RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 CYP26A1O43174 497 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 TNFRSF21O75509 655 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 IL18RAPO95256 599 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 OXSR1O95747 527 aaPredicted RBP5.88□□□□□ -1.47
VCAN-201ENST00000265077 ENO3P13929 434 aaPredicted RBP5.88□□□□□ -1.47
VCAN-201ENST00000265077 GJA9P57773 515 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 CSTF3Q12996 717 aaKnown RBP5.88□□□□□ -1.47
VCAN-201ENST00000265077 TYSND1Q2T9J0 566 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 FARSBQ9NSD9 589 aaKnown RBP5.88□□□□□ -1.47
VCAN-201ENST00000265077 NPHP4O75161 1426 aaPredicted RBP5.88□□□□□ -1.47
VCAN-201ENST00000265077 A0A0A6YYK5 440 aaPredicted RBP5.88□□□□□ -1.47
VCAN-201ENST00000265077 A0A0G2JPF8 293 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 HNRNPCL3B7ZW38 293 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 SLC16A4O15374 487 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 HNRNPCL4P0DMR1 293 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 HLA-DPA1P20036 260 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 ENDOUP21128 410 aaKnown RBP5.88□□□□□ -1.47
VCAN-201ENST00000265077 ERVK-24P63145 666 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 SBK1Q52WX2 424 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 HAUS6Q7Z4H7 955 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 STK32CQ86UX6 486 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 SH3KBP1Q96B97 665 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 RBBP8Q99708 897 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 POLR3FQ9H1D9 316 aaPredicted RBP5.88□□□□□ -1.47
VCAN-201ENST00000265077 DDX3XO00571 662 aaKnown RBP eCLIP5.88□□□□□ -1.47
VCAN-201ENST00000265077 UQCRBP14927 111 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 ANO7Q6IWH7 933 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 MYO1HQ8N1T3 1032 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 FNIP1Q8TF40 1166 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 ISCA1Q9BUE6 129 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 ZSCAN5BA6NJL1 495 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 MED26O95402 600 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 ALBP02768 609 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 CYP2D6P10635 497 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 SLC45A4Q5BKX6 768 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 KLHDC7AQ5VTJ3 777 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 SCARA3Q6AZY7 606 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 NIPAL1Q6NVV3 410 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 LINC00523Q86TU6 105 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 ERVK-11Q9UQG0 969 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 HMGB3O15347 200 aaKnown RBP5.88□□□□□ -1.47
VCAN-201ENST00000265077 GLI1P08151 1106 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 RARGP13631 454 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 UBXN2AP68543 259 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 MTFR1Q15390 333 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 DEPDC1Q5TB30 811 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 PGM2Q96G03 612 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 ZNF560Q96MR9 790 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 BBS2Q9BXC9 721 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 TMEM117Q9H0C3 514 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 PNPLA3Q9NST1 481 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 DNAJC5BQ9UF47 199 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 SLC24A2Q9UI40 661 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 SOX13Q9UN79 622 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 ALG6Q9Y672 507 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 IGSF9BQ9UPX0 1349 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 USP17L15C9J2P7 530 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 USP17L13C9JLJ4 530 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 USP17L11C9JVI0 530 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 USP17L18D6R9N7 530 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 USP17L22D6RA61 530 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 USP17L17D6RBQ6 530 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 USP17L19D6RCP7 530 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 USP17L20D6RJB6 530 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 SLCO1B7G3V0H7 640 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 BOLA2-SMG1P6H3BVE0 249 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 CCNKO75909 580 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 POLBP06746 335 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 CDC42EP1Q00587 391 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 USP17L24Q0WX57 530 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 SLC15A2Q16348 729 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 USP17L6PQ6QN14 398 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 PID1Q7Z2X4 250 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 CYP2U1Q7Z449 544 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 SATL1Q86VE3 508 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 EXOC3L1Q86VI1 746 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 CDC26Q8NHZ8 85 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 SCFD2Q8WU76 684 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 HSPBAP1Q96EW2 488 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 CEP295NLQ96MC4 621 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 IRF2BPLQ9H1B7 796 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 GOLPH3Q9H4A6 298 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 ALG13Q9NP73 1137 aaKnown RBP5.87□□□□□ -1.47
VCAN-201ENST00000265077 KIDINS220Q9ULH0 1771 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 CYP2C9P11712 490 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 CNTFP26441 200 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 EPHA7Q15375 998 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 CCDC85BQ15834 202 aaPredicted RBP5.87□□□□□ -1.47
VCAN-201ENST00000265077 TCHHL1Q5QJ38 904 aaPredicted RBP5.87□□□□□ -1.47
VCAN-201ENST00000265077 RBM20Q5T481 1227 aaKnown RBP5.87□□□□□ -1.47
VCAN-201ENST00000265077 ELMOD2Q8IZ81 293 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 PHF21AQ96BD5 680 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 FAR2Q96K12 515 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 BAIAP2Q9UQB8 552 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 BCAP31P51572 246 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 NSUN2Q08J23 767 aaKnown RBP eCLIP5.87□□□□□ -1.47
VCAN-201ENST00000265077 TAB1Q15750 504 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 ANO4Q32M45 955 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 ANKDD1AQ495B1 522 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 SPANXN2Q5MJ10 180 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms