RNA–Protein interactions for RNA: ENST00000267163.4

RB1-201, Transcript of RB transcriptional corepressor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RB1, Length 4,840 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RB1-201ENST00000267163 USP10Q14694 798 aaKnown RBP13.78□□□□□ -0.2
RB1-201ENST00000267163 ECM1Q16610 540 aa13.78□□□□□ -0.2
RB1-201ENST00000267163 TRIM60Q495X7 471 aa13.78□□□□□ -0.2
RB1-201ENST00000267163 ATG16L1Q676U5 607 aa13.78□□□□□ -0.2
RB1-201ENST00000267163 OOSP2Q86WS3 158 aa13.78□□□□□ -0.2
RB1-201ENST00000267163 PDZD8Q8NEN9 1154 aa13.78□□□□□ -0.2
RB1-201ENST00000267163 MAML1Q92585 1016 aa13.78□□□□□ -0.2
RB1-201ENST00000267163 PACSIN1Q9BY11 444 aa13.78□□□□□ -0.2
RB1-201ENST00000267163 POPDC2Q9HBU9 364 aa13.78□□□□□ -0.2
RB1-201ENST00000267163 ABCC13Q9NSE7 274 aa13.78□□□□□ -0.2
RB1-201ENST00000267163 RAB23Q9ULC3 237 aa13.78□□□□□ -0.2
RB1-201ENST00000267163 INTUQ9ULD6 942 aa13.78□□□□□ -0.2
RB1-201ENST00000267163 PLIN4Q96Q06 1357 aa13.77□□□□□ -0.2
RB1-201ENST00000267163 RANBP1P43487 201 aa13.77□□□□□ -0.2
RB1-201ENST00000267163 LDLRAD1Q5T700 205 aa13.77□□□□□ -0.2
RB1-201ENST00000267163 KIAA1324Q6UXG2 1013 aaKnown RBP13.77□□□□□ -0.2
RB1-201ENST00000267163 DSG4Q86SJ6 1040 aa13.77□□□□□ -0.2
RB1-201ENST00000267163 NUF2Q9BZD4 464 aa13.77□□□□□ -0.2
RB1-201ENST00000267163 SMARCAL1Q9NZC9 954 aa13.77□□□□□ -0.2
RB1-201ENST00000267163 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.77□□□□□ -0.2
RB1-201ENST00000267163 MAFBQ9Y5Q3 323 aaPredicted RBP13.77□□□□□ -0.2
RB1-201ENST00000267163 SMIM24O75264 130 aa13.77□□□□□ -0.21
RB1-201ENST00000267163 IRX1P78414 480 aaPredicted RBP13.77□□□□□ -0.21
RB1-201ENST00000267163 C1QBPQ07021 282 aaKnown RBP13.77□□□□□ -0.21
RB1-201ENST00000267163 NNTQ13423 1086 aa13.77□□□□□ -0.21
RB1-201ENST00000267163 CCDC85BQ15834 202 aaPredicted RBP13.77□□□□□ -0.21
RB1-201ENST00000267163 IL17AQ16552 155 aa13.77□□□□□ -0.21
RB1-201ENST00000267163 BCAS4Q8TDM0 211 aa13.77□□□□□ -0.21
RB1-201ENST00000267163 EIF2AQ9BY44 585 aaKnown RBP13.77□□□□□ -0.21
RB1-201ENST00000267163 NIFKQ9BYG3 293 aaKnown RBP13.77□□□□□ -0.21
RB1-201ENST00000267163 ZCCHC17Q9NP64 241 aaKnown RBP13.77□□□□□ -0.21
RB1-201ENST00000267163 FBXO10Q9UK96 956 aa13.77□□□□□ -0.21
RB1-201ENST00000267163 PHF2O75151 1096 aa13.77□□□□□ -0.21
RB1-201ENST00000267163 PYGLP06737 847 aa13.77□□□□□ -0.21
RB1-201ENST00000267163 ARHGAP1Q07960 439 aa13.77□□□□□ -0.21
RB1-201ENST00000267163 CALML6Q8TD86 181 aa13.77□□□□□ -0.21
RB1-201ENST00000267163 TKTL2Q9H0I9 626 aa13.77□□□□□ -0.21
RB1-201ENST00000267163 DHX33Q9H6R0 707 aaKnown RBP13.77□□□□□ -0.21
RB1-201ENST00000267163 UBP1Q9NZI7 540 aa13.77□□□□□ -0.21
RB1-201ENST00000267163 MORF4L1Q9UBU8 362 aa13.77□□□□□ -0.21
RB1-201ENST00000267163 TUBGCP4Q9UGJ1 667 aa13.77□□□□□ -0.21
RB1-201ENST00000267163 RARGP13631 454 aa13.76□□□□□ -0.21
RB1-201ENST00000267163 SLC6A3Q01959 620 aa13.76□□□□□ -0.21
RB1-201ENST00000267163 ZC3H12AQ5D1E8 599 aaKnown RBP13.76□□□□□ -0.21
RB1-201ENST00000267163 SERPINA13PQ6UXR4 307 aa13.76□□□□□ -0.21
RB1-201ENST00000267163 NUP93Q8N1F7 819 aa13.76□□□□□ -0.21
RB1-201ENST00000267163 CYTH2Q99418 400 aa13.76□□□□□ -0.21
RB1-201ENST00000267163 C11orf84Q9BUA3 381 aaPredicted RBP13.76□□□□□ -0.21
RB1-201ENST00000267163 DNMT3LQ9UJW3 386 aa13.76□□□□□ -0.21
RB1-201ENST00000267163 ADAM28Q9UKQ2 775 aa13.76□□□□□ -0.21
RB1-201ENST00000267163 STK38LQ9Y2H1 464 aa13.76□□□□□ -0.21
RB1-201ENST00000267163 RWDD3Q9Y3V2 267 aa13.76□□□□□ -0.21
RB1-201ENST00000267163 CLDN5O00501 218 aa13.76□□□□□ -0.21
RB1-201ENST00000267163 SUN1O94901 812 aa13.76□□□□□ -0.21
RB1-201ENST00000267163 CHKAP35790 457 aa13.76□□□□□ -0.21
RB1-201ENST00000267163 FUT10Q6P4F1 479 aa13.76□□□□□ -0.21
RB1-201ENST00000267163 FBXO46Q6PJ61 603 aaPredicted RBP13.76□□□□□ -0.21
RB1-201ENST00000267163 ZDHHC17Q8IUH5 632 aa13.76□□□□□ -0.21
RB1-201ENST00000267163 MAB21L3Q8N8X9 362 aa13.76□□□□□ -0.21
RB1-201ENST00000267163 ARMC2Q8NEN0 867 aa13.76□□□□□ -0.21
RB1-201ENST00000267163 TPCN2Q8NHX9 752 aa13.76□□□□□ -0.21
RB1-201ENST00000267163 ELMO2Q96JJ3 720 aa13.76□□□□□ -0.21
RB1-201ENST00000267163 TRAIPQ9BWF2 469 aa13.76□□□□□ -0.21
RB1-201ENST00000267163 MLXIPLQ9NP71 852 aa13.76□□□□□ -0.21
RB1-201ENST00000267163 OSGEPQ9NPF4 335 aa13.76□□□□□ -0.21
RB1-201ENST00000267163 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.76□□□□□ -0.21
RB1-201ENST00000267163 NEU2Q9Y3R4 380 aa13.76□□□□□ -0.21
RB1-201ENST00000267163 TMEM247A6NEH6 219 aa13.76□□□□□ -0.21
RB1-201ENST00000267163 PROSCO94903 275 aa13.76□□□□□ -0.21
RB1-201ENST00000267163 ARIH2O95376 493 aa13.76□□□□□ -0.21
RB1-201ENST00000267163 TRUB2O95900 331 aaKnown RBP13.76□□□□□ -0.21
RB1-201ENST00000267163 CALCAP01258 141 aa13.76□□□□□ -0.21
RB1-201ENST00000267163 PAX3P23760 479 aa13.76□□□□□ -0.21
RB1-201ENST00000267163 STIP1P31948 543 aaKnown RBP13.76□□□□□ -0.21
RB1-201ENST00000267163 PTK2BQ14289 1009 aa13.76□□□□□ -0.21
RB1-201ENST00000267163 LRRC52Q8N7C0 313 aa13.76□□□□□ -0.21
RB1-201ENST00000267163 SPPL2BQ8TCT7 592 aa13.76□□□□□ -0.21
RB1-201ENST00000267163 RAB3IPQ96QF0 476 aaPredicted RBP13.76□□□□□ -0.21
RB1-201ENST00000267163 TCF25Q9BQ70 676 aa13.76□□□□□ -0.21
RB1-201ENST00000267163 NFKBIZQ9BYH8 718 aa13.76□□□□□ -0.21
RB1-201ENST00000267163 CASS4Q9NQ75 786 aa13.76□□□□□ -0.21
RB1-201ENST00000267163 IGLV3-22A0A075B6J6 115 aa13.76□□□□□ -0.21
RB1-201ENST00000267163 KIF3CO14782 793 aa13.76□□□□□ -0.21
RB1-201ENST00000267163 POLBP06746 335 aa13.76□□□□□ -0.21
RB1-201ENST00000267163 LINC00523Q86TU6 105 aa13.76□□□□□ -0.21
RB1-201ENST00000267163 CRLF3Q8IUI8 442 aa13.76□□□□□ -0.21
RB1-201ENST00000267163 MCOLN2Q8IZK6 566 aa13.76□□□□□ -0.21
RB1-201ENST00000267163 ACP6Q9NPH0 428 aa13.76□□□□□ -0.21
RB1-201ENST00000267163 GTF2IRD1Q9UHL9 959 aa13.76□□□□□ -0.21
RB1-201ENST00000267163 SHPRHQ149N8 1683 aa13.75□□□□□ -0.21
RB1-201ENST00000267163 SERPINF2P08697 491 aa13.75□□□□□ -0.21
RB1-201ENST00000267163 SLC8A1P32418 973 aa13.75□□□□□ -0.21
RB1-201ENST00000267163 GGCXP38435 758 aa13.75□□□□□ -0.21
RB1-201ENST00000267163 WDR75Q8IWA0 830 aaKnown RBP13.75□□□□□ -0.21
RB1-201ENST00000267163 BSNDQ8WZ55 320 aa13.75□□□□□ -0.21
RB1-201ENST00000267163 SKA1Q96BD8 255 aa13.75□□□□□ -0.21
RB1-201ENST00000267163 A0A0B4J269 797 aa13.75□□□□□ -0.21
RB1-201ENST00000267163 CCL16O15467 120 aa13.75□□□□□ -0.21
RB1-201ENST00000267163 TLR5O60602 858 aa13.75□□□□□ -0.21
RB1-201ENST00000267163 TSPAN1O60635 241 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms