RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 ELP6Q0PNE2 266 aa13.89□□□□□ -0.19
PRPF38A-201ENST00000257181 PRPF39Q86UA1 669 aaKnown RBP13.89□□□□□ -0.19
PRPF38A-201ENST00000257181 FUBP3Q96I24 572 aaKnown RBP eCLIP13.89□□□□□ -0.19
PRPF38A-201ENST00000257181 CLPBQ9H078 707 aa13.89□□□□□ -0.19
PRPF38A-201ENST00000257181 PLEKHA4Q9H4M7 779 aa13.89□□□□□ -0.19
PRPF38A-201ENST00000257181 ELAC1Q9H777 363 aaKnown RBP13.89□□□□□ -0.19
PRPF38A-201ENST00000257181 GPRC5CQ9NQ84 441 aa13.89□□□□□ -0.19
PRPF38A-201ENST00000257181 AIPL1Q9NZN9 384 aa13.89□□□□□ -0.19
PRPF38A-201ENST00000257181 APOBEC2Q9Y235 224 aaKnown RBP13.89□□□□□ -0.19
PRPF38A-201ENST00000257181 OR56A5P0C7T3 313 aa13.88□□□□□ -0.19
PRPF38A-201ENST00000257181 HSPA1AP0DMV8 641 aaKnown RBP13.88□□□□□ -0.19
PRPF38A-201ENST00000257181 HSPA1BP0DMV9 641 aaKnown RBP13.88□□□□□ -0.19
PRPF38A-201ENST00000257181 VEGFBP49765 207 aa13.88□□□□□ -0.19
PRPF38A-201ENST00000257181 GUCY2FP51841 1108 aa13.88□□□□□ -0.19
PRPF38A-201ENST00000257181 NDST1P52848 882 aa13.88□□□□□ -0.19
PRPF38A-201ENST00000257181 SPARCL1Q14515 664 aa13.88□□□□□ -0.19
PRPF38A-201ENST00000257181 ZRANB3Q5FWF4 1079 aa13.88□□□□□ -0.19
PRPF38A-201ENST00000257181 MARC1Q5VT66 337 aa13.88□□□□□ -0.19
PRPF38A-201ENST00000257181 RABEPKQ7Z6M1 372 aa13.88□□□□□ -0.19
PRPF38A-201ENST00000257181 BEND7Q8N7W2 519 aaPredicted RBP13.88□□□□□ -0.19
PRPF38A-201ENST00000257181 PLD4Q96BZ4 506 aa13.88□□□□□ -0.19
PRPF38A-201ENST00000257181 TIFAQ96CG3 184 aa13.88□□□□□ -0.19
PRPF38A-201ENST00000257181 YY1AP1Q9H869 796 aa13.88□□□□□ -0.19
PRPF38A-201ENST00000257181 LATS2Q9NRM7 1088 aa13.88□□□□□ -0.19
PRPF38A-201ENST00000257181 PLCH1Q4KWH8 1693 aa13.88□□□□□ -0.19
PRPF38A-201ENST00000257181 ERI2A8K979 691 aaKnown RBP13.88□□□□□ -0.19
PRPF38A-201ENST00000257181 NDUFAB1O14561 156 aa13.88□□□□□ -0.19
PRPF38A-201ENST00000257181 GUCY1B2O75343 617 aa13.88□□□□□ -0.19
PRPF38A-201ENST00000257181 CNTFP26441 200 aa13.88□□□□□ -0.19
PRPF38A-201ENST00000257181 PIK3CGP48736 1102 aa13.88□□□□□ -0.19
PRPF38A-201ENST00000257181 CNGA2Q16280 664 aa13.88□□□□□ -0.19
PRPF38A-201ENST00000257181 ERMARDQ5T6L9 678 aa13.88□□□□□ -0.19
PRPF38A-201ENST00000257181 ADCK2Q7Z695 626 aa13.88□□□□□ -0.19
PRPF38A-201ENST00000257181 MYO1HQ8N1T3 1032 aa13.88□□□□□ -0.19
PRPF38A-201ENST00000257181 PHOSPHO2Q8TCD6 241 aa13.88□□□□□ -0.19
PRPF38A-201ENST00000257181 CNGB3Q9NQW8 809 aa13.88□□□□□ -0.19
PRPF38A-201ENST00000257181 CDH8P55286 799 aa13.88□□□□□ -0.19
PRPF38A-201ENST00000257181 DHX9Q08211 1270 aaKnown RBP13.88□□□□□ -0.19
PRPF38A-201ENST00000257181 CPA5Q8WXQ8 436 aa13.88□□□□□ -0.19
PRPF38A-201ENST00000257181 RAD9AQ99638 391 aa13.88□□□□□ -0.19
PRPF38A-201ENST00000257181 ZFP14Q9HCL3 533 aa13.88□□□□□ -0.19
PRPF38A-201ENST00000257181 EPB41L5Q9HCM4 733 aa13.88□□□□□ -0.19
PRPF38A-201ENST00000257181 AVENQ9NQS1 362 aaPredicted RBP13.88□□□□□ -0.19
PRPF38A-201ENST00000257181 GJB4Q9NTQ9 266 aa13.88□□□□□ -0.19
PRPF38A-201ENST00000257181 AP4E1Q9UPM8 1137 aa13.88□□□□□ -0.19
PRPF38A-201ENST00000257181 HBS1LQ9Y450 684 aaKnown RBP13.88□□□□□ -0.19
PRPF38A-201ENST00000257181 GCATO75600 419 aa13.88□□□□□ -0.19
PRPF38A-201ENST00000257181 CYP2A7P20853 494 aa13.88□□□□□ -0.19
PRPF38A-201ENST00000257181 FNTAP49354 379 aa13.88□□□□□ -0.19
PRPF38A-201ENST00000257181 PDGFRLQ15198 375 aa13.88□□□□□ -0.19
PRPF38A-201ENST00000257181 HYIQ5T013 277 aa13.88□□□□□ -0.19
PRPF38A-201ENST00000257181 PALB2Q86YC2 1186 aa13.88□□□□□ -0.19
PRPF38A-201ENST00000257181 CMTR2Q8IYT2 770 aaKnown RBP13.88□□□□□ -0.19
PRPF38A-201ENST00000257181 TMEM237Q96Q45 408 aa13.88□□□□□ -0.19
PRPF38A-201ENST00000257181 GMLQ99445 158 aa13.88□□□□□ -0.19
PRPF38A-201ENST00000257181 CCDC3Q9BQI4 270 aa13.88□□□□□ -0.19
PRPF38A-201ENST00000257181 UPF3AQ9H1J1 476 aaKnown RBP13.88□□□□□ -0.19
PRPF38A-201ENST00000257181 INTS9Q9NV88 658 aaKnown RBP13.88□□□□□ -0.19
PRPF38A-201ENST00000257181 ALS2Q96Q42 1657 aa13.88□□□□□ -0.19
PRPF38A-201ENST00000257181 PKN3Q6P5Z2 889 aa13.87□□□□□ -0.19
PRPF38A-201ENST00000257181 TRIM65Q6PJ69 517 aa13.87□□□□□ -0.19
PRPF38A-201ENST00000257181 PHACTR4Q8IZ21 702 aa13.87□□□□□ -0.19
PRPF38A-201ENST00000257181 PI4K2AQ9BTU6 479 aa13.87□□□□□ -0.19
PRPF38A-201ENST00000257181 ST6GALNAC4Q9H4F1 302 aa13.87□□□□□ -0.19
PRPF38A-201ENST00000257181 OGFRQ9NZT2 677 aa13.87□□□□□ -0.19
PRPF38A-201ENST00000257181 SGPL1O95470 568 aa13.87□□□□□ -0.19
PRPF38A-201ENST00000257181 PSMC6P62333 389 aa13.87□□□□□ -0.19
PRPF38A-201ENST00000257181 NAB1Q13506 487 aa13.87□□□□□ -0.19
PRPF38A-201ENST00000257181 LBRQ14739 615 aaKnown RBP13.87□□□□□ -0.19
PRPF38A-201ENST00000257181 LRP10Q7Z4F1 713 aa13.87□□□□□ -0.19
PRPF38A-201ENST00000257181 PATL1Q86TB9 770 aaKnown RBP13.87□□□□□ -0.19
PRPF38A-201ENST00000257181 TTC30BQ8N4P2 665 aa13.87□□□□□ -0.19
PRPF38A-201ENST00000257181 SLC22A17Q8WUG5 538 aa13.87□□□□□ -0.19
PRPF38A-201ENST00000257181 MYCBPQ99417 103 aaPredicted RBP13.87□□□□□ -0.19
PRPF38A-201ENST00000257181 FBXO10Q9UK96 956 aa13.87□□□□□ -0.19
PRPF38A-201ENST00000257181 MAN2B1O00754 1011 aa13.87□□□□□ -0.19
PRPF38A-201ENST00000257181 PYGMP11217 842 aa13.87□□□□□ -0.19
PRPF38A-201ENST00000257181 GFPT1Q06210 699 aaPredicted RBP13.87□□□□□ -0.19
PRPF38A-201ENST00000257181 CCNG2Q16589 344 aa13.87□□□□□ -0.19
PRPF38A-201ENST00000257181 ARMC12Q5T9G4 340 aa13.87□□□□□ -0.19
PRPF38A-201ENST00000257181 C1orf186Q6ZWK4 172 aa13.87□□□□□ -0.19
PRPF38A-201ENST00000257181 TRMT10CQ7L0Y3 403 aaKnown RBP13.87□□□□□ -0.19
PRPF38A-201ENST00000257181 FAR2Q96K12 515 aa13.87□□□□□ -0.19
PRPF38A-201ENST00000257181 RNPEPQ9H4A4 650 aa13.87□□□□□ -0.19
PRPF38A-201ENST00000257181 INTS7Q9NVH2 962 aaKnown RBP13.87□□□□□ -0.19
PRPF38A-201ENST00000257181 STX18Q9P2W9 335 aaKnown RBP13.87□□□□□ -0.19
PRPF38A-201ENST00000257181 DEC1Q9P2X7 70 aa13.87□□□□□ -0.19
PRPF38A-201ENST00000257181 TSPAN16Q9UKR8 245 aa13.87□□□□□ -0.19
PRPF38A-201ENST00000257181 FAM95CA0A1B0GW59 222 aa13.87□□□□□ -0.19
PRPF38A-201ENST00000257181 SLC12A3P55017 1021 aa13.87□□□□□ -0.19
PRPF38A-201ENST00000257181 SH3BGRP55822 239 aaPredicted RBP13.87□□□□□ -0.19
PRPF38A-201ENST00000257181 CENPPQ6IPU0 288 aa13.87□□□□□ -0.19
PRPF38A-201ENST00000257181 LPCAT2Q7L5N7 544 aa13.87□□□□□ -0.19
PRPF38A-201ENST00000257181 TCF25Q9BQ70 676 aa13.87□□□□□ -0.19
PRPF38A-201ENST00000257181 CDT1Q9H211 546 aa13.87□□□□□ -0.19
PRPF38A-201ENST00000257181 ZMYND8Q9ULU4 1186 aaPredicted RBP13.87□□□□□ -0.19
PRPF38A-201ENST00000257181 A0A087WWV3 80 aa13.86□□□□□ -0.19
PRPF38A-201ENST00000257181 PSMA3P25788 255 aa13.86□□□□□ -0.19
PRPF38A-201ENST00000257181 RPIAP49247 311 aa13.86□□□□□ -0.19
PRPF38A-201ENST00000257181 OCRLQ01968 901 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms