RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 STRIP2Q9ULQ0 834 aa9.49□□□□□ -0.89
MSH4-201ENST00000263187 CYP3A5P20815 502 aa9.49□□□□□ -0.89
MSH4-201ENST00000263187 KCNA4P22459 653 aa9.49□□□□□ -0.89
MSH4-201ENST00000263187 NDST1P52848 882 aa9.49□□□□□ -0.89
MSH4-201ENST00000263187 YWHAZP63104 245 aaKnown RBP9.49□□□□□ -0.89
MSH4-201ENST00000263187 CDK16Q00536 496 aa9.49□□□□□ -0.89
MSH4-201ENST00000263187 XRRA1Q6P2D8 792 aa9.49□□□□□ -0.89
MSH4-201ENST00000263187 ACOT1Q86TX2 421 aa9.49□□□□□ -0.89
MSH4-201ENST00000263187 NUDCD3Q8IVD9 361 aa9.49□□□□□ -0.89
MSH4-201ENST00000263187 TRPM4Q8TD43 1214 aa9.49□□□□□ -0.89
MSH4-201ENST00000263187 CLEC4CQ8WTT0 213 aa9.49□□□□□ -0.89
MSH4-201ENST00000263187 APOPT1Q96IL0 206 aa9.49□□□□□ -0.89
MSH4-201ENST00000263187 CDT1Q9H211 546 aa9.49□□□□□ -0.89
MSH4-201ENST00000263187 SEPT10Q9P0V9 454 aa9.49□□□□□ -0.89
MSH4-201ENST00000263187 CCDC78A2IDD5 438 aa9.48□□□□□ -0.89
MSH4-201ENST00000263187 DCAF8L1A6NGE4 600 aa9.48□□□□□ -0.89
MSH4-201ENST00000263187 I3L4J1 428 aa9.48□□□□□ -0.89
MSH4-201ENST00000263187 MAFO75444 373 aaPredicted RBP9.48□□□□□ -0.89
MSH4-201ENST00000263187 ZMPSTE24O75844 475 aa9.48□□□□□ -0.89
MSH4-201ENST00000263187 METTL18O95568 372 aa9.48□□□□□ -0.89
MSH4-201ENST00000263187 STAG3L1P0CL83 205 aa9.48□□□□□ -0.89
MSH4-201ENST00000263187 ADORA2AP29274 412 aa9.48□□□□□ -0.89
MSH4-201ENST00000263187 PSEN1P49768 467 aa9.48□□□□□ -0.89
MSH4-201ENST00000263187 PGGT1BP53609 377 aa9.48□□□□□ -0.89
MSH4-201ENST00000263187 SESN2P58004 480 aaPredicted RBP9.48□□□□□ -0.89
MSH4-201ENST00000263187 GBE1Q04446 702 aa9.48□□□□□ -0.89
MSH4-201ENST00000263187 PRKD1Q15139 912 aaPredicted RBP9.48□□□□□ -0.89
MSH4-201ENST00000263187 HSF5Q4G112 596 aaPredicted RBP9.48□□□□□ -0.89
MSH4-201ENST00000263187 GLRA4Q5JXX5 417 aa9.48□□□□□ -0.89
MSH4-201ENST00000263187 TEX9Q8N6V9 391 aa9.48□□□□□ -0.89
MSH4-201ENST00000263187 MTMR14Q8NCE2 650 aa9.48□□□□□ -0.89
MSH4-201ENST00000263187 FAM172AQ8WUF8 416 aa9.48□□□□□ -0.89
MSH4-201ENST00000263187 SLC44A1Q8WWI5 657 aa9.48□□□□□ -0.89
MSH4-201ENST00000263187 SEPT1Q8WYJ6 367 aa9.48□□□□□ -0.89
MSH4-201ENST00000263187 PTCD3Q96EY7 689 aaKnown RBP9.48□□□□□ -0.89
MSH4-201ENST00000263187 TMEM176AQ96HP8 235 aa9.48□□□□□ -0.89
MSH4-201ENST00000263187 SPATA33Q96N06 139 aa9.48□□□□□ -0.89
MSH4-201ENST00000263187 ZCWPW1Q9H0M4 648 aa9.48□□□□□ -0.89
MSH4-201ENST00000263187 VPS11Q9H270 941 aa9.48□□□□□ -0.89
MSH4-201ENST00000263187 CYP4F11Q9HBI6 524 aa9.48□□□□□ -0.89
MSH4-201ENST00000263187 AS3MTQ9HBK9 375 aa9.48□□□□□ -0.89
MSH4-201ENST00000263187 TMPRSS4Q9NRS4 437 aa9.48□□□□□ -0.89
MSH4-201ENST00000263187 TSPAN16Q9UKR8 245 aa9.48□□□□□ -0.89
MSH4-201ENST00000263187 G3BP2Q9UN86 482 aaKnown RBP9.48□□□□□ -0.89
MSH4-201ENST00000263187 LOXHD1Q8IVV2 1947 aa9.48□□□□□ -0.89
MSH4-201ENST00000263187 LOC100653049A0A140TA62 436 aa9.48□□□□□ -0.89
MSH4-201ENST00000263187 SMIM24O75264 130 aa9.48□□□□□ -0.89
MSH4-201ENST00000263187 KRT34O76011 436 aa9.48□□□□□ -0.89
MSH4-201ENST00000263187 PIGRP01833 764 aa9.48□□□□□ -0.89
MSH4-201ENST00000263187 ETV4P43268 484 aa9.48□□□□□ -0.89
MSH4-201ENST00000263187 NEK3P51956 506 aa9.48□□□□□ -0.89
MSH4-201ENST00000263187 RPL10AP62906 217 aaKnown RBP9.48□□□□□ -0.89
MSH4-201ENST00000263187 MRPS5P82675 430 aaKnown RBP9.48□□□□□ -0.89
MSH4-201ENST00000263187 TARBP2Q15633 366 aaKnown RBP9.48□□□□□ -0.89
MSH4-201ENST00000263187 TSNAXIP1Q2TAA8 658 aa9.48□□□□□ -0.89
MSH4-201ENST00000263187 MPZL3Q6UWV2 235 aa9.48□□□□□ -0.89
MSH4-201ENST00000263187 RGS9BPQ6ZS82 235 aa9.48□□□□□ -0.89
MSH4-201ENST00000263187 LMNTD2Q8IXW0 634 aa9.48□□□□□ -0.89
MSH4-201ENST00000263187 PLD5Q8N7P1 536 aa9.48□□□□□ -0.89
MSH4-201ENST00000263187 TTC13Q8NBP0 860 aa9.48□□□□□ -0.89
MSH4-201ENST00000263187 RBM15BQ8NDT2 890 aaKnown RBP9.48□□□□□ -0.89
MSH4-201ENST00000263187 PHC3Q8NDX5 983 aa9.48□□□□□ -0.89
MSH4-201ENST00000263187 SPDYE1Q8NFV5 336 aaPredicted RBP9.48□□□□□ -0.89
MSH4-201ENST00000263187 NLGN2Q8NFZ4 835 aa9.48□□□□□ -0.89
MSH4-201ENST00000263187 RNPEPQ9H4A4 650 aa9.48□□□□□ -0.89
MSH4-201ENST00000263187 DHX35Q9H5Z1 703 aaKnown RBP9.48□□□□□ -0.89
MSH4-201ENST00000263187 DCLRE1BQ9H816 532 aa9.48□□□□□ -0.89
MSH4-201ENST00000263187 GGA3Q9NZ52 723 aa9.48□□□□□ -0.89
MSH4-201ENST00000263187 TEX264Q9Y6I9 313 aa9.48□□□□□ -0.89
MSH4-201ENST00000263187 A0A087WZ62 844 aa9.48□□□□□ -0.89
MSH4-201ENST00000263187 ARHGAP42A6NI28 874 aa9.48□□□□□ -0.89
MSH4-201ENST00000263187 PRR5-ARHGAP8B1AHC4 643 aa9.48□□□□□ -0.89
MSH4-201ENST00000263187 TM9SF1O15321 606 aa9.48□□□□□ -0.89
MSH4-201ENST00000263187 PDGFRBP09619 1106 aa9.48□□□□□ -0.89
MSH4-201ENST00000263187 GPD1P21695 349 aa9.48□□□□□ -0.89
MSH4-201ENST00000263187 OSBPP22059 807 aa9.48□□□□□ -0.89
MSH4-201ENST00000263187 RABGGTBP53611 331 aa9.48□□□□□ -0.89
MSH4-201ENST00000263187 EPHB1P54762 984 aa9.48□□□□□ -0.89
MSH4-201ENST00000263187 MCCD1P59942 119 aaPredicted RBP9.48□□□□□ -0.89
MSH4-201ENST00000263187 ARHGAP8P85298 464 aa9.48□□□□□ -0.89
MSH4-201ENST00000263187 PPP2R5DQ14738 602 aa9.48□□□□□ -0.89
MSH4-201ENST00000263187 VWA5B1Q5TIE3 1220 aa9.48□□□□□ -0.89
MSH4-201ENST00000263187 FAM160B1Q5W0V3 765 aa9.48□□□□□ -0.89
MSH4-201ENST00000263187 DENND5BQ6ZUT9 1274 aa9.48□□□□□ -0.89
MSH4-201ENST00000263187 CAND1Q86VP6 1230 aaKnown RBP9.48□□□□□ -0.89
MSH4-201ENST00000263187 SULF1Q8IWU6 871 aa9.48□□□□□ -0.89
MSH4-201ENST00000263187 KBTBD2Q8IY47 623 aa9.48□□□□□ -0.89
MSH4-201ENST00000263187 PYROXD2Q8N2H3 581 aa9.48□□□□□ -0.89
MSH4-201ENST00000263187 E2F7Q96AV8 911 aa9.48□□□□□ -0.89
MSH4-201ENST00000263187 HPDLQ96IR7 371 aa9.48□□□□□ -0.89
MSH4-201ENST00000263187 FDXACB1Q9BRP7 624 aaPredicted RBP9.48□□□□□ -0.89
MSH4-201ENST00000263187 DHRS4Q9BTZ2 278 aa9.48□□□□□ -0.89
MSH4-201ENST00000263187 NIFKQ9BYG3 293 aaKnown RBP9.48□□□□□ -0.89
MSH4-201ENST00000263187 TMEM134Q9H6X4 195 aa9.48□□□□□ -0.89
MSH4-201ENST00000263187 BATF3Q9NR55 127 aa9.48□□□□□ -0.89
MSH4-201ENST00000263187 ASNSD1Q9NWL6 643 aa9.48□□□□□ -0.89
MSH4-201ENST00000263187 HOXC10Q9NYD6 342 aa9.48□□□□□ -0.89
MSH4-201ENST00000263187 AKT3Q9Y243 479 aa9.48□□□□□ -0.89
MSH4-201ENST00000263187 HES2Q9Y543 173 aa9.48□□□□□ -0.89
MSH4-201ENST00000263187 LRRC42Q9Y546 428 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms