RNA–Protein interactions for RNA: ENST00000258888.5

ALPK3-201, Transcript of alpha kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALPK3, Length 10,917 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3-201ENST00000258888 NCALDP61601 193 aa13.85□□□□□ -0.19
ALPK3-201ENST00000258888 PTPN11Q06124 597 aaPredicted RBP13.85□□□□□ -0.19
ALPK3-201ENST00000258888 TMC3Q7Z5M5 1100 aa13.85□□□□□ -0.19
ALPK3-201ENST00000258888 RXFP1Q9HBX9 757 aa13.85□□□□□ -0.19
ALPK3-201ENST00000258888 LRRIQ1Q96JM4 1722 aa13.85□□□□□ -0.19
ALPK3-201ENST00000258888 TECPR2O15040 1411 aa13.85□□□□□ -0.19
ALPK3-201ENST00000258888 B3GAT3O94766 335 aa13.85□□□□□ -0.19
ALPK3-201ENST00000258888 BAIAP3O94812 1187 aa13.85□□□□□ -0.19
ALPK3-201ENST00000258888 CHRNB3Q05901 458 aa13.85□□□□□ -0.19
ALPK3-201ENST00000258888 N4BP2L1Q5TBK1 243 aaPredicted RBP13.85□□□□□ -0.19
ALPK3-201ENST00000258888 HDAC7Q8WUI4 952 aa13.85□□□□□ -0.19
ALPK3-201ENST00000258888 SCUBE2Q9NQ36 999 aa13.85□□□□□ -0.19
ALPK3-201ENST00000258888 NAALADL1Q9UQQ1 740 aa13.85□□□□□ -0.19
ALPK3-201ENST00000258888 CAB39Q9Y376 341 aaPredicted RBP13.85□□□□□ -0.19
ALPK3-201ENST00000258888 ICE1Q9Y2F5 2266 aa13.85□□□□□ -0.19
ALPK3-201ENST00000258888 ZNF286BP0CG31 522 aa13.84□□□□□ -0.19
ALPK3-201ENST00000258888 PEX5P50542 639 aa13.84□□□□□ -0.19
ALPK3-201ENST00000258888 CYP2W1Q8TAV3 490 aa13.84□□□□□ -0.19
ALPK3-201ENST00000258888 GTF3C2Q8WUA4 911 aaPredicted RBP13.84□□□□□ -0.19
ALPK3-201ENST00000258888 FBXO32Q969P5 355 aa13.84□□□□□ -0.19
ALPK3-201ENST00000258888 ZNF844Q08AG5 666 aa13.84□□□□□ -0.19
ALPK3-201ENST00000258888 SLC30A10Q6XR72 485 aa13.84□□□□□ -0.19
ALPK3-201ENST00000258888 LRRC8DQ7L1W4 858 aa13.84□□□□□ -0.19
ALPK3-201ENST00000258888 DEFB107AQ8IZN7 70 aa13.84□□□□□ -0.19
ALPK3-201ENST00000258888 TMC2Q8TDI7 906 aa13.84□□□□□ -0.19
ALPK3-201ENST00000258888 PIF1Q9H611 641 aa13.84□□□□□ -0.19
ALPK3-201ENST00000258888 MT-CO1P00395 513 aa13.84□□□□□ -0.19
ALPK3-201ENST00000258888 DPEP1P16444 411 aa13.84□□□□□ -0.19
ALPK3-201ENST00000258888 ZNF157P51786 506 aaPredicted RBP13.84□□□□□ -0.19
ALPK3-201ENST00000258888 EFEMP1Q12805 493 aa13.84□□□□□ -0.19
ALPK3-201ENST00000258888 PAN2Q504Q3 1202 aaKnown RBP13.84□□□□□ -0.19
ALPK3-201ENST00000258888 CCNJLQ8IV13 435 aa13.84□□□□□ -0.19
ALPK3-201ENST00000258888 PGBD3Q8N328 593 aa13.84□□□□□ -0.19
ALPK3-201ENST00000258888 ZNF518BQ9C0D4 1074 aa13.84□□□□□ -0.19
ALPK3-201ENST00000258888 ENDOD1O94919 500 aa13.84□□□□□ -0.19
ALPK3-201ENST00000258888 CXCL8P10145 99 aa13.84□□□□□ -0.19
ALPK3-201ENST00000258888 CYP2F1P24903 491 aa13.84□□□□□ -0.19
ALPK3-201ENST00000258888 CCNG2Q16589 344 aa13.84□□□□□ -0.19
ALPK3-201ENST00000258888 PGS1Q32NB8 556 aa13.84□□□□□ -0.19
ALPK3-201ENST00000258888 USP13Q92995 863 aaPredicted RBP13.84□□□□□ -0.19
ALPK3-201ENST00000258888 MPP6Q9NZW5 540 aa13.84□□□□□ -0.19
ALPK3-201ENST00000258888 SLC24A2Q9UI40 661 aa13.84□□□□□ -0.19
ALPK3-201ENST00000258888 APPL1Q9UKG1 709 aa13.84□□□□□ -0.19
ALPK3-201ENST00000258888 F5H5T6 163 aa13.84□□□□□ -0.19
ALPK3-201ENST00000258888 GSNP06396 782 aa13.84□□□□□ -0.19
ALPK3-201ENST00000258888 DCLRE1BQ9H816 532 aa13.84□□□□□ -0.19
ALPK3-201ENST00000258888 PCDHB7Q9Y5E2 793 aa13.84□□□□□ -0.19
ALPK3-201ENST00000258888 CAP2P40123 477 aa13.84□□□□□ -0.19
ALPK3-201ENST00000258888 ABRAQ8N0Z2 381 aa13.84□□□□□ -0.19
ALPK3-201ENST00000258888 RTFDC1Q9BY42 306 aaPredicted RBP13.84□□□□□ -0.19
ALPK3-201ENST00000258888 C6orf203Q9P0P8 240 aaPredicted RBP13.84□□□□□ -0.19
ALPK3-201ENST00000258888 HEATR1Q9H583 2144 aaKnown RBP13.84□□□□□ -0.19
ALPK3-201ENST00000258888 ABCA9Q8IUA7 1624 aa13.84□□□□□ -0.19
ALPK3-201ENST00000258888 CENPAP49450 140 aa13.84□□□□□ -0.19
ALPK3-201ENST00000258888 AGKQ53H12 422 aa13.84□□□□□ -0.19
ALPK3-201ENST00000258888 TATDN2Q93075 761 aa13.84□□□□□ -0.19
ALPK3-201ENST00000258888 VANGL2Q9ULK5 521 aa13.84□□□□□ -0.19
ALPK3-201ENST00000258888 SHOC2Q9UQ13 582 aa13.84□□□□□ -0.19
ALPK3-201ENST00000258888 TM9SF1O15321 606 aa13.84□□□□□ -0.19
ALPK3-201ENST00000258888 CPA3P15088 417 aa13.84□□□□□ -0.19
ALPK3-201ENST00000258888 SLC11A2P49281 568 aa13.84□□□□□ -0.19
ALPK3-201ENST00000258888 ERVK-9P63128 1117 aa13.84□□□□□ -0.19
ALPK3-201ENST00000258888 UGT3A1Q6NUS8 523 aa13.84□□□□□ -0.19
ALPK3-201ENST00000258888 ILDR1Q86SU0 546 aaPredicted RBP13.84□□□□□ -0.19
ALPK3-201ENST00000258888 SLC5A5Q92911 643 aa13.84□□□□□ -0.19
ALPK3-201ENST00000258888 AGO4Q9HCK5 861 aaKnown RBP13.84□□□□□ -0.19
ALPK3-201ENST00000258888 LINC00854A0A1B0GVQ3 168 aa13.84□□□□□ -0.19
ALPK3-201ENST00000258888 CSHL1Q14406 222 aa13.84□□□□□ -0.19
ALPK3-201ENST00000258888 SKIV2LQ15477 1246 aaKnown RBP13.84□□□□□ -0.19
ALPK3-201ENST00000258888 SLC44A2Q8IWA5 706 aaPredicted RBP13.84□□□□□ -0.19
ALPK3-201ENST00000258888 SAC3D1A6NKF1 404 aa13.83□□□□□ -0.19
ALPK3-201ENST00000258888 RGS5O15539 181 aa13.83□□□□□ -0.19
ALPK3-201ENST00000258888 RIPK2O43353 540 aa13.83□□□□□ -0.19
ALPK3-201ENST00000258888 PTPN4P29074 926 aa13.83□□□□□ -0.19
ALPK3-201ENST00000258888 ARL4DP49703 201 aa13.83□□□□□ -0.19
ALPK3-201ENST00000258888 C1QBPQ07021 282 aaKnown RBP13.83□□□□□ -0.19
ALPK3-201ENST00000258888 ATP6AP1LQ52LC2 224 aa13.83□□□□□ -0.19
ALPK3-201ENST00000258888 TRAF7Q6Q0C0 670 aa13.83□□□□□ -0.19
ALPK3-201ENST00000258888 WDR49Q8IV35 697 aa13.83□□□□□ -0.19
ALPK3-201ENST00000258888 GMCL1P1Q8NEA9 526 aa13.83□□□□□ -0.19
ALPK3-201ENST00000258888 ZFP42Q96MM3 310 aa13.83□□□□□ -0.19
ALPK3-201ENST00000258888 PIH1D1Q9NWS0 290 aaKnown RBP13.83□□□□□ -0.19
ALPK3-201ENST00000258888 MLNP12872 115 aa13.83□□□□□ -0.2
ALPK3-201ENST00000258888 ELK3P41970 407 aa13.83□□□□□ -0.2
ALPK3-201ENST00000258888 RPL21P46778 160 aaKnown RBP13.83□□□□□ -0.2
ALPK3-201ENST00000258888 TTLL9Q3SXZ7 439 aa13.83□□□□□ -0.2
ALPK3-201ENST00000258888 CELF6Q96J87 481 aaKnown RBP13.83□□□□□ -0.2
ALPK3-201ENST00000258888 LMTK2Q8IWU2 1503 aa13.83□□□□□ -0.2
ALPK3-201ENST00000258888 MCOLN2Q8IZK6 566 aa13.83□□□□□ -0.2
ALPK3-201ENST00000258888 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.83□□□□□ -0.2
ALPK3-201ENST00000258888 SPATA16Q9BXB7 569 aa13.83□□□□□ -0.2
ALPK3-201ENST00000258888 PCDH9Q9HC56 1237 aa13.83□□□□□ -0.2
ALPK3-201ENST00000258888 RFX3P48380 749 aa13.83□□□□□ -0.2
ALPK3-201ENST00000258888 NMD3Q96D46 503 aaKnown RBP13.83□□□□□ -0.2
ALPK3-201ENST00000258888 RERGLQ9H628 205 aa13.83□□□□□ -0.2
ALPK3-201ENST00000258888 CETPP11597 493 aa13.83□□□□□ -0.2
ALPK3-201ENST00000258888 OXCT1P55809 520 aa13.83□□□□□ -0.2
ALPK3-201ENST00000258888 SV2AQ7L0J3 742 aa13.83□□□□□ -0.2
ALPK3-201ENST00000258888 PRCCQ92733 491 aaPredicted RBP13.83□□□□□ -0.2
ALPK3-201ENST00000258888 PDPK2PQ6A1A2 396 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms