RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 OPTNQ96CV9 577 aa12.47□□□□□ -0.41
COL8A1-201ENST00000261037 TMEM120AQ9BXJ8 343 aa12.47□□□□□ -0.41
COL8A1-201ENST00000261037 TMEM245Q9H330 911 aa12.47□□□□□ -0.41
COL8A1-201ENST00000261037 DLGAP2Q9P1A6 1054 aa12.47□□□□□ -0.41
COL8A1-201ENST00000261037 NEURL4Q96JN8 1562 aa12.47□□□□□ -0.41
COL8A1-201ENST00000261037 FER1L4A9Z1Z3 1794 aa12.47□□□□□ -0.41
COL8A1-201ENST00000261037 NDUFB5O43674 189 aa12.47□□□□□ -0.41
COL8A1-201ENST00000261037 CYP2F1P24903 491 aa12.47□□□□□ -0.41
COL8A1-201ENST00000261037 POU1F1P28069 291 aa12.47□□□□□ -0.41
COL8A1-201ENST00000261037 STIP1P31948 543 aaKnown RBP12.47□□□□□ -0.41
COL8A1-201ENST00000261037 SREBF1P36956 1147 aa12.47□□□□□ -0.41
COL8A1-201ENST00000261037 KCNMA1Q12791 1236 aa12.47□□□□□ -0.41
COL8A1-201ENST00000261037 Q4G0T1 1027 aa12.47□□□□□ -0.41
COL8A1-201ENST00000261037 ARHGAP17Q68EM7 881 aa12.47□□□□□ -0.41
COL8A1-201ENST00000261037 ZNF571Q7Z3V5 609 aaPredicted RBP12.47□□□□□ -0.41
COL8A1-201ENST00000261037 MICU2Q8IYU8 434 aa12.47□□□□□ -0.41
COL8A1-201ENST00000261037 ENGASEQ8NFI3 743 aa12.47□□□□□ -0.41
COL8A1-201ENST00000261037 NFKBIZQ9BYH8 718 aa12.47□□□□□ -0.41
COL8A1-201ENST00000261037 C17orf75Q9HAS0 396 aa12.47□□□□□ -0.41
COL8A1-201ENST00000261037 CISHQ9NSE2 258 aa12.47□□□□□ -0.41
COL8A1-201ENST00000261037 APPL1Q9UKG1 709 aa12.47□□□□□ -0.41
COL8A1-201ENST00000261037 JCHAINP01591 159 aa12.47□□□□□ -0.41
COL8A1-201ENST00000261037 THP07101 528 aa12.47□□□□□ -0.41
COL8A1-201ENST00000261037 AQP5P55064 265 aa12.47□□□□□ -0.41
COL8A1-201ENST00000261037 RPL10AP62906 217 aaKnown RBP12.47□□□□□ -0.41
COL8A1-201ENST00000261037 TMEM132BQ14DG7 1078 aa12.47□□□□□ -0.41
COL8A1-201ENST00000261037 NBPF12Q5TAG4 269 aaPredicted RBP12.47□□□□□ -0.41
COL8A1-201ENST00000261037 PCNX4Q63HM2 1172 aa12.47□□□□□ -0.41
COL8A1-201ENST00000261037 TFAP2DQ7Z6R9 452 aa12.47□□□□□ -0.41
COL8A1-201ENST00000261037 LPCAT1Q8NF37 534 aa12.47□□□□□ -0.41
COL8A1-201ENST00000261037 RXFP2Q8WXD0 754 aa12.47□□□□□ -0.41
COL8A1-201ENST00000261037 ANKRD7Q92527 254 aa12.47□□□□□ -0.41
COL8A1-201ENST00000261037 USP13Q92995 863 aaPredicted RBP12.47□□□□□ -0.41
COL8A1-201ENST00000261037 AKT1S1Q96B36 256 aa12.47□□□□□ -0.41
COL8A1-201ENST00000261037 MED8Q96G25 268 aa12.47□□□□□ -0.41
COL8A1-201ENST00000261037 MAGEB18Q96M61 343 aa12.47□□□□□ -0.41
COL8A1-201ENST00000261037 TSEN34Q9BSV6 310 aaKnown RBP12.47□□□□□ -0.41
COL8A1-201ENST00000261037 CIPCQ9C0C6 399 aa12.47□□□□□ -0.41
COL8A1-201ENST00000261037 PDGFCQ9NRA1 345 aa12.47□□□□□ -0.41
COL8A1-201ENST00000261037 IMPAD1Q9NX62 359 aa12.47□□□□□ -0.41
COL8A1-201ENST00000261037 DYRK1BQ9Y463 629 aa12.47□□□□□ -0.41
COL8A1-201ENST00000261037 GNG14A0A1W2PPG7 69 aa12.46□□□□□ -0.41
COL8A1-201ENST00000261037 ATP6V1B2P21281 511 aa12.46□□□□□ -0.41
COL8A1-201ENST00000261037 PSMC6P62333 389 aa12.46□□□□□ -0.41
COL8A1-201ENST00000261037 STARD3Q14849 445 aa12.46□□□□□ -0.41
COL8A1-201ENST00000261037 SLC15A2Q16348 729 aa12.46□□□□□ -0.41
COL8A1-201ENST00000261037 C9orf131Q5VYM1 1079 aa12.46□□□□□ -0.41
COL8A1-201ENST00000261037 TRIM69Q86WT6 500 aa12.46□□□□□ -0.41
COL8A1-201ENST00000261037 COLGALT1Q8NBJ5 622 aa12.46□□□□□ -0.41
COL8A1-201ENST00000261037 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.46□□□□□ -0.41
COL8A1-201ENST00000261037 RTFDC1Q9BY42 306 aaPredicted RBP12.46□□□□□ -0.41
COL8A1-201ENST00000261037 UBE2OQ9C0C9 1292 aaKnown RBP12.46□□□□□ -0.41
COL8A1-201ENST00000261037 CLPBQ9H078 707 aa12.46□□□□□ -0.41
COL8A1-201ENST00000261037 RMND5AQ9H871 391 aa12.46□□□□□ -0.41
COL8A1-201ENST00000261037 DDX43Q9NXZ2 648 aaKnown RBP12.46□□□□□ -0.41
COL8A1-201ENST00000261037 FZD1Q9UP38 647 aa12.46□□□□□ -0.41
COL8A1-201ENST00000261037 SNX13Q9Y5W8 968 aa12.46□□□□□ -0.41
COL8A1-201ENST00000261037 UBXN8O00124 270 aa12.46□□□□□ -0.41
COL8A1-201ENST00000261037 GAS2O43903 313 aaKnown RBP12.46□□□□□ -0.41
COL8A1-201ENST00000261037 EGFRP00533 1210 aa12.46□□□□□ -0.41
COL8A1-201ENST00000261037 URODP06132 367 aa12.46□□□□□ -0.41
COL8A1-201ENST00000261037 APOA4P06727 396 aa12.46□□□□□ -0.41
COL8A1-201ENST00000261037 MAPK9P45984 424 aa12.46□□□□□ -0.41
COL8A1-201ENST00000261037 SEMA4DQ92854 862 aa12.46□□□□□ -0.41
COL8A1-201ENST00000261037 TBC1D23Q9NUY8 699 aa12.46□□□□□ -0.41
COL8A1-201ENST00000261037 VPS9D1Q9Y2B5 631 aa12.46□□□□□ -0.41
COL8A1-201ENST00000261037 DEPDC5O75140 1603 aa12.46□□□□□ -0.41
COL8A1-201ENST00000261037 TMEM150BA6NC51 233 aa12.46□□□□□ -0.41
COL8A1-201ENST00000261037 ERI2A8K979 691 aaKnown RBP12.46□□□□□ -0.41
COL8A1-201ENST00000261037 KATNA1O75449 491 aa12.46□□□□□ -0.41
COL8A1-201ENST00000261037 ABCB1P08183 1280 aaPredicted RBP12.46□□□□□ -0.41
COL8A1-201ENST00000261037 HALP42357 657 aa12.46□□□□□ -0.41
COL8A1-201ENST00000261037 ACOX2Q99424 681 aa12.46□□□□□ -0.41
COL8A1-201ENST00000261037 CDC42EP4Q9H3Q1 356 aaKnown RBP12.46□□□□□ -0.41
COL8A1-201ENST00000261037 OLFML3Q9NRN5 406 aa12.46□□□□□ -0.41
COL8A1-201ENST00000261037 UTP6Q9NYH9 597 aaKnown RBP12.46□□□□□ -0.41
COL8A1-201ENST00000261037 SNX8Q9Y5X2 465 aa12.46□□□□□ -0.41
COL8A1-201ENST00000261037 F8VZ95 297 aa12.46□□□□□ -0.42
COL8A1-201ENST00000261037 WDR49Q8IV35 697 aa12.46□□□□□ -0.42
COL8A1-201ENST00000261037 DNAJB3Q8WWF6 145 aa12.46□□□□□ -0.42
COL8A1-201ENST00000261037 NOD2Q9HC29 1040 aa12.46□□□□□ -0.42
COL8A1-201ENST00000261037 PADI4Q9UM07 663 aa12.46□□□□□ -0.42
COL8A1-201ENST00000261037 VWDEQ8N2E2 1590 aa12.46□□□□□ -0.42
COL8A1-201ENST00000261037 PYGMP11217 842 aa12.46□□□□□ -0.42
COL8A1-201ENST00000261037 VHLP40337 213 aa12.46□□□□□ -0.42
COL8A1-201ENST00000261037 SCNN1BP51168 640 aa12.46□□□□□ -0.42
COL8A1-201ENST00000261037 CYLC2Q14093 348 aaPredicted RBP12.46□□□□□ -0.42
COL8A1-201ENST00000261037 PDPK2PQ6A1A2 396 aa12.46□□□□□ -0.42
COL8A1-201ENST00000261037 KDM7AQ6ZMT4 941 aa12.46□□□□□ -0.42
COL8A1-201ENST00000261037 ARHGEF19Q8IW93 802 aa12.46□□□□□ -0.42
COL8A1-201ENST00000261037 PGLYRP2Q96PD5 576 aa12.46□□□□□ -0.42
COL8A1-201ENST00000261037 CARD9Q9H257 536 aa12.46□□□□□ -0.42
COL8A1-201ENST00000261037 LRRC40Q9H9A6 602 aa12.46□□□□□ -0.42
COL8A1-201ENST00000261037 TMBIM4Q9HC24 238 aa12.46□□□□□ -0.42
COL8A1-201ENST00000261037 RPS6KB2Q9UBS0 482 aa12.46□□□□□ -0.42
COL8A1-201ENST00000261037 TBKBP1A7MCY6 615 aa12.45□□□□□ -0.42
COL8A1-201ENST00000261037 MEI4A8MW99 385 aa12.45□□□□□ -0.42
COL8A1-201ENST00000261037 CCNT2O60583 730 aaKnown RBP12.45□□□□□ -0.42
COL8A1-201ENST00000261037 ZNF284Q2VY69 593 aa12.45□□□□□ -0.42
COL8A1-201ENST00000261037 HERC6Q8IVU3 1022 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms