RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 PATJQ8NI35 1801 aa17.6■□□□□ 0.41
SDCBP-201ENST00000260130 GOLGA6L9A6NEM1 432 aa17.6■□□□□ 0.41
SDCBP-201ENST00000260130 TMEM221A6NGB7 291 aa17.6■□□□□ 0.41
SDCBP-201ENST00000260130 M0R296 226 aa17.6■□□□□ 0.41
SDCBP-201ENST00000260130 CHADO15335 359 aa17.6■□□□□ 0.41
SDCBP-201ENST00000260130 TLR5O60602 858 aa17.6■□□□□ 0.41
SDCBP-201ENST00000260130 GPR37L1O60883 481 aa17.6■□□□□ 0.41
SDCBP-201ENST00000260130 CYP11B1P15538 503 aa17.6■□□□□ 0.41
SDCBP-201ENST00000260130 JAM2P57087 298 aa17.6■□□□□ 0.41
SDCBP-201ENST00000260130 ARHGAP29Q52LW3 1261 aa17.6■□□□□ 0.41
SDCBP-201ENST00000260130 STK32AQ8WU08 396 aa17.6■□□□□ 0.41
SDCBP-201ENST00000260130 C11orf16Q9NQ32 467 aa17.6■□□□□ 0.41
SDCBP-201ENST00000260130 CYLDQ9NQC7 956 aa17.6■□□□□ 0.41
SDCBP-201ENST00000260130 CNGB3Q9NQW8 809 aa17.6■□□□□ 0.41
SDCBP-201ENST00000260130 ZNF638Q14966 1978 aaKnown RBP17.6■□□□□ 0.41
SDCBP-201ENST00000260130 DENND4CQ5VZ89 1909 aa17.6■□□□□ 0.41
SDCBP-201ENST00000260130 A0A1W2PQC6 194 aa17.59■□□□□ 0.41
SDCBP-201ENST00000260130 GABBR2O75899 941 aa17.59■□□□□ 0.41
SDCBP-201ENST00000260130 MBL2P11226 248 aaPredicted RBP17.59■□□□□ 0.41
SDCBP-201ENST00000260130 LCP1P13796 627 aa17.59■□□□□ 0.41
SDCBP-201ENST00000260130 SCML4Q8N228 414 aa17.59■□□□□ 0.41
SDCBP-201ENST00000260130 ARHGAP18Q8N392 663 aa17.59■□□□□ 0.41
SDCBP-201ENST00000260130 SH3RF2Q8TEC5 729 aa17.59■□□□□ 0.41
SDCBP-201ENST00000260130 NACA2Q9H009 215 aa17.59■□□□□ 0.41
SDCBP-201ENST00000260130 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.59■□□□□ 0.41
SDCBP-201ENST00000260130 FAM53CQ9NYF3 392 aa17.59■□□□□ 0.41
SDCBP-201ENST00000260130 CLIC5Q9NZA1 410 aa17.59■□□□□ 0.41
SDCBP-201ENST00000260130 DNAI1Q9UI46 699 aa17.59■□□□□ 0.41
SDCBP-201ENST00000260130 CPQQ9Y646 472 aa17.59■□□□□ 0.41
SDCBP-201ENST00000260130 FAM86C2PA6NEL3 165 aa17.59■□□□□ 0.41
SDCBP-201ENST00000260130 RARGP13631 454 aa17.59■□□□□ 0.41
SDCBP-201ENST00000260130 TCF3P15923 654 aa17.59■□□□□ 0.41
SDCBP-201ENST00000260130 H2AFXP16104 143 aaPredicted RBP17.59■□□□□ 0.41
SDCBP-201ENST00000260130 SOX5P35711 763 aa17.59■□□□□ 0.41
SDCBP-201ENST00000260130 STAT1P42224 750 aa17.59■□□□□ 0.41
SDCBP-201ENST00000260130 RPL34P49207 117 aaKnown RBP17.59■□□□□ 0.41
SDCBP-201ENST00000260130 ZXDBP98169 803 aa17.59■□□□□ 0.41
SDCBP-201ENST00000260130 ZNF276Q8N554 614 aa17.59■□□□□ 0.41
SDCBP-201ENST00000260130 TTC16Q8NEE8 873 aa17.59■□□□□ 0.41
SDCBP-201ENST00000260130 RIN3Q8TB24 985 aa17.59■□□□□ 0.41
SDCBP-201ENST00000260130 NDRG1Q92597 394 aaKnown RBP17.59■□□□□ 0.41
SDCBP-201ENST00000260130 DNASE1L2Q92874 299 aa17.59■□□□□ 0.41
SDCBP-201ENST00000260130 LHX5Q9H2C1 402 aa17.59■□□□□ 0.41
SDCBP-201ENST00000260130 TRPV5Q9NQA5 729 aa17.59■□□□□ 0.41
SDCBP-201ENST00000260130 ST7Q9NRC1 585 aa17.59■□□□□ 0.41
SDCBP-201ENST00000260130 PIK3R2O00459 728 aa17.58■□□□□ 0.4
SDCBP-201ENST00000260130 GFPT2O94808 682 aa17.58■□□□□ 0.4
SDCBP-201ENST00000260130 RALAP11233 206 aa17.58■□□□□ 0.4
SDCBP-201ENST00000260130 ATP5C1P36542 298 aaKnown RBP17.58■□□□□ 0.4
SDCBP-201ENST00000260130 YWHAGP61981 247 aaKnown RBP eCLIP17.58■□□□□ 0.4
SDCBP-201ENST00000260130 ZNF77Q15935 545 aa17.58■□□□□ 0.4
SDCBP-201ENST00000260130 ERCC6LQ2NKX8 1250 aa17.58■□□□□ 0.4
SDCBP-201ENST00000260130 CC2D1AQ6P1N0 951 aaPredicted RBP17.58■□□□□ 0.4
SDCBP-201ENST00000260130 CACNA2D4Q7Z3S7 1137 aa17.58■□□□□ 0.4
SDCBP-201ENST00000260130 WDTC1Q8N5D0 677 aa17.58■□□□□ 0.4
SDCBP-201ENST00000260130 ZFYVE19Q96K21 471 aa17.58■□□□□ 0.4
SDCBP-201ENST00000260130 SMPD4Q9NXE4 827 aa17.58■□□□□ 0.4
SDCBP-201ENST00000260130 CYTH4Q9UIA0 394 aa17.58■□□□□ 0.4
SDCBP-201ENST00000260130 CA14Q9ULX7 337 aa17.58■□□□□ 0.4
SDCBP-201ENST00000260130 NUP210Q8TEM1 1887 aaPredicted RBP17.58■□□□□ 0.4
SDCBP-201ENST00000260130 ANAPC1Q9H1A4 1944 aa17.58■□□□□ 0.4
SDCBP-201ENST00000260130 LEFTY2O00292 366 aa17.57■□□□□ 0.4
SDCBP-201ENST00000260130 ARNTLO00327 626 aa17.57■□□□□ 0.4
SDCBP-201ENST00000260130 TBX18O95935 607 aa17.57■□□□□ 0.4
SDCBP-201ENST00000260130 ACADSBP45954 432 aa17.57■□□□□ 0.4
SDCBP-201ENST00000260130 USP4Q13107 963 aa17.57■□□□□ 0.4
SDCBP-201ENST00000260130 MTF1Q14872 753 aa17.57■□□□□ 0.4
SDCBP-201ENST00000260130 SLC44A4Q53GD3 710 aa17.57■□□□□ 0.4
SDCBP-201ENST00000260130 TMEM31Q5JXX7 168 aa17.57■□□□□ 0.4
SDCBP-201ENST00000260130 BHLHA9Q7RTU4 235 aa17.57■□□□□ 0.4
SDCBP-201ENST00000260130 TADA2BQ86TJ2 420 aa17.57■□□□□ 0.4
SDCBP-201ENST00000260130 PASD1Q8IV76 773 aa17.57■□□□□ 0.4
SDCBP-201ENST00000260130 REXO1L1PQ8IX06 675 aa17.57■□□□□ 0.4
SDCBP-201ENST00000260130 SIX5Q8N196 739 aa17.57■□□□□ 0.4
SDCBP-201ENST00000260130 SLC4A5Q9BY07 1137 aa17.57■□□□□ 0.4
SDCBP-201ENST00000260130 GKN1Q9NS71 199 aa17.57■□□□□ 0.4
SDCBP-201ENST00000260130 DAOAP59103 153 aa17.57■□□□□ 0.4
SDCBP-201ENST00000260130 TBX2Q13207 712 aaPredicted RBP17.57■□□□□ 0.4
SDCBP-201ENST00000260130 KLHDC10Q6PID8 442 aa17.57■□□□□ 0.4
SDCBP-201ENST00000260130 BMP8AQ7Z5Y6 402 aa17.57■□□□□ 0.4
SDCBP-201ENST00000260130 TMEM110Q86TL2 294 aa17.57■□□□□ 0.4
SDCBP-201ENST00000260130 CDK5RAP1Q96SZ6 601 aaKnown RBP17.57■□□□□ 0.4
SDCBP-201ENST00000260130 ARHGEF3Q9NR81 526 aa17.57■□□□□ 0.4
SDCBP-201ENST00000260130 NUDT5Q9UKK9 219 aa17.57■□□□□ 0.4
SDCBP-201ENST00000260130 TECTAO75443 2155 aa17.56■□□□□ 0.4
SDCBP-201ENST00000260130 KRBA1A5PL33 1030 aa17.56■□□□□ 0.4
SDCBP-201ENST00000260130 YJEFN3A6XGL0 299 aa17.56■□□□□ 0.4
SDCBP-201ENST00000260130 PRR33A8MZF0 331 aa17.56■□□□□ 0.4
SDCBP-201ENST00000260130 E7ENQ6 273 aa17.56■□□□□ 0.4
SDCBP-201ENST00000260130 FBXO21O94952 628 aa17.56■□□□□ 0.4
SDCBP-201ENST00000260130 TPM1P09493 284 aa17.56■□□□□ 0.4
SDCBP-201ENST00000260130 C10orf120Q5SQS8 335 aa17.56■□□□□ 0.4
SDCBP-201ENST00000260130 IER5LQ5T953 404 aa17.56■□□□□ 0.4
SDCBP-201ENST00000260130 SPECC1LQ69YQ0 1117 aa17.56■□□□□ 0.4
SDCBP-201ENST00000260130 NOP9Q86U38 636 aaKnown RBP17.56■□□□□ 0.4
SDCBP-201ENST00000260130 DDX42Q86XP3 938 aaKnown RBP eCLIP17.56■□□□□ 0.4
SDCBP-201ENST00000260130 SCUBE3Q8IX30 993 aa17.56■□□□□ 0.4
SDCBP-201ENST00000260130 MNS1Q8NEH6 495 aa17.56■□□□□ 0.4
SDCBP-201ENST00000260130 EPS8L1Q8TE68 723 aa17.56■□□□□ 0.4
SDCBP-201ENST00000260130 IRGQQ8WZA9 623 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms