RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 TMEM114B3SHH9 223 aa8.66□□□□□ -1.02
LDB3-201ENST00000263066 DEAF1O75398 565 aaPredicted RBP8.66□□□□□ -1.02
LDB3-201ENST00000263066 GGPS1O95749 300 aa8.66□□□□□ -1.02
LDB3-201ENST00000263066 KRT19P08727 400 aa8.66□□□□□ -1.02
LDB3-201ENST00000263066 NUDT17P0C025 328 aa8.66□□□□□ -1.02
LDB3-201ENST00000263066 STMN1P16949 149 aa8.66□□□□□ -1.02
LDB3-201ENST00000263066 SLC1A1P43005 524 aa8.66□□□□□ -1.02
LDB3-201ENST00000263066 COPZ1P61923 177 aa8.66□□□□□ -1.02
LDB3-201ENST00000263066 DHX34Q14147 1143 aaKnown RBP8.66□□□□□ -1.02
LDB3-201ENST00000263066 E2F2Q14209 437 aa8.66□□□□□ -1.02
LDB3-201ENST00000263066 PTK2BQ14289 1009 aa8.66□□□□□ -1.02
LDB3-201ENST00000263066 DCAF6Q58WW2 860 aa8.66□□□□□ -1.02
LDB3-201ENST00000263066 GNASQ5JWF2 1037 aa8.66□□□□□ -1.02
LDB3-201ENST00000263066 NSUN6Q8TEA1 469 aaKnown RBP8.66□□□□□ -1.02
LDB3-201ENST00000263066 IFT43Q96FT9 208 aa8.66□□□□□ -1.02
LDB3-201ENST00000263066 SAYSD1Q9NPB0 183 aa8.66□□□□□ -1.02
LDB3-201ENST00000263066 TAS2R1Q9NYW7 299 aa8.66□□□□□ -1.02
LDB3-201ENST00000263066 COQ3Q9NZJ6 369 aa8.66□□□□□ -1.02
LDB3-201ENST00000263066 TMX2Q9Y320 296 aa8.66□□□□□ -1.02
LDB3-201ENST00000263066 STARD13Q9Y3M8 1113 aa8.66□□□□□ -1.02
LDB3-201ENST00000263066 ARAP2Q8WZ64 1704 aa8.66□□□□□ -1.02
LDB3-201ENST00000263066 GOLGA8OA6NCC3 632 aa8.66□□□□□ -1.02
LDB3-201ENST00000263066 GOLGA8NF8WBI6 632 aa8.66□□□□□ -1.02
LDB3-201ENST00000263066 CLIC2O15247 247 aa8.66□□□□□ -1.02
LDB3-201ENST00000263066 ADAM23O75077 832 aa8.66□□□□□ -1.02
LDB3-201ENST00000263066 GNA12Q03113 381 aa8.66□□□□□ -1.02
LDB3-201ENST00000263066 MAPK7Q13164 816 aa8.66□□□□□ -1.02
LDB3-201ENST00000263066 CAMK2BQ13554 666 aa8.66□□□□□ -1.02
LDB3-201ENST00000263066 TRIM25Q14258 630 aaKnown RBP8.66□□□□□ -1.02
LDB3-201ENST00000263066 PON2Q15165 354 aa8.66□□□□□ -1.02
LDB3-201ENST00000263066 STXBP2Q15833 593 aa8.66□□□□□ -1.02
LDB3-201ENST00000263066 EARS2Q5JPH6 523 aaKnown RBP8.66□□□□□ -1.02
LDB3-201ENST00000263066 PAOXQ6QHF9 649 aa8.66□□□□□ -1.02
LDB3-201ENST00000263066 TRMT10CQ7L0Y3 403 aaKnown RBP8.66□□□□□ -1.02
LDB3-201ENST00000263066 SGMS1Q86VZ5 419 aa8.66□□□□□ -1.02
LDB3-201ENST00000263066 ERI1Q8IV48 349 aaKnown RBP8.66□□□□□ -1.02
LDB3-201ENST00000263066 ALDH16A1Q8IZ83 802 aa8.66□□□□□ -1.02
LDB3-201ENST00000263066 SIX6OS1Q8N1H7 587 aa8.66□□□□□ -1.02
LDB3-201ENST00000263066 ACTRT1Q8TDG2 376 aa8.66□□□□□ -1.02
LDB3-201ENST00000263066 PDCD6IPQ8WUM4 868 aaKnown RBP8.66□□□□□ -1.02
LDB3-201ENST00000263066 SLC7A6OSQ96CW6 309 aaPredicted RBP8.66□□□□□ -1.02
LDB3-201ENST00000263066 SPATA33Q96N06 139 aa8.66□□□□□ -1.02
LDB3-201ENST00000263066 C17orf80Q9BSJ5 609 aa8.66□□□□□ -1.02
LDB3-201ENST00000263066 HERC2P3Q9BVR0 1158 aa8.66□□□□□ -1.02
LDB3-201ENST00000263066 WDR11Q9BZH6 1224 aa8.66□□□□□ -1.02
LDB3-201ENST00000263066 RNF19AQ9NV58 838 aa8.66□□□□□ -1.02
LDB3-201ENST00000263066 BARHL2Q9NY43 387 aa8.66□□□□□ -1.02
LDB3-201ENST00000263066 GABBR1Q9UBS5 961 aa8.66□□□□□ -1.02
LDB3-201ENST00000263066 SEPT3Q9UH03 358 aa8.66□□□□□ -1.02
LDB3-201ENST00000263066 TLK1Q9UKI8 766 aa8.66□□□□□ -1.02
LDB3-201ENST00000263066 PACSIN3Q9UKS6 424 aa8.66□□□□□ -1.02
LDB3-201ENST00000263066 NEU2Q9Y3R4 380 aa8.66□□□□□ -1.02
LDB3-201ENST00000263066 AP4B1Q9Y6B7 739 aa8.66□□□□□ -1.02
LDB3-201ENST00000263066 KNL1Q8NG31 2342 aa8.66□□□□□ -1.02
LDB3-201ENST00000263066 MYH10P35580 1976 aa8.66□□□□□ -1.02
LDB3-201ENST00000263066 CEP350Q5VT06 3117 aa8.66□□□□□ -1.02
LDB3-201ENST00000263066 A0A087X0B3 334 aa8.66□□□□□ -1.02
LDB3-201ENST00000263066 SSU72P8A0A1W2PR75 194 aa8.66□□□□□ -1.02
LDB3-201ENST00000263066 ARHGEF37A1IGU5 675 aa8.66□□□□□ -1.02
LDB3-201ENST00000263066 C2orf71A6NGG8 1288 aa8.66□□□□□ -1.02
LDB3-201ENST00000263066 RPA1P27694 616 aa8.66□□□□□ -1.02
LDB3-201ENST00000263066 PCSK6P29122 969 aa8.66□□□□□ -1.02
LDB3-201ENST00000263066 GPC3P51654 580 aa8.66□□□□□ -1.02
LDB3-201ENST00000263066 MAP3K10Q02779 954 aa8.66□□□□□ -1.02
LDB3-201ENST00000263066 SFT2D3Q587I9 215 aa8.66□□□□□ -1.02
LDB3-201ENST00000263066 PPM1LQ5SGD2 360 aa8.66□□□□□ -1.02
LDB3-201ENST00000263066 GPR107Q5VW38 600 aa8.66□□□□□ -1.02
LDB3-201ENST00000263066 CDH24Q86UP0 819 aa8.66□□□□□ -1.02
LDB3-201ENST00000263066 CLIP4Q8N3C7 705 aa8.66□□□□□ -1.02
LDB3-201ENST00000263066 EIF1ADQ8N9N8 165 aaKnown RBP8.66□□□□□ -1.02
LDB3-201ENST00000263066 VPS37AQ8NEZ2 397 aa8.66□□□□□ -1.02
LDB3-201ENST00000263066 TOR1AIP2Q8NFQ8 470 aa8.66□□□□□ -1.02
LDB3-201ENST00000263066 COPS5Q92905 334 aa8.66□□□□□ -1.02
LDB3-201ENST00000263066 GLMNQ92990 594 aa8.66□□□□□ -1.02
LDB3-201ENST00000263066 PARK7Q99497 189 aaKnown RBP8.66□□□□□ -1.02
LDB3-201ENST00000263066 CGREF1Q99674 301 aa8.66□□□□□ -1.02
LDB3-201ENST00000263066 CALN1Q9BXU9 219 aa8.66□□□□□ -1.02
LDB3-201ENST00000263066 AP4S1Q9Y587 144 aa8.66□□□□□ -1.02
LDB3-201ENST00000263066 GOLGA8MH3BSY2 632 aa8.65□□□□□ -1.02
LDB3-201ENST00000263066 TSPAN4O14817 238 aa8.65□□□□□ -1.02
LDB3-201ENST00000263066 EPN2O95208 641 aa8.65□□□□□ -1.02
LDB3-201ENST00000263066 BCL10O95999 233 aa8.65□□□□□ -1.02
LDB3-201ENST00000263066 CPA3P15088 417 aa8.65□□□□□ -1.02
LDB3-201ENST00000263066 RPL21P46778 160 aaKnown RBP8.65□□□□□ -1.02
LDB3-201ENST00000263066 GTF2A2P52657 109 aa8.65□□□□□ -1.02
LDB3-201ENST00000263066 NPEPPSP55786 919 aa8.65□□□□□ -1.02
LDB3-201ENST00000263066 STX1BP61266 288 aa8.65□□□□□ -1.02
LDB3-201ENST00000263066 SEC23AQ15436 765 aa8.65□□□□□ -1.02
LDB3-201ENST00000263066 NRF1Q16656 503 aa8.65□□□□□ -1.02
LDB3-201ENST00000263066 SYCP2LQ5T4T6 812 aa8.65□□□□□ -1.02
LDB3-201ENST00000263066 SDE2Q6IQ49 451 aa8.65□□□□□ -1.02
LDB3-201ENST00000263066 FRA10AC1Q70Z53 315 aa8.65□□□□□ -1.02
LDB3-201ENST00000263066 ULK2Q8IYT8 1036 aa8.65□□□□□ -1.02
LDB3-201ENST00000263066 Q8N9G6 341 aaPredicted RBP8.65□□□□□ -1.02
LDB3-201ENST00000263066 DTX3Q8N9I9 347 aa8.65□□□□□ -1.02
LDB3-201ENST00000263066 OR7G1Q8NGA0 311 aa8.65□□□□□ -1.02
LDB3-201ENST00000263066 C1orf54Q8WWF1 131 aa8.65□□□□□ -1.02
LDB3-201ENST00000263066 MTO1Q9Y2Z2 717 aaKnown RBP8.65□□□□□ -1.02
LDB3-201ENST00000263066 LRP5O75197 1615 aa8.65□□□□□ -1.02
LDB3-201ENST00000263066 TMEM88BA6NKF7 163 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms