RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 TXNRD3NBQ6F5E7 133 aa16.91■□□□□ 0.3
CTCF-201ENST00000264010 HERPUD2Q9BSE4 406 aa16.91■□□□□ 0.3
CTCF-201ENST00000264010 PTPRHQ9HD43 1115 aa16.91■□□□□ 0.3
CTCF-201ENST00000264010 DERAQ9Y315 318 aa16.91■□□□□ 0.3
CTCF-201ENST00000264010 TNS1Q9HBL0 1735 aaKnown RBP16.91■□□□□ 0.3
CTCF-201ENST00000264010 RECQL4O94761 1208 aa16.91■□□□□ 0.3
CTCF-201ENST00000264010 CELF2O95319 508 aaKnown RBP16.91■□□□□ 0.3
CTCF-201ENST00000264010 SSTR1P30872 391 aa16.91■□□□□ 0.3
CTCF-201ENST00000264010 SULT1E1P49888 294 aa16.91■□□□□ 0.3
CTCF-201ENST00000264010 PKN2Q16513 984 aaKnown RBP16.91■□□□□ 0.3
CTCF-201ENST00000264010 RHBDF2Q6PJF5 856 aa16.91■□□□□ 0.3
CTCF-201ENST00000264010 ILDR2Q71H61 639 aa16.91■□□□□ 0.3
CTCF-201ENST00000264010 METTL23Q86XA0 190 aa16.91■□□□□ 0.3
CTCF-201ENST00000264010 NUDCD1Q96RS6 583 aa16.91■□□□□ 0.3
CTCF-201ENST00000264010 PAFAH2Q99487 392 aa16.91■□□□□ 0.3
CTCF-201ENST00000264010 NRCAMQ92823 1304 aa16.91■□□□□ 0.3
CTCF-201ENST00000264010 GSTA1P08263 222 aa16.9■□□□□ 0.3
CTCF-201ENST00000264010 CYP2B6P20813 491 aa16.9■□□□□ 0.3
CTCF-201ENST00000264010 KLRC2P26717 231 aa16.9■□□□□ 0.3
CTCF-201ENST00000264010 MCCD1P59942 119 aaPredicted RBP16.9■□□□□ 0.3
CTCF-201ENST00000264010 PTK7Q13308 1070 aa16.9■□□□□ 0.3
CTCF-201ENST00000264010 EFHC2Q5JST6 749 aa16.9■□□□□ 0.3
CTCF-201ENST00000264010 LVRNQ6Q4G3 990 aa16.9■□□□□ 0.3
CTCF-201ENST00000264010 C12orf29Q8N999 325 aa16.9■□□□□ 0.3
CTCF-201ENST00000264010 DEPDC1BQ8WUY9 529 aa16.9■□□□□ 0.3
CTCF-201ENST00000264010 TCEA3O75764 348 aa16.9■□□□□ 0.3
CTCF-201ENST00000264010 ZNF189O75820 626 aaPredicted RBP16.9■□□□□ 0.3
CTCF-201ENST00000264010 ATP5HO75947 161 aa16.9■□□□□ 0.3
CTCF-201ENST00000264010 MMP3P08254 477 aa16.9■□□□□ 0.3
CTCF-201ENST00000264010 AKAP5P24588 427 aa16.9■□□□□ 0.3
CTCF-201ENST00000264010 DNAJC3Q13217 504 aa16.9■□□□□ 0.3
CTCF-201ENST00000264010 LRRC52Q8N7C0 313 aa16.9■□□□□ 0.3
CTCF-201ENST00000264010 DNAJB3Q8WWF6 145 aa16.9■□□□□ 0.3
CTCF-201ENST00000264010 LRRC37BQ96QE4 947 aa16.9■□□□□ 0.3
CTCF-201ENST00000264010 TWNKQ96RR1 684 aa16.9■□□□□ 0.3
CTCF-201ENST00000264010 LGALS13Q9UHV8 139 aa16.9■□□□□ 0.3
CTCF-201ENST00000264010 C5orf60A6NFR6 353 aa16.9■□□□□ 0.3
CTCF-201ENST00000264010 RARBP10826 455 aa16.9■□□□□ 0.3
CTCF-201ENST00000264010 DOCK1Q14185 1865 aa16.9■□□□□ 0.3
CTCF-201ENST00000264010 PCBP1Q15365 356 aaKnown RBP eCLIP16.9■□□□□ 0.3
CTCF-201ENST00000264010 MCRS1Q96EZ8 462 aa16.9■□□□□ 0.3
CTCF-201ENST00000264010 TRIM55Q9BYV6 548 aa16.9■□□□□ 0.3
CTCF-201ENST00000264010 SNX3O60493 162 aa16.9■□□□□ 0.3
CTCF-201ENST00000264010 MAP3K6O95382 1288 aa16.9■□□□□ 0.3
CTCF-201ENST00000264010 MFSD10Q14728 455 aa16.9■□□□□ 0.3
CTCF-201ENST00000264010 ARL13BQ3SXY8 428 aa16.9■□□□□ 0.3
CTCF-201ENST00000264010 RNASEH2BQ5TBB1 312 aaKnown RBP16.9■□□□□ 0.3
CTCF-201ENST00000264010 RNF157Q96PX1 679 aa16.9■□□□□ 0.3
CTCF-201ENST00000264010 TJP2Q9UDY2 1190 aa16.9■□□□□ 0.3
CTCF-201ENST00000264010 HMGXB4Q9UGU5 601 aa16.9■□□□□ 0.3
CTCF-201ENST00000264010 CPA4Q9UI42 421 aa16.9■□□□□ 0.3
CTCF-201ENST00000264010 C17orf102A2RUQ5 167 aa16.89■□□□□ 0.29
CTCF-201ENST00000264010 SLC15A5A6NIM6 579 aa16.89■□□□□ 0.29
CTCF-201ENST00000264010 GPD2P43304 727 aa16.89■□□□□ 0.29
CTCF-201ENST00000264010 MMRN1Q13201 1228 aa16.89■□□□□ 0.29
CTCF-201ENST00000264010 FAXCQ5TGI0 409 aa16.89■□□□□ 0.29
CTCF-201ENST00000264010 TRIM74Q86UV6 250 aa16.89■□□□□ 0.29
CTCF-201ENST00000264010 TRIM73Q86UV7 250 aa16.89■□□□□ 0.29
CTCF-201ENST00000264010 UNC45BQ8IWX7 931 aa16.89■□□□□ 0.29
CTCF-201ENST00000264010 WDTC1Q8N5D0 677 aa16.89■□□□□ 0.29
CTCF-201ENST00000264010 SLC35B2Q8TB61 432 aa16.89■□□□□ 0.29
CTCF-201ENST00000264010 CCDC110Q8TBZ0 833 aa16.89■□□□□ 0.29
CTCF-201ENST00000264010 KLF6Q99612 283 aaPredicted RBP16.89■□□□□ 0.29
CTCF-201ENST00000264010 TSPYL2Q9H2G4 693 aaPredicted RBP16.89■□□□□ 0.29
CTCF-201ENST00000264010 EPB41L4BQ9H329 900 aa16.89■□□□□ 0.29
CTCF-201ENST00000264010 HES2Q9Y543 173 aa16.89■□□□□ 0.29
CTCF-201ENST00000264010 IVDP26440 423 aa16.89■□□□□ 0.29
CTCF-201ENST00000264010 KLC1Q07866 573 aa16.89■□□□□ 0.29
CTCF-201ENST00000264010 LRRC36Q1X8D7 754 aa16.89■□□□□ 0.29
CTCF-201ENST00000264010 ZNF792Q3KQV3 632 aa16.89■□□□□ 0.29
CTCF-201ENST00000264010 PRCCQ92733 491 aaPredicted RBP16.89■□□□□ 0.29
CTCF-201ENST00000264010 SDCBP2Q9H190 292 aa16.89■□□□□ 0.29
CTCF-201ENST00000264010 LRRC4CQ9HCJ2 640 aa16.89■□□□□ 0.29
CTCF-201ENST00000264010 AAASQ9NRG9 546 aa16.89■□□□□ 0.29
CTCF-201ENST00000264010 AP4E1Q9UPM8 1137 aa16.89■□□□□ 0.29
CTCF-201ENST00000264010 GON4LQ3T8J9 2241 aa16.89■□□□□ 0.29
CTCF-201ENST00000264010 ATAD5Q96QE3 1844 aa16.89■□□□□ 0.29
CTCF-201ENST00000264010 UBTFL6P0CB48 400 aaPredicted RBP16.89■□□□□ 0.29
CTCF-201ENST00000264010 SMIM10L2AP0DMW4 78 aa16.89■□□□□ 0.29
CTCF-201ENST00000264010 SMIM10L2BP0DMW5 78 aa16.89■□□□□ 0.29
CTCF-201ENST00000264010 ELK3P41970 407 aa16.89■□□□□ 0.29
CTCF-201ENST00000264010 PDE1BQ01064 536 aa16.89■□□□□ 0.29
CTCF-201ENST00000264010 NME3Q13232 169 aa16.89■□□□□ 0.29
CTCF-201ENST00000264010 PPP1R26Q5T8A7 1209 aaPredicted RBP16.89■□□□□ 0.29
CTCF-201ENST00000264010 TLK2Q86UE8 772 aa16.89■□□□□ 0.29
CTCF-201ENST00000264010 UBR7Q8N806 425 aa16.89■□□□□ 0.29
CTCF-201ENST00000264010 XAB2Q9HCS7 855 aaKnown RBP16.89■□□□□ 0.29
CTCF-201ENST00000264010 KPNA7A9QM74 516 aa16.88■□□□□ 0.29
CTCF-201ENST00000264010 SOCS7O14512 581 aa16.88■□□□□ 0.29
CTCF-201ENST00000264010 PYGLP06737 847 aa16.88■□□□□ 0.29
CTCF-201ENST00000264010 ZCCHC18P0CG32 403 aa16.88■□□□□ 0.29
CTCF-201ENST00000264010 MX2P20592 715 aa16.88■□□□□ 0.29
CTCF-201ENST00000264010 DCAF6Q58WW2 860 aa16.88■□□□□ 0.29
CTCF-201ENST00000264010 GRAMD4Q6IC98 578 aa16.88■□□□□ 0.29
CTCF-201ENST00000264010 NPNTQ6UXI9 565 aa16.88■□□□□ 0.29
CTCF-201ENST00000264010 ZNF467Q7Z7K2 595 aaPredicted RBP16.88■□□□□ 0.29
CTCF-201ENST00000264010 ANKRD23Q86SG2 305 aa16.88■□□□□ 0.29
CTCF-201ENST00000264010 ADGRF2Q8IZF7 708 aa16.88■□□□□ 0.29
CTCF-201ENST00000264010 MRPL45Q9BRJ2 306 aaKnown RBP16.88■□□□□ 0.29
CTCF-201ENST00000264010 MCM8Q9UJA3 840 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms