RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 YWHAGP61981 247 aaKnown RBP eCLIP13.43□□□□□ -0.26
CPSF6-201ENST00000266679 KCNJ2P63252 427 aa13.43□□□□□ -0.26
CPSF6-201ENST00000266679 SLC6A3Q01959 620 aa13.43□□□□□ -0.26
CPSF6-201ENST00000266679 RNF43Q68DV7 783 aa13.43□□□□□ -0.26
CPSF6-201ENST00000266679 ADGRD1Q6QNK2 874 aa13.43□□□□□ -0.26
CPSF6-201ENST00000266679 SCUBE3Q8IX30 993 aa13.43□□□□□ -0.26
CPSF6-201ENST00000266679 PQLC3Q8N755 202 aa13.43□□□□□ -0.26
CPSF6-201ENST00000266679 PLD5Q8N7P1 536 aa13.43□□□□□ -0.26
CPSF6-201ENST00000266679 OR6B3Q8NGW1 331 aa13.43□□□□□ -0.26
CPSF6-201ENST00000266679 CFAP36Q96G28 342 aa13.43□□□□□ -0.26
CPSF6-201ENST00000266679 DHRS4Q9BTZ2 278 aa13.43□□□□□ -0.26
CPSF6-201ENST00000266679 B3GNT5Q9BYG0 378 aa13.43□□□□□ -0.26
CPSF6-201ENST00000266679 CDHR5Q9HBB8 845 aa13.43□□□□□ -0.26
CPSF6-201ENST00000266679 RAB6BQ9NRW1 208 aa13.43□□□□□ -0.26
CPSF6-201ENST00000266679 HESX1Q9UBX0 185 aa13.43□□□□□ -0.26
CPSF6-201ENST00000266679 SRRDQ9UH36 339 aa13.43□□□□□ -0.26
CPSF6-201ENST00000266679 CFAP73A6NFT4 308 aa13.42□□□□□ -0.26
CPSF6-201ENST00000266679 SMAPO00193 183 aa13.42□□□□□ -0.26
CPSF6-201ENST00000266679 PAPSS1O43252 624 aaPredicted RBP13.42□□□□□ -0.26
CPSF6-201ENST00000266679 NQO1P15559 274 aaKnown RBP13.42□□□□□ -0.26
CPSF6-201ENST00000266679 TFE3P19532 575 aaPredicted RBP13.42□□□□□ -0.26
CPSF6-201ENST00000266679 SLC18A1P54219 525 aa13.42□□□□□ -0.26
CPSF6-201ENST00000266679 BNIP1Q12981 228 aa13.42□□□□□ -0.26
CPSF6-201ENST00000266679 ARHGEF6Q15052 776 aa13.42□□□□□ -0.26
CPSF6-201ENST00000266679 PKDCCQ504Y2 493 aa13.42□□□□□ -0.26
CPSF6-201ENST00000266679 SESTD1Q86VW0 696 aa13.42□□□□□ -0.26
CPSF6-201ENST00000266679 MAP7D3Q8IWC1 876 aa13.42□□□□□ -0.26
CPSF6-201ENST00000266679 KIF2BQ8N4N8 673 aa13.42□□□□□ -0.26
CPSF6-201ENST00000266679 GBP7Q8N8V2 638 aaPredicted RBP13.42□□□□□ -0.26
CPSF6-201ENST00000266679 BEST2Q8NFU1 509 aa13.42□□□□□ -0.26
CPSF6-201ENST00000266679 CLEC4CQ8WTT0 213 aa13.42□□□□□ -0.26
CPSF6-201ENST00000266679 MZB1Q8WU39 189 aa13.42□□□□□ -0.26
CPSF6-201ENST00000266679 OSMRQ99650 979 aa13.42□□□□□ -0.26
CPSF6-201ENST00000266679 ADAMTS10Q9H324 1103 aa13.42□□□□□ -0.26
CPSF6-201ENST00000266679 C12orf65Q9H3J6 166 aaKnown RBP13.42□□□□□ -0.26
CPSF6-201ENST00000266679 FETUBQ9UGM5 382 aa13.42□□□□□ -0.26
CPSF6-201ENST00000266679 STARD13Q9Y3M8 1113 aa13.42□□□□□ -0.26
CPSF6-201ENST00000266679 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.41□□□□□ -0.26
CPSF6-201ENST00000266679 WDR91A4D1P6 747 aa13.41□□□□□ -0.26
CPSF6-201ENST00000266679 CHUKO15111 745 aa13.41□□□□□ -0.26
CPSF6-201ENST00000266679 ADCY6O43306 1168 aa13.41□□□□□ -0.26
CPSF6-201ENST00000266679 AVILO75366 819 aa13.41□□□□□ -0.26
CPSF6-201ENST00000266679 GABBR2O75899 941 aa13.41□□□□□ -0.26
CPSF6-201ENST00000266679 ZWINTO95229 277 aa13.41□□□□□ -0.26
CPSF6-201ENST00000266679 ZBED1O96006 694 aa13.41□□□□□ -0.26
CPSF6-201ENST00000266679 ATP2A2P16615 1042 aaKnown RBP13.41□□□□□ -0.26
CPSF6-201ENST00000266679 IL4RP24394 825 aa13.41□□□□□ -0.26
CPSF6-201ENST00000266679 RBL1P28749 1068 aa13.41□□□□□ -0.26
CPSF6-201ENST00000266679 ADORA2BP29275 332 aa13.41□□□□□ -0.26
CPSF6-201ENST00000266679 HOXA11P31270 313 aaPredicted RBP13.41□□□□□ -0.26
CPSF6-201ENST00000266679 STIP1P31948 543 aaKnown RBP13.41□□□□□ -0.26
CPSF6-201ENST00000266679 BCAR1P56945 870 aa13.41□□□□□ -0.26
CPSF6-201ENST00000266679 ACVR2BQ13705 512 aa13.41□□□□□ -0.26
CPSF6-201ENST00000266679 PDK2Q15119 407 aa13.41□□□□□ -0.26
CPSF6-201ENST00000266679 SEPT7Q16181 437 aaKnown RBP13.41□□□□□ -0.26
CPSF6-201ENST00000266679 DGKDQ16760 1214 aa13.41□□□□□ -0.26
CPSF6-201ENST00000266679 DUSP28Q4G0W2 176 aa13.41□□□□□ -0.26
CPSF6-201ENST00000266679 PPP6R3Q5H9R7 873 aaPredicted RBP13.41□□□□□ -0.26
CPSF6-201ENST00000266679 SLC27A1Q6PCB7 646 aa13.41□□□□□ -0.26
CPSF6-201ENST00000266679 ZNF467Q7Z7K2 595 aaPredicted RBP13.41□□□□□ -0.26
CPSF6-201ENST00000266679 FAM228AQ86W67 206 aa13.41□□□□□ -0.26
CPSF6-201ENST00000266679 C7orf31Q8N865 590 aa13.41□□□□□ -0.26
CPSF6-201ENST00000266679 ANKLE1Q8NAG6 615 aa13.41□□□□□ -0.26
CPSF6-201ENST00000266679 PCDH19Q8TAB3 1148 aa13.41□□□□□ -0.26
CPSF6-201ENST00000266679 SLC4A5Q9BY07 1137 aa13.41□□□□□ -0.26
CPSF6-201ENST00000266679 GCOM2Q9BZD3 368 aaPredicted RBP13.41□□□□□ -0.26
CPSF6-201ENST00000266679 NXF3Q9H4D5 531 aaKnown RBP13.41□□□□□ -0.26
CPSF6-201ENST00000266679 PAK5Q9P286 719 aa13.41□□□□□ -0.26
CPSF6-201ENST00000266679 TRIM33Q9UPN9 1127 aa13.41□□□□□ -0.26
CPSF6-201ENST00000266679 A8MXQ7 604 aa13.41□□□□□ -0.26
CPSF6-201ENST00000266679 MGRN1O60291 552 aa13.41□□□□□ -0.26
CPSF6-201ENST00000266679 EDF1O60869 148 aaKnown RBP13.41□□□□□ -0.26
CPSF6-201ENST00000266679 ATP6V1G2O95670 118 aa13.41□□□□□ -0.26
CPSF6-201ENST00000266679 SETSIPP0DME0 302 aa13.41□□□□□ -0.26
CPSF6-201ENST00000266679 FGFR1P11362 822 aa13.41□□□□□ -0.26
CPSF6-201ENST00000266679 CCDC130P13994 396 aa13.41□□□□□ -0.26
CPSF6-201ENST00000266679 TSHRP16473 764 aa13.41□□□□□ -0.26
CPSF6-201ENST00000266679 TGM2P21980 687 aa13.41□□□□□ -0.26
CPSF6-201ENST00000266679 ADRA1DP25100 572 aa13.41□□□□□ -0.26
CPSF6-201ENST00000266679 BOLA3Q53S33 107 aa13.41□□□□□ -0.26
CPSF6-201ENST00000266679 RGS9BPQ6ZS82 235 aa13.41□□□□□ -0.26
CPSF6-201ENST00000266679 GPR142Q7Z601 462 aa13.41□□□□□ -0.26
CPSF6-201ENST00000266679 RAET1EQ8TD07 263 aa13.41□□□□□ -0.26
CPSF6-201ENST00000266679 TEKT4Q8WW24 435 aa13.41□□□□□ -0.26
CPSF6-201ENST00000266679 KHSRPQ92945 711 aaKnown RBP eCLIP13.41□□□□□ -0.264e-7■■■□□ 16.2
CPSF6-201ENST00000266679 MAML3Q96JK9 1138 aa13.41□□□□□ -0.26
CPSF6-201ENST00000266679 FAM124BQ9H5Z6 455 aaPredicted RBP13.41□□□□□ -0.26
CPSF6-201ENST00000266679 PLEKHA5Q9HAU0 1116 aa13.41□□□□□ -0.26
CPSF6-201ENST00000266679 USP29Q9HBJ7 922 aa13.41□□□□□ -0.26
CPSF6-201ENST00000266679 SSU72Q9NP77 194 aaKnown RBP13.41□□□□□ -0.26
CPSF6-201ENST00000266679 BAIAP2L1Q9UHR4 511 aa13.41□□□□□ -0.26
CPSF6-201ENST00000266679 GJD2Q9UKL4 321 aa13.41□□□□□ -0.26
CPSF6-201ENST00000266679 DERAQ9Y315 318 aa13.41□□□□□ -0.26
CPSF6-201ENST00000266679 TCRBV9S1A1TA0A576 114 aa13.4□□□□□ -0.26
CPSF6-201ENST00000266679 CHADO15335 359 aa13.4□□□□□ -0.26
CPSF6-201ENST00000266679 RECQL4O94761 1208 aa13.4□□□□□ -0.26
CPSF6-201ENST00000266679 PDGFRBP09619 1106 aa13.4□□□□□ -0.26
CPSF6-201ENST00000266679 LCP1P13796 627 aa13.4□□□□□ -0.26
CPSF6-201ENST00000266679 DESP17661 470 aa13.4□□□□□ -0.26
CPSF6-201ENST00000266679 AKAP5P24588 427 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 120.6 ms