□ -0.26
COL8A1-202ENST00000273342 IFT122Q9HBG6 1241 aa13.4□□□□□ -0.26
COL8A1-202ENST00000273342 XAB2Q9HCS7 855 aaKnown RBP13.4□□□□□ -0.26
COL8A1-202ENST00000273342 CYP26B1Q9NR63 512 aa13.4□□□□□ -0.26
COL8A1-202ENST00000273342 GALNT8Q9NY28 637 aa13.4□□□□□ -0.26
COL8A1-202ENST00000273342 POLIQ9UNA4 740 aa13.4□□□□□ -0.26
COL8A1-202ENST00000273342 NFASCO94856 1347 aa13.4□□□□□ -0.26
COL8A1-202ENST00000273342 SPDYE2BA6NHP3 402 aa13.39□□□□□ -0.27
COL8A1-202ENST00000273342 SPDYE6P0CI01 402 aa13.39□□□□□ -0.27
COL8A1-202ENST00000273342 VAV1P15498 845 aa13.39□□□□□ -0.27
COL8A1-202ENST00000273342 HSPA1LP34931 641 aa13.39□□□□□ -0.27
COL8A1-202ENST00000273342 JAK3P52333 1124 aa13.39□□□□□ -0.27
COL8A1-202ENST00000273342 BAATQ14032 418 aaPredicted RBP13.39□□□□□ -0.27
COL8A1-202ENST00000273342 PDK3Q15120 406 aa13.39□□□□□ -0.27
COL8A1-202ENST00000273342 C15orf59Q2T9L4 293 aaPredicted RBP13.39□□□□□ -0.27
COL8A1-202ENST00000273342 SPDYE2Q495Y8 402 aa13.39□□□□□ -0.27
COL8A1-202ENST00000273342 SLC27A3Q5K4L6 730 aa13.39□□□□□ -0.27
COL8A1-202ENST00000273342 IYDQ6PHW0 289 aa13.39□□□□□ -0.27
COL8A1-202ENST00000273342 PDSS2Q86YH6 399 aa13.39□□□□□ -0.27
COL8A1-202ENST00000273342 TMEM174Q8WUU8 243 aa13.39□□□□□ -0.27
COL8A1-202ENST00000273342 AZIN2Q96A70 460 aa13.39□□□□□ -0.27
COL8A1-202ENST00000273342 ATXN7L3BQ96GX2 97 aa13.39□□□□□ -0.27
COL8A1-202ENST00000273342 CPXM1Q96SM3 734 aa13.39□□□□□ -0.27
COL8A1-202ENST00000273342 NTPCRQ9BSD7 190 aaKnown RBP13.39□□□□□ -0.27
COL8A1-202ENST00000273342 FEM1BQ9UK73 627 aa13.39□□□□□ -0.27
COL8A1-202ENST00000273342 TTLL3Q9Y4R7 772 aa13.39□□□□□ -0.27
COL8A1-202ENST00000273342 RBL1P28749 1068 aa13.39□□□□□ -0.27
COL8A1-202ENST00000273342 CPOXP36551 454 aa13.39□□□□□ -0.27
COL8A1-202ENST00000273342 CCNIQ14094 377 aa13.39□□□□□ -0.27
COL8A1-202ENST00000273342 FASTKD1Q53R41 847 aaKnown RBP13.39□□□□□ -0.27
COL8A1-202ENST00000273342 LRRC38Q5VT99 294 aa13.39□□□□□ -0.27
COL8A1-202ENST00000273342 PRAMEF18Q5VWM3 479 aa13.39□□□□□ -0.27
COL8A1-202ENST00000273342 KLHL4Q9C0H6 718 aa13.39□□□□□ -0.27
COL8A1-202ENST00000273342 STK32BQ9NY57 414 aa13.39□□□□□ -0.27
COL8A1-202ENST00000273342 RIPK3Q9Y572 518 aa13.39□□□□□ -0.27
COL8A1-202ENST00000273342 TCRBV5S1A1TA0A578 114 aa13.39□□□□□ -0.27
COL8A1-202ENST00000273342 KRT76Q01546 638 aa13.39□□□□□ -0.27
COL8A1-202ENST00000273342 TTLL12Q14166 644 aaPredicted RBP13.39□□□□□ -0.27
COL8A1-202ENST00000273342 FAM160B2Q86V87 743 aa13.39□□□□□ -0.27
COL8A1-202ENST00000273342 PGBD4Q96DM1 585 aa13.39□□□□□ -0.27
COL8A1-202ENST00000273342 ZNF778Q96MU6 729 aa13.39□□□□□ -0.27
COL8A1-202ENST00000273342 ZNF277Q9NRM2 450 aaPredicted RBP13.39□□□□□ -0.27
COL8A1-202ENST00000273342 WNK3Q9BYP7 1800 aa13.39□□□□□ -0.27
COL8A1-202ENST00000273342 DCXO43602 365 aa13.38□□□□□ -0.27
COL8A1-202ENST00000273342 TRPA1O75762 1119 aa13.38□□□□□ -0.27
COL8A1-202ENST00000273342 KRT7P08729 469 aa13.38□□□□□ -0.27
COL8A1-202ENST00000273342 UQCRBP14927 111 aa13.38□□□□□ -0.27
COL8A1-202ENST00000273342 TBXAS1P24557 533 aaPredicted RBP13.38□□□□□ -0.27
COL8A1-202ENST00000273342 TRPC3Q13507 836 aa13.38□□□□□ -0.27
COL8A1-202ENST00000273342 EML3Q32P44 896 aa13.38□□□□□ -0.27
COL8A1-202ENST00000273342 ATG14Q6ZNE5 492 aa13.38□□□□□ -0.27
COL8A1-202ENST00000273342 RBM44Q6ZP01 1051 aaKnown RBP13.38□□□□□ -0.27
COL8A1-202ENST00000273342 PHTF2Q8N3S3 785 aa13.38□□□□□ -0.27
COL8A1-202ENST00000273342 STKLD1Q8NE28 680 aa13.38□□□□□ -0.27
COL8A1-202ENST00000273342 UBA3Q8TBC4 463 aa13.38□□□□□ -0.27
COL8A1-202ENST00000273342 ABTB1Q969K4 478 aaPredicted RBP13.38□□□□□ -0.27
COL8A1-202ENST00000273342 C7orf26Q96N11 449 aa13.38□□□□□ -0.27
COL8A1-202ENST00000273342 GRIP2Q9C0E4 1043 aa13.38□□□□□ -0.27
COL8A1-202ENST00000273342 ARHGAP28Q9P2N2 729 aa13.38□□□□□ -0.27
COL8A1-202ENST00000273342 MAGED2Q9UNF1 606 aaPredicted RBP13.38□□□□□ -0.27
COL8A1-202ENST00000273342 APOBEC2Q9Y235 224 aaKnown RBP13.38□□□□□ -0.27
COL8A1-202ENST00000273342 RBBP6Q7Z6E9 1792 aaKnown RBP13.38□□□□□ -0.27
COL8A1-202ENST00000273342 ENTPD3O75355 529 aa13.38□□□□□ -0.27
COL8A1-202ENST00000273342 DGAT1O75907 488 aa13.38□□□□□ -0.27
COL8A1-202ENST00000273342 ADORA2AP29274 412 aa13.38□□□□□ -0.27
COL8A1-202ENST00000273342 COPAP53621 1224 aa13.38□□□□□ -0.27
COL8A1-202ENST00000273342 FOLH1Q04609 750 aa13.38□□□□□ -0.27
COL8A1-202ENST00000273342 EMC2Q15006 297 aa13.38□□□□□ -0.27
COL8A1-202ENST00000273342 TEX44Q53QW1 395 aa13.38□□□□□ -0.27
COL8A1-202ENST00000273342 ACAD11Q709F0 780 aa13.38□□□□□ -0.27
COL8A1-202ENST00000273342 THNSL1Q8IYQ7 743 aa13.38□□□□□ -0.27
COL8A1-202ENST00000273342 HACE1Q8IYU2 909 aa13.38□□□□□ -0.27
COL8A1-202ENST00000273342 ADGRF2Q8IZF7 708 aa13.38□□□□□ -0.27
COL8A1-202ENST00000273342 ARHGAP18Q8N392 663 aa13.38□□□□□ -0.27
COL8A1-202ENST00000273342 TTC13Q8NBP0 860 aa13.38□□□□□ -0.27
COL8A1-202ENST00000273342 CNBD2Q96M20 576 aa13.38□□□□□ -0.27
COL8A1-202ENST00000273342 PEBP4Q96S96 227 aa13.38□□□□□ -0.27
COL8A1-202ENST00000273342 USP18Q9UMW8 372 aa13.38□□□□□ -0.27
COL8A1-202ENST00000273342 INPP5FQ9Y2H2 1132 aa13.38□□□□□ -0.27
COL8A1-202ENST00000273342 CNTNAP2Q9UHC6 1331 aa13.38□□□□□ -0.27
COL8A1-202ENST00000273342 E9PBE3 544 aa13.37□□□□□ -0.27
COL8A1-202ENST00000273342 APOC4-APOC2K7ER74 178 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms